MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-139H05
Chromosome	17 (Build37)
Map Location	11,118,913 - 11,119,977
singlet/doublet	singlet
Overlap gene	Park2
Upstream gene	Qk, LOC675815, Pacrg, LOC100041113
Downstream gene	none
Link	Open Mouse BAC browser

Click to get alignment info.

name	Qk (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:19317 MGI:97837
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC675815 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:675815
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 8 ESTs, 1 Protein

name	Pacrg (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:69310 MGI:1916560
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Park2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:50873 MGI:1355296
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100041113 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041113
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein pseudo : _no_value

name	Qk (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:11527387 GeneID:19317 MGI:97837
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : quaking transcript_id : NM_021881.1

name	LOC675815 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149268406 GeneID:675815
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 8 ESTs, 1 Protein product : similar to quaking type II transcript_id : XM_001475482.1

name	Pacrg (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:117676372 GeneID:69310 MGI:1916560
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : Park2 co-regulated transcript_id : NM_027032.2

name	Park2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118131140 GeneID:50873 MGI:1355296
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : parkin transcript_id : NM_016694.3

name	Qk (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:11527388 CCDS:CCDS28387.1 GeneID:19317 MGI:97837
definition	GO_component : GO:0005737 - cytoplasm [Evidence TAS]; GO:0005634 - nucleus [Evidence TAS] GO_function : GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0003723 - RNA binding [Evidence TAS] GO_process : GO:0008366 - axon ensheathment [Evidence IMP]; GO:0030154 - cell differentiation [Evidence IEA]; GO:0007275 - development [Evidence IEA]; GO:0042759 - long-chain fatty acid biosynthesis [Evidence IMP]; GO:0006406 - mRNA export from nucleus [Evidence IEA]; GO:0006397 - mRNA processing [Evidence IEA]; GO:0042692 - muscle cell differentiation [Evidence IMP]; GO:0042552 - myelination [Evidence IMP]; GO:0000398 - nuclear mRNA splicing, via spliceosome [Evidence IEA]; GO:0006417 - regulation of protein biosynthesis [Evidence IEA]; GO:0006445 - regulation of translation [Evidence IEA]; GO:0007283 - spermatogenesis [Evidence IMP]; GO:0006810 - transport [Evidence IEA]; GO:0001570 - vasculogenesis [Evidence IMP] codon_start : 1 note : lethal, Chr 17, U Wisconsin 1; QKI-5 protein product : quaking protein protein_id : NP_068681.1

name	LOC675815 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149268407 GeneID:675815
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001475532.1

name	Pacrg (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:66392180 CCDS:CCDS28388.1 GeneID:69310 MGI:1916560
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 product : parkin co-regulated gene protein protein_id : NP_081308.1

name	Park2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:7710078 GeneID:50873 MGI:1355296
definition	GO_component : GO:0005783 - endoplasmic reticulum [Evidence IEA]; GO:0043005 - neuron projection [Evidence IDA] GO_function : GO:0016874 - ligase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0042417 - dopamine metabolism [Evidence IMP]; GO:0051583 - dopamine uptake [Evidence IMP]; GO:0007612 - learning [Evidence IMP]; GO:0007626 - locomotory behavior [Evidence IMP]; GO:0042415 - norepinephrine metabolism [Evidence IMP]; GO:0019538 - protein metabolism [Evidence IMP]; GO:0006464 - protein modification [Evidence IEA]; GO:0046928 - regulation of neurotransmitter secretion [Evidence IMP]; GO:0050804 - regulation of synaptic transmission [Evidence IMP]; GO:0001964 - startle response [Evidence IMP]; GO:0001963 - synaptic transmission, dopaminergic [Evidence IMP]; GO:0035249 - synaptic transmission, glutamatergic [Evidence IMP] codon_start : 1 note : parkin protein; Partial coding sequence representing amino acids 206-243; Homologous to GI:7710078. Partial coding sequence amino acids 58-178 product : parkin protein_id : NP_057903.1

name	LOC100041113 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041113
definition	number : 1 pseudo : _no_value

