BAC Information

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BAC

Clone NameB6Ng01-148E14
Chromosome17 (Build37)
Map Location 77,079,313 - 77,242,819
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC100043885, LOC100043886
Downstream geneEG624348, LOC545234, LOC100043887
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-148E14.bB6Ng01-148E14.g
ACCDH944941DH944942
length1,222598
definitionDH944941|Mus musculus domesticus DNA, BAC clone: B6Ng01-148E14, 5' end.DH944942|Mus musculus domesticus DNA, BAC clone: B6Ng01-148E14, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(77,241,583 - 77,242,819)(77,079,313 - 77,079,910)
sequence
gaattctttaagttaacatgttgagatgtttaaataagcagatacatgaa
tgcctaggtgaaaaaaaatagtattttacaaggcaataaacaataaagaa
tcagtatcataatttatagtctcctaattattactaaaatataatggact
gattataatatatgttgtgtctatatggcattccatattagagataaatt
ctccttttcatggtaactaaccagacttacttctgtttaatgaatatgtc
ataggaatgctatttcagaagactactatttgaggagtgatattctggct
tctatcttataaaaccataatgtaggcaatgtagtctttaactgctatgt
aggagatttctctattcaaaaaccattgagaaggatatttatttatttta
cttcatgtctctgagtattttgccttcatatattgattggctcttggaac
tctccttgtcccatgatacttctatgtattcaccctatagtcatagtttt
actaagcctgacactcaggtaattcaatattgaattatttcaatatagac
ataaaaactggaaaactaaaaacttgttccaataaatagaaaaaaattac
ttgataaacaaaaatattattttccctaaatttctatactttaataagtc
attaaatttctataaaaaattgttgtcagaagaaataaaaaagaaattaa
aaagttctatttttttaatatttttattaggtatttttctcatttacatt
tccaatgctatcccaaaagtcccccataccctccaccccactctcctacc
catccactcccactttttggccctggtgttcccctgtactggggcatata
aagtttacatgtccaatgggcctctctttccagtgatgggctgactaggc
ccatcttttgaaagttctattttttaagaaaatctacaatgctttaagtc
tcataaaatattttgatatattgtttatattattgatatcatatcagttt
aactattagtcctgagagtatatcatatattgaaaacggagttgtttctg
tgtctccagcatatagtcaatactctataattttctttaaatatattttc
tggatgaatccattatacagccgacaatattcatcttcaatgcctatttc
caaagaaaatcttcccgaccttgtcctagaataggaacacatttagctaa
agtgaattttgttccttctgct
gaattcttggacaggctctagtggctcacgttcagcacacttcattccct
ctgccacatccacttcttttctttgtgtcctttctcaaccttgcacattc
ctttgtagcagtgaatacttccttactacctgtgcatacggattacttca
tttacctactaatgctcatggtcttggtttatttgaactcctataacaaa
atatgatatcatgaattatgtatgccatgcttttggagaataagtacaac
atcaaattattgaccaattcagtgtctggtgatggcaagtttcccattat
gaaaatgaaattattttctttttcttttcaaggataataataaaatcaat
aagatgaaatataacaagaaaaaaatgaacacatcatgttggacaaagaa
aacatatagaaaagaggtgcacagagggcaaaagaaaaggaaaaaagaga
aacagagaaacaagaaacatctcattcacattcttaggaatctcataaga
ccactgaactgaagatatgtataaccagtatgacggtagtaggtaatata
ttcttccctccatctcttctcttctcttctcttctcttctcttatctt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_77241583_77242819
seq2: B6Ng01-148E14.b_45_1266 (reverse)

seq1  AGCAGATG--ACAAAATTCA-TTTGACTAAATTTGTTTCCTATTCTTAGA  47
      |||||| |  |||||||||| |||  |||||| || ||||||||||  ||
seq2  AGCAGAAGGAACAAAATTCACTTTAGCTAAATGTG-TTCCTATTCTAGGA  49

seq1  CACAGGTCTGGAAAGATTTTCTTTTGAAATATGCATTTGAAAGATGAATT  97
      || ||||| || |||||||||||| |||||| |||||   |||||||| |
seq2  CA-AGGTC-GGGAAGATTTTCTTTGGAAATAGGCATT--GAAGATGAA-T  94

