BAC Information

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BAC

Clone NameB6Ng01-132D10
Chromosome17 (Build37)
Map Location 28,025,431 - 28,026,498
singlet/doubletsinglet
Overlap geneF830021D11Rik
Upstream geneKifc1, Phf1, Cuta, Syngap1, Zbtb9, Bak1, Ggnbp1, Itpr3, 2900010M23Rik, Ihpk3, Lemd2, LOC100042713, ENSMUSG00000073430, Grm4, LOC677010, Hmga1, AI413582, Nudt3, Rps10, Pacsin1, Spdef, LOC100042744, D17Wsu92e, EG666682, Snrpc
Downstream geneTaf11, Anks1, Tcp11, 4930526A20Rik, Scube3, LOC100042764, Zfp523, Def6, Ppard, 1810013A23Rik, Fance, Rpl10a, Tead3, Tulp1, Fkbp5, 4930511I11Rik, Gm749, Clps, Tmhs, Srpk1, Slc26a8, Mapk14, LOC100043318, Mapk13, Brpf3, Pnpla1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-132D10.g
ACCDH933074
length1,057
definitionDH933074|Mus musculus domesticus DNA, BAC clone: B6Ng01-132D10, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcagtgggtaaagacctggcacacagggcccttcagtctggtgtta
tcgcaccactggtaccccttcgtatgtgtgtgtgctgatgtgtgtgcgcc
tgtgcctgtcaacagatgcacgtgaagaccaggcatctccctcaactgca
gatctggtctcctcttcactagtgctaacgttacaggcatatggtcagct
ttcttttctgttcaccctgggaaaccaaccaggccatctccccaggcccc
acagatcctttgccgtttcctctcctccgtccttggctgactgcccttgc
aggcacacttaggacaattcatacagaagaaagctccaaggagcggggga
gatggtgcctcagctaaagcagctgccacccaagtatgaggaccagagtt
cagatcccaagagcccaccaaacgccagtggacacggcatcccaccgcta
agtcaggcttggaaggcagagacaggcaagctacctagctagacttcatg
gataggtgagctcggggtttgccttaagaggttctgcctcagcaggtcag
gaggcagagtgatccggaatgattccaaacaccaccgtagccctccacac
acacacacacacacacacacacacacacacacagagtgatccggaatgat
tccaaacaccaccgtagccctccacacacacacacacacacacacacaca
cacagagtgatccggaatgattccaaacaccaccgtagccctccacacac
acacacacacacacacacacacacgtacactcacaaaacatgagaaaagg
aggactggagagctggctctggttaagagccctggctgctcttccaaaag
acctgagatcattcccagcacccagacagtggctcacaaccatctgtaac
ccaaccccagaggatttgagccctgttctggtcttcttgcgggtaaaaca
ccctacacaaaaggaaataatggttttattcaggaagaatacaaggtcta
ctcctcagctgtggagtcaccccaccctctcgggaaggcttctcacgctg
cactgtc
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_28025431_28026498
seq2: B6Ng01-132D10.g_71_1127 (reverse)

seq1  GACAGTGCAGCGTGAGGAGCCTCTCCTGGGGTGTTGGGTGACT-CACAGG  49
      |||||||||||||||| |||||  ||  | | || |||||||| |||| |
seq2  GACAGTGCAGCGTGAGAAGCCTTCCCGAGAGGGTGGGGTGACTCCACA-G  49

seq1  CTGAGGAGTTAGAGCTTTGTATTTCTTCCTGAATTAAATACATTTATTTC  99
      |||||||| |||| | ||||| ||||||||||||  || ||  |||||||
seq2  CTGAGGAG-TAGA-CCTTGTA-TTCTTCCTGAAT--AAAACCATTATTTC  94

seq1  TTTTTGTGTATGGGTGTTTTTACCCTGCAAGAAGGCCAGAACAGGGCATC  149
       ||||||||| ||||| |||||||| |||||||| |||||||||||| ||
seq2  CTTTTGTGTA-GGGTG-TTTTACCC-GCAAGAAGACCAGAACAGGGC-TC  140

seq1  AAATCCTCTGGGGTTGGGTTTACAGATGGTTGTGAGCCACTGTCTGGGTG  199
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  AAATCCTCTGGGGTTGGG-TTACAGATGGTTGTGAGCCACTGTCTGGGTG  189

