BAC Information

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BAC

Clone NameB6Ng01-144L10
Chromosome17 (Build37)
Map Location 37,534,677 - 37,535,863
singlet/doubletsinglet
Overlap genenone
Upstream geneGm318, LOC100043140, LOC674152, LOC383240, LOC224752, H2-M10.4, H2-M11, LOC667896, H2-M9, LOC620340, H2-M1, LOC667912, LOC100043158, LOC667915, H2-M10.5, H2-M10.6, Trim26, Trim15, Trim10, LOC100043164, Trim40, Trim31, Ppp1r11, Znrd1, 1700022C21Rik, H2-M6-ps, 2410137M14Rik, H2-M4-ps, D130003B22Rik, Zfp57, Mog, Gabbr1, Olfr90, Olfr91, Olfr92, EG224763, LOC667973, Olfr93, Olfr753-ps1, LOC630355, Ubd, Olfr94, Olfr95, Olfr96, Olfr97, Olfr754-ps1, Olfr98, H2-M3, Olfr755-ps1, Olfr99, Olfr756-ps1, Olfr101, Olfr102, Olfr103, Olfr104, GA_x5J8B7W5KGR-1115818-1115257, Olfr105, Olfr758-ps1, Olfr106
Downstream geneOlfr107, Olfr759-ps1, Olfr108, Olfr760-ps1, Olfr109, H2-M2, Olfr110, Olfr111, Olfr112, Olfr113, Olfr114, Olfr115, Olfr116, Olfr117, Olfr118, Olfr119, Scocp, Olfr120, Olfr1558-ps1, Olfr121, Olfr122, Olfr123, Olfr124, Olfr125, LOC672822, Olfr126, Olfr127, Olfr128, Ppia-ps17_697.1, Olfr761, Olfr1552-ps1, LOC100043265, Olfr129, Olfr130, Olfr131, Olfr132, Olfr133, Olfr134, Olfr135, Olfr138, Olfr137, Olfr762-ps1, Olfr136
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-144L10.bB6Ng01-144L10.g
ACCDH942317DH942318
length1,1721,157
definitionDH942317|Mus musculus domesticus DNA, BAC clone: B6Ng01-144L10, 5' end.DH942318|Mus musculus domesticus DNA, BAC clone: B6Ng01-144L10, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcctgatctttccaaaacttttatcatgaatgggtgttggatcttg
tcaaatgctttttctgcatctaacgagatgatcatgtggtttttgtcttt
gagtttgtttatataatggattacattgatggattttcgtatattaaacc
atccctgcatccctggaataaaacctacttggtcaggatggatgatttct
ttaatgtgttcttggattcggttagcgagaattttattaaggatttttgc
atcgatattcataagagaaattggtctgaagttctctatctttgttggat
ctttctgtggtttaggtatcagagtaatagtggcttcataaaatgagttg
ggtagagtaccttctacttctatcttgcgaaatagtttgtgcagaactgg
aattagatcttctttgaaggtctgatagaactctgcactaaacccatctg
gtcctgggatttttttggctgggagactattaataactgcttctatttct
ttaggggatatgggactgtttagaaggtcaacttgatcctgattcaactt
tggtacctggtatctgtccagaaatttgtccatttcgtccaggttttcca
gttttgttgagtataagcttttgtagaaggatctgatggtgttttggatt
tcttcaggatctgttgttatgtctcccttttcatttctggttttgttgat
taggattttgtccctttgccctctagtgagtctagctaagggtttatcta
tcttgttgattttctcaaagaaccaactcctcgtttggttaattctttga
atagttcttcttgttttcacttggttaatttcacccctgagtttgattat
ttcctgccgtctactcctcttgggtgaatttgcttcttttttttctagag
cttttagatgtgtgtcaagctgctagtatgtgcttctcccgttcttcttg
gagtactcagagctatgagtttcctcttagaatgctttcattgtgtccca
aaggtttgggtacgtgtggcttcatttataaactcttaaaagtctttatt
tctttctttatcttccttgaccaggttcatggagagatgtgttcagttcc
acggagttggcttccattctaaggtgtattgagatcaggctagcatggtg
ctgaagagacctggacattcca
gaattcttgttccattctcctaattatttcttattaatttttttaatgaa
tttgtcagtcaataccacagttcatgaatactacagcatactgttcattg
aagttagcttggaatcatatctaactatttgggaacacaagacaatatgt
gaaattattaaaattttatttttctctcgaataaagatgtccagaggttg
gtaatatagagaagatctggtgcactcccaagatcatgagaaaataaagt
ttttgtgtcttctgggtacatacagatacctgctagaactgtgaggttcc
agtaattatcctatttcttctgtccttttaggataataactgagtttaag
aatcaaattgatcatattaacaggaagaaaatgtgtaaattttatctaat
gtatggcataggaggcatcctagggaaacaataatccatgaaagctgtga
gttagagaattagatattagcttcagggacagcgtagactgagctgtgca
taagctactgaattatatagagtttgaaacattggaagtcaggccattcc
aagactttctcagagactctaatggaaggacaagggaacactactgctca
aagacagatgtggcaaggtccagtctggagttgtattttctccctagaag
agctgtggttatcagtcccaaggctgctgtgtgctcctttgtgaagtcct
caagacatcttggattttccttatgcaacattgcttaattagcttctggt
tgattttgtcccattctgtggtagctttctactgactctgtcccattttt
accttgcctgctgtataaaaaaatgctgtaattcctaataaacttattca
tcttgagtcatttgctaataaaaatctctccatctcacttcttgtcttct
atttttttttttcaatccctggtcatccccttaggaaatcatcactgaga
aggggctactggtccaggtcataaaggcagagtattttaacagatctggt
gaggactctttctttaggaagagtgtgccatgacgagagctttacacata
acaatcatctatagatgtgtatcactgtagtttcatattctgatgtatga
gatagagtagagagtgaaccgttgtgaggaattggattccatgatgttct
agctgca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_37534677_37535863
seq2: B6Ng01-144L10.g_68_1224 (reverse)