seq1  ATTGT-GGCTGTATAATGTGAATTCAT-CAGAAAATATATTTTTAAATGA  145
      ||||| ||||||||||  || |||||| ||||||||||||||   || ||
seq2  ATTGTCGGCTGTATAA--TGGATTCATCCAGAAAATATATTT---AAAGA  139

seq1  AAAATATATGATATTGACTTATATGCTGAGAACACAGAAACAACTCCGTT  195
      ||| ||||   ||||||| |||||||||   |||||||||||||||||||
seq2  AAATTATAGAGTATTGAC-TATATGCTGGAGACACAGAAACAACTCCGTT  188

seq1  TTCAATTAATATTGATATACTCTCAGAACTAATTAGTTAAAACTGATTAT  245
      ||||||  ||| |||||||||||||| ||||| ||||| ||||||| |||
seq2  TTCAAT--ATA-TGATATACTCTCAGGACTAA-TAGTT-AAACTGA-TAT  232

seq1  GATATCAATAATATAAACAATTATATTCAAAATATTTTATGAGACTTAAA  295
      |||||||||||||||||||| |||| ||||||||||||||||||||||||
seq2  GATATCAATAATATAAACAA-TATA-TCAAAATATTTTATGAGACTTAAA  280

seq1  GCATTTGTAGATTTTCTTAAAAAATAGAACTTTTCAAAAGAT-GGCCTAG  344
      ||| |||||||||||||||||||||||||| ||||||||||| |||||||
seq2  GCA-TTGTAGATTTTCTTAAAAAATAGAAC-TTTCAAAAGATGGGCCTAG  328

seq1  TCAG-CCATCACTGGAAAGAGAGGCCCATTGGACATGTAAACTTTATATG  393
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGCCCATCACTGGAAAGAGAGGCCCATTGGACATGTAAACTTTATATG  378

seq1  CCCCAGTACAGGGGAACACCAGGGCCAAAAAGTGGGAGTGGATGGGTAGG  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCAGTACAGGGGAACACCAGGGCCAAAAAGTGGGAGTGGATGGGTAGG  428

seq1  AGAGTGGGGTGGAGGGTATGGGGGACTTTTGGGATAGCATTGGAAATGTA  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTGGGGTGGAGGGTATGGGGGACTTTTGGGATAGCATTGGAAATGTA  478

seq1  AATGAGAAAAATACCTAATAAAAATATTAAAAAAATAGAACTTTTTAATT  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAGAAAAATACCTAATAAAAATATTAAAAAAATAGAACTTTTTAATT  528

seq1  TCTTTTTTATTTCTTCTGACAACAATTTTTTATAGAAATTTAATGACTTA  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTTTTATTTCTTCTGACAACAATTTTTTATAGAAATTTAATGACTTA  578

seq1  TTAAAGTATAGAAATTTAGGGAAAATAATATTTTTGTTTATCAAGTAATT  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAGTATAGAAATTTAGGGAAAATAATATTTTTGTTTATCAAGTAATT  628

seq1  TTTTTCTATTTATTGGAACAAGTTTTTAGTTTTCCAGTTTTTATGTCTAT  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTCTATTTATTGGAACAAGTTTTTAGTTTTCCAGTTTTTATGTCTAT  678

seq1  ATTGAAATAATTCAATATTGAATTACCTGAGTGTCAGGCTTAGTAAAACT  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGAAATAATTCAATATTGAATTACCTGAGTGTCAGGCTTAGTAAAACT  728

seq1  ATGACTATAGGGTGAATACATAGAAGTATCATGGGACAAGGAGAGTTCCA  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGACTATAGGGTGAATACATAGAAGTATCATGGGACAAGGAGAGTTCCA  778

seq1  AGAGCCAATCAATATATGAAGGCAAAATACTCAGAGACATGAAGTAAAAT  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCCAATCAATATATGAAGGCAAAATACTCAGAGACATGAAGTAAAAT  828

seq1  AAATAAATATCCTTCTCAATGGTTTTTGAATAGAGAAATCTCCTACATAG  893
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAAATATCCTTCTCAATGGTTTTTGAATAGAGAAATCTCCTACATAG  878