clone name	MSMg01-458O11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-519G20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-046K12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-119G15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-491N14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-075O21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-080E08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-118L16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-070E13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-392N14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-183B23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-545D14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-464O19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-496D10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-522D22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-300J23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-345C08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-378E16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-125H23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-128I19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-338L06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-102F14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-367E24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-417D23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-462J22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-144E04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-183D11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-143P13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-201E20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-502A06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-395H14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-268D20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-366L17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-520A19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-086J09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-276B22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-463O10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-100F10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-300D12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-145G15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-125A02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-088O06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-492F19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-385P11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-143C16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-442I01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-109E12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-292E17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-367A18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-455I07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-385A14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-232A06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-477F05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-540E19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-186C07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-401O11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-494H09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-539J07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-522A11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-349C16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-457N14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-316N19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-521B02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-475H20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-394D03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-460F08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-263A04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-101N03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-479K05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-430P09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-212G11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-547G19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-516L12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-148M05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-071C04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-538J13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-096B14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-301K19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-092N21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-475I12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-292A17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-291K20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-471C07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-444M09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-378F08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-399H14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-320H16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-166L23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-361L03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-318K20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-156H24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-060G09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-153O11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-191J21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-354B07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-294A16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-134D20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-339A10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-266M22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-227A18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-300P18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-342J16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-122G18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-057F19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-140M10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-271I02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-342N14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-165A20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-126C15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-304A17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-188E24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-068N18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-285I22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-064H13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-112E09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-216E11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-015C14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-025A18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-118I11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-226J24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-140L03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-337A20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-131A18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-144H10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-280I17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-168N06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-125A02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-128N13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-227H16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-294K02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-088H09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-167F03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-174C17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-291J16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-246M04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-343F10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-139H05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-263D20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-255A09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-012I21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-138C07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-236J16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-124L15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-299E10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-337P12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-082I22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-205C04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-213H11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-296O21