seq1  TGCAGCTAGGAACATACCATGGAAATCTAAAATTCCCTACACAACGATTC  50
      |||||||| ||||||  |||||||   |  ||||||   ||||||| |||
seq2  TGCAGCTA-GAACAT--CATGGAA---TCCAATTCC--TCACAACGGTTC  42

seq1  ACTCCTCATCT-TATCT-ATACATACAGAATATGAAACTACAGTGATAAC  98
      ||| |||  || ||||| |||||| |||||||||||||||||||||| ||
seq2  ACT-CTCTACTCTATCTCATACAT-CAGAATATGAAACTACAGTGAT-AC  89

seq1  ACATCTTATTTAGATTGATTTGTTATGGTTGTAAAAGCTTCTCTGTCATG  148
      |||||   | |||| ||| ||||||||  ||| ||||| |||| ||||| 
seq2  ACATC---TATAGA-TGA-TTGTTATG--TGT-AAAGC-TCTC-GTCAT-  128

seq1  GGCACACCTCTTCCTTAAAGAAAAGAGTCCTTCACAGATTCTGTTAAAAT  198
      |||||| ||||||| ||||| ||||||||||   |||| |||||||||| 
seq2  GGCACA-CTCTTCC-TAAAG-AAAGAGTCCTCACCAGA-TCTGTTAAAA-  173

seq1  TACTCTTGCCTTTTATGACCTGGACCAGTAGCCCCTTCTTCAGTGATGAT  248
      ||||| |||| ||||||||||||||||||||||||||| |||||||||||
seq2  TACTC-TGCC-TTTATGACCTGGACCAGTAGCCCCTTC-TCAGTGATGAT  220

seq1  TTCCTAAGGGGATGACCAGGGATTGAAAAAAAAAAATAGAAGACAAGAAG  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTAAGGGGATGACCAGGGATTGAAAAAAAAAAATAGAAGACAAGAAG  270

seq1  TTGAGATGGAGAGATTTTTTATTAGCAAATGACTCAAGATGAATAAGTTT  348
       ||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  -TGAGATGGAGAGA-TTTTTATTAGCAAATGACTCAAGATGAATAAGTTT  318

