BAC Information

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BAC

Clone NameB6Ng01-137B21
Chromosome17 (Build37)
Map Location 22,072,210 - 22,073,298
singlet/doubletsinglet
Overlap gene3110048L19Rik
Upstream genePpp2r1a, V1rf5, Zfp160, LOC627912, LOC435509, EG627924, 4933430A09, EG665654, EG665662, LOC665666, EG665669, V1rf1, V1rf2, V1rf4, V1rf3, A830058L05Rik, Zfp54, Zfp51, Zfp53, LOC100042508, Zfp52, BC049807, Zfp760, BC043476, 4930515G13Rik, 2610036F08Rik, LOC624960
Downstream gene4930432O21Rik, LOC665820, LOC665825, LOC674332, LOC631010, EG665844, EG210853, LOC671007, EG240038, EG631624, 6330416L07Rik, Zfp758, 1300003B13Rik, EG210876, LOC100042656, EG628185, ENSMUSG00000046088, EG383218, EG433078, LOC100042679, A630033E08Rik, LOC671128, LOC665961
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-137B21.bB6Ng01-137B21.g
ACCDH936715DH936716
length1,1191,070
definitionDH936715|Mus musculus domesticus DNA, BAC clone: B6Ng01-137B21, 5' end.DH936716|Mus musculus domesticus DNA, BAC clone: B6Ng01-137B21, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgtttagctctgagcccaattttttaatggggttatttgatt
ttctggagttcaccttcttgagttctttatatatattggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggcct
ttttgtcttattgacggtgtcttttgccttgcagaagctttgcagtttca
tgaggtcccatttgtcaattctcgatcttacagcacaagctattactgtt
ctattcaggaatttttcccctgtgcccatatcttccagcctttcccccac
tttctcctctataagtttcagtgtttctggttttatgtggagttccttga
tccacttagatttgaccttagtacaaggagataggaatggatcaattcgc
attcttctacacgataaccaccagttttgccagcaccatttgttgaaaat
gctgtctttcttccactggatggttttagctcccttgtcgaggatcaagt
gaccataggtgtgtgggttcatttctgggtcttcaattctattccattgg
tctacctgtctgtcactataccagtaacatgcagtttttatcacaattgc
tctgtagtaaagttttaagtcaggcatggtgattccgccagaggttcttt
tatccttgagaagagtttttgctatgctagcttttttgttattccagatg
aatttgcagattgctctttctaattcgttgaagaattgagttggaatttt
gatggggattgcattgaatctgtagattgcttttggcaagatagccattt
ttacaatgttgatcctgccaatccatgagcatgggagatcttttccatct
atgagatatttaatttctttcttcagagacttgaagtttttatcatacag
atcttttcacttccttagttagagtcatgcccagatatttatatttgtga
ctattgagaagggtgttgtttcccttaatttctttctcagctgttatcct
ttgtgtacagaaaggcaattgacttgtttgagtatttatatccagctact
tcacgaagcttttatcagttaggagtcctgggtgaaatttaggtcactta
aataaccatcataatcact
gaattctccagtttgttcagaaaaacctgtaatagtgctgcacagagaat
attgcacacaaagctggctttaccttgatataaaaaggagatgagaaaaa
aaaaagattttcaaagaaaaaaaaatcatagaccagttgcaaggatgtac
atggcaaagagattctctctaatgaatccagaaagggaactcaacttgat
tttatgtcaaggttgcaaaactgtttcagtatcacataccaaataactta
cggcaaaaaatatgtcagggacagaagccacacaaccatgtcaatatatc
catgaaagacatggggcaaaacagcacattgactcaatatgaaagcactg
aagaaagaatgtgagaacagaaagaacataactcatcataatcaagacag
tagccaacaacctaaatctgtccttacaaaatttgaagacagatgtcatt
attgtactatacaaagcatgacaaggataggtaggctatgcctcaacact
aattcatcacagtgcaacagtgcttacaaagagaaagtaagacatataac
actttcaatgtgttaaataagagtatgaggaagacatatttttccaaatt
tcatgatttgggaaacataattcttcaattcaaaaactaaaaatatccca
caagaaagttcaaatctgataatactcttaatatgctatataaaactaca
agaaaatatcacttggttttatatatccccagggaaaatgctgagaagtc
agcagatcactcattgtctaaaaatactggtgtagcattcatattgttaa
aaggactctgtaggttgctgggcaaagagaatcatcagtggctctcctca
gatgctgattcctagtgctgcaacaccatcctgtccagcaatgtatgccc
accagaggatatggccagattttgtaatgacagaagcctttctggtttga
ctaggtagctcataaagaaatcatagctggtactagatgccagctagtca
tgactggaaaatcacagcccaggatgggattctatgactatagatcccat
atggtacatgtcagatactg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_22072210_22073298
seq2: B6Ng01-137B21.g_67_1136

seq1  GAATTCTCCAGTTTGTTCAGAAAAACCTGTAATAGTGCTGCACAGAGAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCCAGTTTGTTCAGAAAAACCTGTAATAGTGCTGCACAGAGAAT  50

