BAC Information

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BAC

Clone NameB6Ng01-144M12
Chromosome17 (Build37)
Map Location 82,475,635 - 82,676,316
singlet/doubletdoublet
Overlap geneLOC625467
Upstream geneLOC100043700, LOC100043704, Slc8a1, EG668832, LOC100043707
Downstream geneLOC668836, EG433141, EG625514, LOC100043711, LOC100043900, AW548124
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-144M12.bB6Ng01-144M12.g
ACCDH942365DH942366
length1,143189
definitionDH942365|Mus musculus domesticus DNA, BAC clone: B6Ng01-144M12, 5' end.DH942366|Mus musculus domesticus DNA, BAC clone: B6Ng01-144M12, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(82,475,635 - 82,476,803)(82,676,130 - 82,676,316)
sequence
gaattccaccatggactttacatttcaaaattacttaagtgaaaatgctg
aagtgatgcaatagtactactgtaaggaaatggattctacttgctgttac
aatgtgttattcccaatatcttccctaggcaactccaagaccatggactt
tcatgtccattgggatttgatttcacaactacttgtgtcctatatatgtg
tataagacagtcacctactcagccttgaagagaagcactgagcagtaccc
cattcatcctccatcggaaacatgttctctgactgcacaattgggtattc
ttaggttgtccagcaataaaatccatcttttcgtctccacattatggttt
tggagtattcactatatttgccaggtcttgctgagttgagaagacattct
gagtaacagtggaagcttttacgggagtagaatagggtccaagtattttt
aatgatatgcatgattatactttgaaatatgtatgcaatcctgaatccta
gtttgagtcacaaagtgtgctctgcgctaatatttgcttccttgtttgat
ggttgtacaacaatcaacacttacagtattgcctaagaatttgatgacaa
ttatatcagggaggatttatttttcttggaggctacagataatatttaat
ataataaattaggtattttctattctgctatttactatctcagctctaaa
tgactgtttcacattaattctagtgacattaatttagggacaacttgata
accagatcttgtaatagttaacttttgatctggacatgtctgaatccagg
aatatccagatatacaacaaagtattatgtattctcagtcatccattcct
tttaatgcttcaaaggaacaatgacaaatatgtgtaatttgtcattgggt
gaaatgatagaaattatccatgtatgtatggggtgtgtcttagaaggata
atacttgagttggtagatgaataggaaagatctgtcttagtggcgggtgg
gtactgcaggtagatccagatggagcaaagggacggatggatacccttat
cgctcttccaagtgaaacctcttgctttctgatcaggttcaattctccag
ctgtcgatttagaatgcttaagcatgttctaggctctgaggtg
tcgaagcactgagagtacacttactatgctccaagccttgggtggctgag
atcatgccatgaagtctgtaggcaacaaggtgacagacagtactgagtat
gttctctacaaaaggggtggtgctgttttgttctgttgcttctatagtgt
gtgtgtgtgtgtgagggtgtgtgtgtgtgtgtgtgtgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_82475635_82476803
seq2: B6Ng01-144M12.b_45_1187

seq1  GAATTCCACCATGGACTTTACATTTCAAAATTACTTAAGTGAAAATGCTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCACCATGGACTTTACATTTCAAAATTACTTAAGTGAAAATGCTG  50

seq1  AAGTGATGCAATAGTACTACTGTAAGGAAATGGATTCTACTTGCTGTTAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGATGCAATAGTACTACTGTAAGGAAATGGATTCTACTTGCTGTTAC  100

seq1  AATGTGTTATTCCCAATATCTTCCCTAGGCAACTCCAAGACCATGGACTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTGTTATTCCCAATATCTTCCCTAGGCAACTCCAAGACCATGGACTT  150

seq1  TCATGTCCATTGGGATTTGATTTCACAACTACTTGTGTCCTATATATGTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGTCCATTGGGATTTGATTTCACAACTACTTGTGTCCTATATATGTG  200

seq1  TATAAGACAGTCACCTACTCAGCCTTGAAGAGAAGCACTGAGCAGTACCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAGACAGTCACCTACTCAGCCTTGAAGAGAAGCACTGAGCAGTACCC  250

seq1  CATTCATCCTCCATCGGAAACATGTTCTCTGACTGCACAATTGGGTATTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCATCCTCCATCGGAAACATGTTCTCTGACTGCACAATTGGGTATTC  300

seq1  TTAGGTTGTCCAGCAATAAAATCCATCTTTTCGTCTCCACATTATGGTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGGTTGTCCAGCAATAAAATCCATCTTTTCGTCTCCACATTATGGTTT  350

seq1  TGGAGTATTCACTATATTTGCCAGGTCTTGCTGAGTTGAGAAGACATTCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGTATTCACTATATTTGCCAGGTCTTGCTGAGTTGAGAAGACATTCT  400

seq1  GAGTAACAGTGGAAGCTTTTACGGGAGTAGAATAGGGTCCAAGTATTTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTAACAGTGGAAGCTTTTACGGGAGTAGAATAGGGTCCAAGTATTTTT  450