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-276P08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-321B21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-260P05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-261F24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-290F16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-007N06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-325L12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-262K10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-012N06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-069B19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-327D19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-328A19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-155G05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-076N11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-143B18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-251D05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-075B22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-296B14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-116N01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-275O04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-205D17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-292H03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-037F19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-071I15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-042P14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-250G17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-208K15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-299N20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-084C23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-216E18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-023B01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-246E13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-246G14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-046D18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-219J06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-015O13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-186K10
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-139H05.b	B6Ng01-139H05.g
ACC	DH938428	DH938429
length	1,048	951
definition	DH938428\|Mus musculus domesticus DNA, BAC clone: B6Ng01-139H05, 5' end.	DH938429\|Mus musculus domesticus DNA, BAC clone: B6Ng01-139H05, 3' end.
singlet/doublet	singlet	---
BLAST hit	unique	no hit data
sequence	gaattctccagaatttgtatggcctgagtcagttcaggagttttatactc tgcagacattcttgtgacttaactagggaagtgatggtgggcactcacat gtcactatgtcactgacatgctgctgcgtacactcacatgctgatgacct ggtgggagagggtgaagctccctctgcctgtctctgatcatgctgtttgc tgttgaccaggctgctgactagctattgcttctggctggtgttctactgt ccaccttgccactgttttggccttgtggctgtcaaccaatttttcgtttt tccacaagcatgtggccaacttattggttctattactactgatggaaagc tagcactttcctctgtattatatatgatggtattttctatttaatttgag tctatttcattttcaaaattcaatatctataacctagaaatgtataagaa cttataattttgaaacactggactacatatgttaaaggttcacattttgt gtaaaaccttatttcaagaatataagaatattctttcttattagccaaga tagatataacccttgtgctaaacactcagtggtcaccaaaagtcaacaag agacaatgactttcaagtccattgtcttgagctggtgataattaaagata tgtacatgttggggattagttctaatgctttgaattaatctaccccccaa aattgggaatctgcatgtccaaatgctgaatgaaggtccttgtccccagt cagttttggtcaattaataaaaagccaacagccaatggctgggcagtaaa ctgaggtggaaccttgagatttgcatgggctagaaattggggaaaaaaga gagaaatcaccatcggcaggaaagaagaaaggcagatgcaaatgccagcc accacgtgagatcaggaaagtggttacacagccacttccctgatagggtg tgcagtagtagagatgaataagagttttaagaataactctggatactgga ggggagtagtgtttgctttcggtaggattagactgcccagctttgagc	gaattcaggtacacagtaaaatgcttcgtggtgtttttatggatacttac tagcagttgacagtaaaagaaccagacatggtctgcccttaaggaactca ggactactccagggtgtgtactagaggagaaggcagtgccaggcattatg gatggaattctttcccctaattccctgcagtaaaggcctagtctccagaa cctctgaaggcagttgcccttggagaaaatgccttcatgaagggaagtac cttaaaatgtggtagttaatgggcactggttgcatctgattaatctaata aagtgagaacacagaatgttcagacaccagggaaatgcattcagggaagg aagagaagagcttagccatctgcaagccgaagacaaaaggtcttaaggaa aagtctaacttgaccacaccctcatgcagcatctagaactgaaagaaggc atcagtctgtaaacattctggaacatcatccagaatgttccactaggaaa ggaatgcaccaggaatataaatccaactacacagcaacagatgacttcaa agaaacagaggaaggacgggtaatcaaaaagtagtgagcccttcctgatg cccatgctcacacatgattagaaaccaggattcacatgaatgccaactgc tccttgataaaggattttgcccaattcactttgattctaacactaggtac tgagcccttgtagcccccctcagccttgaagcagctggtccagactttga ccttgctgccactaagaagattacctagggtggagccttccaacctagat ggctctattgttctgtcaccagccactgctctcctcccagacactgctac ctgctgagagcccctgagttattccagaggaacatcctatcctgcatgtc acctgcaggctggctcaaacaccaagaatggactgggggggtggggtgtt g
quality values	Open. Hide. 61 38 29 27 61 47 52 61 36 14 47 61 55 55 61 47 35 55 55 43 61 47 61 61 11 12 9 7 11 8 5 7 10 13 14 14 27 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 61 61 59 41 38 43 28 24 23 26 28 23 29 55 55 59 61 59 59 61 61 59 61 59 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 59 61 59 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 59 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 55 55 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 55 52 49 55 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 55 61 55 55 50 55 61 61 61 61 61 61 61 61 61 61 55 61 61 55 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 47 32 61 61 61 47 61 53 61 61 53 43 61 61 61 50 61 50 53 61 53 61 61 61 61 45 61 53 61 43 52 61 61 61 61 61 50 61 61 61 47 47 53 50 50 35 50 50 61 61 61 61 61 61 61 50 61 50 61 40 53 61 61 52 43 42 61 42 53 61 50 61 61 39 61 61 53 47 53 61 39 47 50 45 61 61 61 61 61 53 47 61 61 61 61 47 61 52 50 38 27 47 47 38 47 53 30 42 53 57 43 53 57 53 57 47 45 52 53 57 42 19 47 53 42 57 52 42 53 50 46 57 53 45 29 53 53 45 45 45 46 38 52 57 47 38 47 57 57 47 43 30 32 39 32 30 40 40 47 39 47 42 57 36 53 57 53 42 35 27 19 53 47 50 50 47 42 45 45 57 53 53 53 53 31 15 17 11 17 22 28 47 37 26 20 37 53 27 34 37 12 50 52 28 38 37 39 50 38 50 45 30 40 39 39 16 29 36 52 38 32 45 20 32 50 27 50 53 32 40 52 52 50 23 45 25 38 27 12 13 38 53 39 46 38 24 42 42 40 38 42 50 32 21 20 57 57 57 22 22 29 53 33 40 36 37 22 20 26 13 22 19 53 33 31 48 36 57 37 29 7 10 10 8 16 33 35 24 40 23 29 20 20 32 37 41 41 24 20 5 21 33 41 14 41 23 44 32 14 19 25 40 53 53 33 30 30 26 28 46 46 46 29 38 38 44 47 13 48 47 45 45 47 25 9 41 10 32 14 31 47 33 27 20 19 21 47 23 34 39 31 31 37 16 7 21 23 47 32 21 32 26 6 23 36 27 13 10 17 8 5 29 23 34 27 11 29 20 29 38 25 9 8 5 10 12 8 31 33 22 23 9 21 11 9 17 46 11 23 10 22 30 27 51 32 20 20 33 41 24 30 13 10 5 21 8 30 9 22 10 9 13 28 29 51 31 17 30 34 11 7 12 21 22 6 23 15 33 28 18 15 7 14 9 5 11 5 22 11 41 10 10 38 39 16 9 17 9 12 22 28 51 51 17 25 13 13 14 6 16 13 18 21 25 25 16 18 9 19 16 14 28 17 36 15 29 8 51 51 19 16 14 16 7 6 13 30 10 39 13 19 21 23 35 11 10 7 5 19 31 14 7 13 9 8 10 3 13 23 14 19 12 33 27 23 6 6 3 29 23 12 18 6 9	Open. Hide. 55 61 52 55 13 11 10 11 19 18 10 13 13 13 21 50 49 59 59 61 61 59 59 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 43 34 45 26 25 18 30 28 36 39 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 59 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 55 61 61 61 61 61 61 61 61 61 55 55 61 61 61 61 55 61 61 52 61 55 55 61 61 61 52 55 61 55 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 55 61 55 55 50 61 50 55 61 61 61 55 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 50 55 55 55 55 61 61 61 61 61 61 53 61 61 61 61 61 61 61 61 61 61 61 61 61 50 61 61 61 61 47 47 43 50 53 50 45 39 53 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 53 53 53 61 61 50 61 53 53 47 32 61 61 61 61 52 53 61 47 42 53 61 61 61 61 61 61 61 53 61 61 47 47 61 61 47 61 61 61 43 47 53 53 53 52 53 53 57 53 53 52 53 45 53 53 53 53 57 52 53 52 53 53 53 43 57 43 53 47 52 53 42 53 53 52 47 34 53 53 57 57 57 47 57 47 53 57 34 57 57 53 52 57 53 45 45 53 47 47 53 53 53 53 21 46 53 57 57 53 38 53 33 57 57 53 53 53 53 53 52 52 53 46 47 53 41 27 52 53 47 47 38 53 57 57 53 53 38 53 45 53 45 53 52 34 28 57 57 41 57 52 52 52 31 37 38 47 29 17 53 37 45 45 45 53 52 53 53 50 53 53 33 34 53 53 53 57 53 50 30 53 52 53 37 52 34 20 57 50 39 53 42 31 52 57 52 40 42 53 39 33 52 53 38 31 42 41 51 57 39 53 42 41 37 47 33 36 43 40 27 44 40 32 37 39 15 37 37 31 52 45 36 45 35 35 17 38 53 37 40 36 44 57 53 57 53 32 37 30 34 23 18 44 36 38 37 40 29 21 33 6 9 11 40 32 44 35 44 37 21 33 43 23 19 57 31 29 31 23 30 36 48 30 27 29 38 14 44 16 30 30 44 46 14 44 44 27 29 16 35 32 37 21 22 28 30 51 29 19 27 10 32 16 29 29 31 38 31 39 19 17 29 36 37 35 20 35 24 31 25 17 41 29 37 28 32 16 38 9 46 29 29 32 29 28 17 9 11 15 24 29 37 24 29 22 28 28 27 20 26 24 26 25 10 13 10 29 27 30 14 20 20 29 34 24 28 28 21 36 26 36 14 29 15 21 8 19 21 8 24 30 20 21 16 24 17 35 28 11 31 17 21 19 20 13 41 14 17 28 27 21 20 28 25 43 28 31 28 21 31 30 34 12 12 28 27 14 22 16 20 23 21 31 22 23 23 24 16 24 19 33 10 20 12 7 31 34 28 24 30 28 20 24 15 31 28 9 16 13 5 10 16 13 20 11 26 26 26 10 5 18 24 21 6 5 7 5 7 5