seq1  ATTAGGAATTACAGCATTTTTTTATACAGCAGGCAAGGTAAAAATGGGAC  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAGGAATTACAGCATTTTTTTATACAGCAGGCAAGGTAAAAATGGGAC  368

seq1  AGAGTCAGTAGAAAGCTACCACAGAATGGGACAAAATCAACCAGAAGCTA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTCAGTAGAAAGCTACCACAGAATGGGACAAAATCAACCAGAAGCTA  418

seq1  ATTAAGCAATGTTGCATAAGGAAAATCCAAGATGTCTTGAGGACTTCACA  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAGCAATGTTGCATAAGGAAAATCCAAGATGTCTTGAGGACTTCACA  468

seq1  AAGGAGCACACAGCAGCCTTGGGACTGATAACCACAGCTCTTCTAGGGAG  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAGCACACAGCAGCCTTGGGACTGATAACCACAGCTCTTCTAGGGAG  518

seq1  AAAATACAACTCCAGACTGGACCTTGCCACATCTGTCTTTGAGCAGTAGT  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATACAACTCCAGACTGGACCTTGCCACATCTGTCTTTGAGCAGTAGT  568

seq1  GTTCCCTTGTCCTTCCATTAGAGTCTCTGAGAAAGTCTTGGAATGGCCTG  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCCCTTGTCCTTCCATTAGAGTCTCTGAGAAAGTCTTGGAATGGCCTG  618

seq1  ACTTCCAATGTTTCAAACTCTATATAATTCAGTAGCTTATGCACAGCTCA  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCCAATGTTTCAAACTCTATATAATTCAGTAGCTTATGCACAGCTCA  668

seq1  GTCTACGCTGTCCCTGAAGCTAATATCTAATTCTCTAACTCACAGCTTTC  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTACGCTGTCCCTGAAGCTAATATCTAATTCTCTAACTCACAGCTTTC  718

seq1  ATGGATTATTGTTTCCCTAGGATGCCTCCTATGCCATACATTAGATAAAA  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGATTATTGTTTCCCTAGGATGCCTCCTATGCCATACATTAGATAAAA  768

seq1  TTTACACATTTTCTTCCTGTTAATATGATCAATTTGATTCTTAAACTCAG  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACACATTTTCTTCCTGTTAATATGATCAATTTGATTCTTAAACTCAG  818

seq1  TTATTATCCTAAAAGGACAGAAGAAATAGGATAATTACTGGAACCTCACA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTATCCTAAAAGGACAGAAGAAATAGGATAATTACTGGAACCTCACA  868

seq1  GTTCTAGCAGGTATCTGTATGTACCCAGAAGACACAAAAACTTTATTTTC  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTAGCAGGTATCTGTATGTACCCAGAAGACACAAAAACTTTATTTTC  918

seq1  TCATGATCTTGGGAGTGCACCAGATCTTCTCTATATTACCAACCTCTGGA  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGATCTTGGGAGTGCACCAGATCTTCTCTATATTACCAACCTCTGGA  968

seq1  CATCTTTATTCGAGAGAAAAATAAAATTTTAATAATTTCACATATTGTCT  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTTTATTCGAGAGAAAAATAAAATTTTAATAATTTCACATATTGTCT  1018

seq1  TGTGTTCCCAAATAGTTAGATATGATTCCAAGCTAACTTCAATGAACAGT  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTTCCCAAATAGTTAGATATGATTCCAAGCTAACTTCAATGAACAGT  1068

seq1  ATGCTGTAGTATTCATGAACTGTGGTATTGACTGACAAATTCATTAAAAA  1148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTGTAGTATTCATGAACTGTGGTATTGACTGACAAATTCATTAAAAA  1118

seq1  AATTAATAAGAAATAATTAGGAGAATGGAACAAGAATTC  1187
      |||||||||||||||||||||||||||||||||||||||
seq2  AATTAATAAGAAATAATTAGGAGAATGGAACAAGAATTC  1157