seq1  CAGTTAAAGACTACATTGCCTACATTATGGTTTTATAAGATAGAAGCCAG  943
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTAAAGACTACATTGCCTACATTATGGTTTTATAAGATAGAAGCCAG  928

seq1  AATATCACTCCTCAAATAGTAGTCTTCTGAAATAGCATTCCTATGACATA  993
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATCACTCCTCAAATAGTAGTCTTCTGAAATAGCATTCCTATGACATA  978

seq1  TTCATTAAACAGAAGTAAGTCTGGTTAGTTACCATGAAAAGGAGAATTTA  1043
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATTAAACAGAAGTAAGTCTGGTTAGTTACCATGAAAAGGAGAATTTA  1028

seq1  TCTCTAATATGGAATGCCATATAGACACAACATATATTATAATCAGTCCA  1093
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTAATATGGAATGCCATATAGACACAACATATATTATAATCAGTCCA  1078

seq1  TTATATTTTAGTAATAATTAGGAGACTATAAATTATGATACTGATTCTTT  1143
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATATTTTAGTAATAATTAGGAGACTATAAATTATGATACTGATTCTTT  1128

seq1  ATTGTTTATTGCCTTGTAAAATACTATTTTTTTTCACCTAGGCATTCATG  1193
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTTTATTGCCTTGTAAAATACTATTTTTTTTCACCTAGGCATTCATG  1178

seq1  TATCTGCTTATTTAAACATCTCAACATGTTAACTTAAAGAATTC  1237
      ||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTGCTTATTTAAACATCTCAACATGTTAACTTAAAGAATTC  1222

seq1: chr17_77079313_77079910
seq2: B6Ng01-148E14.g_70_667

seq1  GAATTCTTGGACAGGCTCTAGTGGCTCACGTTCAGCACACTTCATTCCCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTGGACAGGCTCTAGTGGCTCACGTTCAGCACACTTCATTCCCT  50

seq1  CTGCCACATCCACTTCTTTTCTTTGTGTCCTTTCTCAACCTTGCACATTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCACATCCACTTCTTTTCTTTGTGTCCTTTCTCAACCTTGCACATTC  100

seq1  CTTTGTAGCAGTGAATACTTCCTTACTACCTGTGCATACGGATTACTTCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGTAGCAGTGAATACTTCCTTACTACCTGTGCATACGGATTACTTCA  150

seq1  TTTACCTACTAATGCTCATGGTCTTGGTTTATTTGAACTCCTATAACAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACCTACTAATGCTCATGGTCTTGGTTTATTTGAACTCCTATAACAAA  200

seq1  ATATGATATCATGAATTATGTATGCCATGCTTTTGGAGAATAAGTACAAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGATATCATGAATTATGTATGCCATGCTTTTGGAGAATAAGTACAAC  250

seq1  ATCAAATTATTGACCAATTCAGTGTCTGGTGATGGCAAGTTTCCCATTAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAAATTATTGACCAATTCAGTGTCTGGTGATGGCAAGTTTCCCATTAT  300

seq1  GAAAATGAAATTATTTTCTTTTTCTTTTCAAGGATAATAATAAAATCAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAATGAAATTATTTTCTTTTTCTTTTCAAGGATAATAATAAAATCAAT  350

seq1  AAGATGAAATATAACAAGAAAAAAATGAACACATCATGTTGGACAAAGAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATGAAATATAACAAGAAAAAAATGAACACATCATGTTGGACAAAGAA  400

seq1  AACATATAGAAAAGAGGTGCACAGAGGGCAAAAGAAAAGGAAAAAAGAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATATAGAAAAGAGGTGCACAGAGGGCAAAAGAAAAGGAAAAAAGAGA  450

seq1  AACAGAGAAACAAGAAACATCTCATTCACATTCTTAGGAATCTCATAAGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGAGAAACAAGAAACATCTCATTCACATTCTTAGGAATCTCATAAGA  500

seq1  CCACTGAACTGAAGATATGTATAACCAGTATGACGGTAGTAGGTAATATA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTGAACTGAAGATATGTATAACCAGTATGACGGTAGTAGGTAATATA  550

seq1  TTCTTCCCTCCATCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTT  598
      ||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  TTCTTCCCTCCATCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTATCTT  598