seq1  AATGATATGCATGATTATACTTTGAAATATGTATGCAATCCTGAATCCTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGATATGCATGATTATACTTTGAAATATGTATGCAATCCTGAATCCTA  500

seq1  GTTTGAGTCACAAAGTGTGCTCTGCGCTAATATTTGCTTCCTTGTTTGAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGAGTCACAAAGTGTGCTCTGCGCTAATATTTGCTTCCTTGTTTGAT  550

seq1  GGTTGTACAACAATCAACACTTACAGTATTGCCTAAGAATTTGATGACAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTGTACAACAATCAACACTTACAGTATTGCCTAAGAATTTGATGACAA  600

seq1  TTATATCAGGGAGGATTTATTTTTCTTGGAGGCTACAGATAATATTTAAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATATCAGGGAGGATTTATTTTTCTTGGAGGCTACAGATAATATTTAAT  650

seq1  ATAATAAATTAGGTATTTTCTATTCTGCTATTTACTATCTCAGCTCTAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATAAATTAGGTATTTTCTATTCTGCTATTTACTATCTCAGCTCTAAA  700

seq1  TGACTGTTTCACATTAATTCTAGTGACATTAATTTAGGGACAACTTGATA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTGTTTCACATTAATTCTAGTGACATTAATTTAGGGACAACTTGATA  750

seq1  ACCAGATCTTGTAATAGTTAACTTTTGATCTGGACATGTCTGAATCCAGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGATCTTGTAATAGTTAACTTTTGATCTGGACATGTCTGAATCCAGG  800

seq1  AATATCCAGATATACAACAAAGTATTATGTATTCTCAGTCATCCATTCCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATCCAGATATACAACAAAGTATTATGTATTCTCAGTCATCCATTCCT  850

seq1  TTTAATGCTTCAAAGGAACAATGACAAATATGTGTAATTTGTCATTGGGT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAATGCTTCAAAGGAACAATGACAAATATGTGTAATTTGTCATTGGGT  900

seq1  GAAAATGATAGAAATTATCCATGTATGTATTGGGGTGTGTCTTAAGAAGA  950
      | ||||||||||||||||||||||||||| ||||||||||||| ||||| 
seq2  G-AAATGATAGAAATTATCCATGTATGTA-TGGGGTGTGTCTT-AGAAGG  947

seq1  ATAATACTTGAGTTGGTAAGATGAATAGGAAAGATCTGTCTTAGT-GCGG  999
      ||||||||||||||||| ||||||||||||||||||||||||||| ||||
seq2  ATAATACTTGAGTTGGT-AGATGAATAGGAAAGATCTGTCTTAGTGGCGG  996

seq1  GTGGGTACTGCCAGGTAGAACCCAGATGGAGCAAAAGGGGACAGAATGAA  1049
      |||||||||| ||||||| | ||||||||||||||  ||||| | ||| |
seq2  GTGGGTACTG-CAGGTAG-ATCCAGATGGAGCAAA--GGGAC-GGATGGA  1041

seq1  TACCCTTATCGCTTCTTCCAAAAGTTGAGACACTCTTGCTTTCCTTGGAA  1099
      |||||||||||| ||||||||    ||| || |||||||||||  ||   
seq2  TACCCTTATCGC-TCTTCCAA---GTGAAAC-CTCTTGCTTTC--TG---  1081

seq1  TTCAAGTTACAATTTCTCCAGCTGTCAGATTCTAAGATATGCTTAAGCCA  1149
       ||| ||| ||| ||||||||||||| |||  | ||| ||||||||| ||
seq2  ATCAGGTT-CAA-TTCTCCAGCTGTC-GAT--TTAGA-ATGCTTAAG-CA  1124

seq1  TGTTCATGGCTCTGAAGGTG  1169
      |||||  ||||||| |||||
seq2  TGTTCTAGGCTCTG-AGGTG  1143

seq1: chr17_82676130_82676316
seq2: B6Ng01-144M12.g_72_260 (reverse)

seq1  --CACACACACACACACACACACACACACACACACACACACACTATAGAA  48
        ||||||||||||||||||||| | ||||||||||||||||||||||||
seq2  CACACACACACACACACACACACCCTCACACACACACACACACTATAGAA  50

seq1  GCAACAGAACAAAACAGCACCACCCCTTTTGTAGAGAACATACTCAGTAC  98
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAACAGAACAAAACAGCACCACCCCTTTTGTAGAGAACATACTCAGTAC  100

seq1  TGTCTGTCACCTTGTTGCCTACAGACTTCATGGCATGATCTCAGCCACCC  148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTGTCACCTTGTTGCCTACAGACTTCATGGCATGATCTCAGCCACCC  150

seq1  AAGGCTTGGAGCATAGTAAGTGTACTCTCAGTGCTTCGA  187
      |||||||||||||||||||||||||||||||||||||||
seq2  AAGGCTTGGAGCATAGTAAGTGTACTCTCAGTGCTTCGA  189