seq1  ATTGCACACAAAGCTGGCTTTACCTTGATATAAAAAGGAGATGAGAAAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGCACACAAAGCTGGCTTTACCTTGATATAAAAAGGAGATGAGAAAAA  100

seq1  AAAAAGATTTTCAAAGAAAAAAAAATCATAGACCAGTTGCAAGGATGTAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAGATTTTCAAAGAAAAAAAAATCATAGACCAGTTGCAAGGATGTAC  150

seq1  ATGGCAAAGAGATTCTCTCTAATGAATCCAGAAAGGGAACTCAACTTGAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGCAAAGAGATTCTCTCTAATGAATCCAGAAAGGGAACTCAACTTGAT  200

seq1  TTTATGTCAAGGTTGCAAAACTGTTTCAGTATCACATACCAAATAACTTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATGTCAAGGTTGCAAAACTGTTTCAGTATCACATACCAAATAACTTA  250

seq1  CGGCAAAAAATATGTCAGGGACAGAAGCCACACAACCATGTCAATATATC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGCAAAAAATATGTCAGGGACAGAAGCCACACAACCATGTCAATATATC  300

seq1  CATGAAAGACATGGGGCAAAACAGCACATTGACTCAATATGAAAGCACTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGAAAGACATGGGGCAAAACAGCACATTGACTCAATATGAAAGCACTG  350

seq1  AAGAAAGAATGTGAGAACAGAAAGAACATAACTCATCATAATCAAGACAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAAGAATGTGAGAACAGAAAGAACATAACTCATCATAATCAAGACAG  400

seq1  TAGCCAACAACCTAAATCTGTCCTTACAAAATTTGAAGACAGATGTCATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCCAACAACCTAAATCTGTCCTTACAAAATTTGAAGACAGATGTCATT  450

seq1  ATTGTACTATACAAAGCATGACAAGGATAGGTAGGCTATGCCTCAACACT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTACTATACAAAGCATGACAAGGATAGGTAGGCTATGCCTCAACACT  500

seq1  AATTCATCACAGTGCAACAGTGCTTACAAAGAGAAAGTAAGACATATAAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCATCACAGTGCAACAGTGCTTACAAAGAGAAAGTAAGACATATAAC  550

seq1  ACTTTCAATGTGTTAAATAAGAGTATGAGGAAGACATATTTTTCCAAATT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTCAATGTGTTAAATAAGAGTATGAGGAAGACATATTTTTCCAAATT  600

seq1  TCATGATTTGGGAAACATAATTCTTCAATTCAAAAACTAAAAATATCCCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGATTTGGGAAACATAATTCTTCAATTCAAAAACTAAAAATATCCCA  650

seq1  CAAGAAAGTTCAAATCTGATAATACTCTTAATATGCTATATAAAACTACA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGAAAGTTCAAATCTGATAATACTCTTAATATGCTATATAAAACTACA  700

seq1  AGAAAATATCACTTGGTTTTATATATCCCCAGGGAAAATGCTGAGAAGTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAATATCACTTGGTTTTATATATCCCCAGGGAAAATGCTGAGAAGTC  750

seq1  AGCAGATCACTCATTGTCTAAAAATACTGGTGTAGCATTCATATTGTTAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGATCACTCATTGTCTAAAAATACTGGTGTAGCATTCATATTGTTAA  800

seq1  AAGGACTCTGTAGGTTGCTGGGCAAAGAGAATCATCAGTGGCTCTCCTCA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGACTCTGTAGGTTGCTGGGCAAAGAGAATCATCAGTGGCTCTCCTCA  850

seq1  GATGCTGATTCCTAGTGCTGCAACACCATCCTGTCCAGCAATGTATGCCC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGCTGATTCCTAGTGCTGCAACACCATCCTGTCCAGCAATGTATGCCC  900

seq1  ACCAGAGGAATATGGCCAAGATTTTTGTAAATGACAGAAGCCTTTCTGGT  950
      |||||||| |||||||| ||| |||||| |||||||||||||||||||||
seq2  ACCAGAGG-ATATGGCC-AGA-TTTTGT-AATGACAGAAGCCTTTCTGGT  946

seq1  TTGAACTAAGGTTAGCCCATAAAGGAAATTCATAGCTGGTACTAGATGCC  1000
      ||| ||||  | |||| |||||||  || |||||||||||||||||||||
seq2  TTG-ACTA--GGTAGCTCATAAAG--AAATCATAGCTGGTACTAGATGCC  991

seq1  AGCTAAGTCAATGACTGGAAAAAATCACAGGCCCAGGATGGGATTCTATG  1050
      |||| |||| ||||||||  ||||||||| ||||||||||||||||||||
seq2  AGCT-AGTC-ATGACTGG--AAAATCACA-GCCCAGGATGGGATTCTATG  1036

seq1  ACTAATAGAATCCCATTATGGGTACATGTCAGAATACTG  1089
      ||| |||| |||||| ||| |||||||||||| ||||||
seq2  ACT-ATAG-ATCCCA-TAT-GGTACATGTCAG-ATACTG  1070