Alignment Information

BAC End 1

BAC End 2

seq1: chr17_11118913_11119977
seq2: B6Ng01-139H05.b_45_1092

seq1  GAATTCTCCAGAATTTGTATGGCCTGAGTCAGTTCAGGAGTTTTATACTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCCAGAATTTGTATGGCCTGAGTCAGTTCAGGAGTTTTATACTC  50

seq1  TGCAGACATTCTTGTGACTTAACTAGGGAAGTGATGGTGGGCACTCACAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGACATTCTTGTGACTTAACTAGGGAAGTGATGGTGGGCACTCACAT  100

seq1  GTCACTATGTCACTGACATGCTGCTGCGTACACTCACATGCTGATGACCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCACTATGTCACTGACATGCTGCTGCGTACACTCACATGCTGATGACCT  150

seq1  GGTGGGAGAGGGTGAAGCTCCCTCTGCCTGTCTCTGATCATGCTGTTTGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGGGAGAGGGTGAAGCTCCCTCTGCCTGTCTCTGATCATGCTGTTTGC  200

seq1  TGTTGACCAGGCTGCTGACTAGCTATTGCTTCTGGCTGGTGTTCTACTGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGACCAGGCTGCTGACTAGCTATTGCTTCTGGCTGGTGTTCTACTGT  250