seq1  CTGGGAATTGATCTCAGGTCTTTTGGAAGAGCAGCCAGGGCTCTTAACCA  249
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGAA-TGATCTCAGGTCTTTTGGAAGAGCAGCCAGGGCTCTTAACCA  238

seq1  GAGCCAGCTCTCCAGTCCT-CATTTCTCATGTTCTTGTGAGTGTACGTGT  298
      ||||||||||||||||||| | ||||||||||| ||||||||||||||||
seq2  GAGCCAGCTCTCCAGTCCTCCTTTTCTCATGTT-TTGTGAGTGTACGTGT  287

seq1  GTGTGTGTGTGTGTGTGTGTGTGTGTGGAGGGCTACGGTGGTGTTTGGAA  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTGTGTGTGTGTGTGTGTGTGTGGAGGGCTACGGTGGTGTTTGGAA  337

seq1  TCATTCCGGATCACTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGA  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTCCGGATCACTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGA  387

seq1  GGGCTACGGTGGTGTTTGGAATCATTCCGGATCACTCTGTGTGTGTGTGT  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCTACGGTGGTGTTTGGAATCATTCCGGATCACTCTGTGTGTGTGTGT  437

seq1  GTGTGTGTGTGTGTGTGTGTGTGTGGAGGGCTACGGTGGTGTTTGGAATC  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTGTGTGTGTGTGTGTGTGTGGAGGGCTACGGTGGTGTTTGGAATC  487

seq1  ATTCCGGATCACTCTGCCTCCTGACCTGCTGAGGCAGAACCTCTTAAGGC  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCGGATCACTCTGCCTCCTGACCTGCTGAGGCAGAACCTCTTAAGGC  537

seq1  AAACCCCGAGCTCACCTATCCATGAAGTCTAGCTAGGTAGCTTGCCTGTC  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCCCGAGCTCACCTATCCATGAAGTCTAGCTAGGTAGCTTGCCTGTC  587

seq1  TCTGCCTTCCAAGCCTGACTTAGCGGTGGGATGCCGTGTCCACTGGCGTT  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCCTTCCAAGCCTGACTTAGCGGTGGGATGCCGTGTCCACTGGCGTT  637

seq1  TGGTGGGCTCTTGGGATCTGAACTCTGGTCCTCATACTTGGGTGGCAGCT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGGGCTCTTGGGATCTGAACTCTGGTCCTCATACTTGGGTGGCAGCT  687

seq1  GCTTTAGCTGAGGCACCATCTCCCCCGCTCCTTGGAGCTTTCTTCTGTAT  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTAGCTGAGGCACCATCTCCCCCGCTCCTTGGAGCTTTCTTCTGTAT  737

seq1  GAATTGTCCTAAGTGTGCCTGCAAGGGCAGTCAGCCAAGGACGGAGGAGA  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTGTCCTAAGTGTGCCTGCAAGGGCAGTCAGCCAAGGACGGAGGAGA  787

seq1  GGAAACGGCAAAGGATCTGTGGGGCCTGGGGAGATGGCCTGGTTGGTTTC  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAACGGCAAAGGATCTGTGGGGCCTGGGGAGATGGCCTGGTTGGTTTC  837

seq1  CCAGGGTGAACAGAAAAGAAAGCTGACCATATGCCTGTAACGTTAGCACT  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGGTGAACAGAAAAGAAAGCTGACCATATGCCTGTAACGTTAGCACT  887

seq1  AGTGAAGAGGAGACCAGATCTGCAGTTGAGGGAGATGCCTGGTCTTCACG  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGAAGAGGAGACCAGATCTGCAGTTGAGGGAGATGCCTGGTCTTCACG  937

seq1  TGCATCTGTTGACAGGCACAGGCGCACACACATCAGCACACACACATACG  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATCTGTTGACAGGCACAGGCGCACACACATCAGCACACACACATACG  987

seq1  AAGGGGTACCAGTGGTGCGATAACACCAGACTGAAGGGCCCTGTGTGCCA  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGGTACCAGTGGTGCGATAACACCAGACTGAAGGGCCCTGTGTGCCA  1037

seq1  GGTCTTTACCCACTGAATTC  1068
      ||||||||||||||||||||
seq2  GGTCTTTACCCACTGAATTC  1057