seq1  CCACCTTGCCACTGTTTTGGCCTTGTGGCTGTCAACCAATTTTTCGTTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCTTGCCACTGTTTTGGCCTTGTGGCTGTCAACCAATTTTTCGTTTT  300

seq1  TCCACAAGCATGTGGCCAACTTATTGGTTCTATTACTACTGATGGAAAGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACAAGCATGTGGCCAACTTATTGGTTCTATTACTACTGATGGAAAGC  350

seq1  TAGCACTTTCCTCTGTATTATATATGATGGTATTTTCTATTTAATTTGAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCACTTTCCTCTGTATTATATATGATGGTATTTTCTATTTAATTTGAG  400

seq1  TCTATTTCATTTTCAAAATTCAATATCTATAACCTAGAAATGTATAAGAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATTTCATTTTCAAAATTCAATATCTATAACCTAGAAATGTATAAGAA  450

seq1  CTTATAATTTTGAAACACTGGACTACATATGTTAAAGGTTCACATTTTGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATAATTTTGAAACACTGGACTACATATGTTAAAGGTTCACATTTTGT  500

seq1  GTAAAACCTTATTTCAAGAATATAAGAATATTCTTTCTTATTAGCCAAGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAAACCTTATTTCAAGAATATAAGAATATTCTTTCTTATTAGCCAAGA  550

seq1  TAGATATAACCCTTGTGCTAAACACTCAGTGGTCACCAAAAGTCAACAAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATATAACCCTTGTGCTAAACACTCAGTGGTCACCAAAAGTCAACAAG  600

seq1  AGACAATGACTTTCAAGTCCATTGTCTTGAGCTGGTGATAATTAAAGATA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAATGACTTTCAAGTCCATTGTCTTGAGCTGGTGATAATTAAAGATA  650

seq1  TGTACATGTTGGGGATTAGTTCTAATGCTTTGAATTAATCTACCCCCCAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTACATGTTGGGGATTAGTTCTAATGCTTTGAATTAATCTACCCCCCAA  700

seq1  AATTGGGAATCTGCATGTCCAAATGCTGAATGAAGGTCCTTGTCCCCAGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGGGAATCTGCATGTCCAAATGCTGAATGAAGGTCCTTGTCCCCAGT  750

seq1  CAGTTTTTGGTCAATTAATAAAAAGCCAACAGCCAATGGCTGGGCAGGTA  800
      ||| |||||||||||||||||||||||||||||||||||||||||| |||
seq2  CAG-TTTTGGTCAATTAATAAAAAGCCAACAGCCAATGGCTGGGCA-GTA  798

seq1  AACTGAGGTGGAACCTTGAGATTTGCATGGGCTAGAAATTGGGAAAAAAA  850
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  AACTGAGGTGGAACCTTGAGATTTGCATGGGCTAGAAATTGGGGAAAAAA  848

seq1  GAGAGAAATCACCATCGGCAGGAAAGAAGAAAGGCCAGATGCAAATGCCA  900
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  GAGAGAAATCACCATCGGCAGGAAAGAAGAAAGG-CAGATGCAAATGCCA  897

seq1  GCCACCACGTGAGAATCAGGGAAAGTGGTTACACAGGCCACTTCCCTGAT  950
      ||||||||||||| |||| |||||||||||||||| ||||||||||||||
seq2  GCCACCACGTGAG-ATCA-GGAAAGTGGTTACACA-GCCACTTCCCTGAT  944

seq1  AGGGTGTGCAGTAGTAGAGATGAAATAGAGAGTTTTAAAGATATTAACTC  1000
      |||||||||||||||||||||| |||| |||||||||   | | ||||||
seq2  AGGGTGTGCAGTAGTAGAGATG-AATA-AGAGTTTTA---AGAATAACTC  989

seq1  TGGAATACTGGAGGGGAGTAGTGTTTGCTTTTCGCGGTAGGATTAGAACT  1050
      ||| |||||||||||||||||||||||||||   |||||||||||| |||
seq2  TGG-ATACTGGAGGGGAGTAGTGTTTGCTTT---CGGTAGGATTAG-ACT  1034

seq1  GCCCAGCCTTTGAGC  1065
      |||||| ||||||||
seq2  GCCCAG-CTTTGAGC  1048

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information