BAC Information

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BAC

Clone NameB6Ng01-148K21
Chromosome17 (Build37)
Map Location 18,584,421 - 18,584,910
singlet/doubletsinglet
Overlap geneVmn2r95
Upstream geneLix1, LOC383297, Lnpep, EG665140, LOC100041519, EG626942, 4930546H06Rik, Has1, Fpr1, Fpr-rs2, LOC665183, LOC670250, EG665187, LOC546683, Fprl1, LOC627060, Fpr-rs4, EG637021, EG665210, Vmn2r92, EG665227, EG627132, LOC100041612
Downstream geneVmn2r-ps114, EG433070, Vmn2r-ps115, Vmn2r-ps117, LOC100042183, EG627367, EG224552, LOC665344, LOC627466, LOC627476, EG665371, EG665376
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-148K21.bB6Ng01-148K21.g
ACCDH945219DH945220
length872484
definitionDH945219|Mus musculus domesticus DNA, BAC clone: B6Ng01-148K21, 5' end.DH945220|Mus musculus domesticus DNA, BAC clone: B6Ng01-148K21, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgggggacttttgggagtcacttatgcatagaatcatatcat
cttcaaatactgacattttgacttcttcctttccaatttgtatccctctg
actttttcttctttaattactcttgctaggactttgagtagtacattgaa
caggtttggagagagtgggcatcttgtctagttcctgattatagtgggat
tgcttcaattttttttacatttactttgatgttggctattgctttactgt
atattgcttttattatgtttaggtatgcgccttgaattcctcatctttca
aagccttttatcatgaaggggtgttggattttgtcaaatgctttttcagc
atataatgagatgatcatgagttgttttttttgttgagattgtttacata
gtggattttgttatggattactctatattgaactatccctgcactcctag
gatgaagcctacttgatcatgatgtatgatccttctaatgtgttattgga
tttgatttgggagaattttattgagtatttttgcatcaatattcataaag
gaaattggtctgaagttctcctttgttgggtcttcctgtggtttaggtat
gagagtaattgtggcttcatagaatgaactgggtagggtacctaaagttt
tttgtttgtttctttgtttgtttgtttatcttttcgaaaaaaatttgagg
agtattggaattattagttcttctttgaaggtctgatgtaactctacaat
aaatctacctggtcctgggcttttttatgttttggagaatattaattaaa
ggttctatttctttagggatatgggaattgcagattgtaatctgttctga
tttaagtttagtacctggtact
tcagcctctctgcattatgcctgattggatgaagccatgctcctaccttg
atgataattgacaggacttttgaacttctaagccagcacaaattaaatgt
tatgcttttatgcgttgcctttttcatggtatttgttcacagcattaaaa
acctacgacagtgtattacacaatatttctatatttctaaaaatataatt
tataatcagagtatctattttatttcattaataacattgaattgatattt
taaaatataaaaatagtattatcttattgttcaaatttctattaactatg
atttcaaacttacagtgtttagcatttctttgacctgcatatggttgaac
aatacaattaattaacagacactggcctgatttgttcttagtgtatgaat
ggctctttttaggcatacacaggatacattcaaaaattcatttatatatt
aatgtgtgtgtgtgtttgtgtttgtgtgtgtgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_18584421_18584910
seq2: B6Ng01-148K21.g_67_556 (reverse)

seq1  CACACACACACAAACACAAACACACACACACATTAATATATAAATGAATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACACAAACACAAACACACACACACATTAATATATAAATGAATT  50

seq1  TTTGAATGTATCCTGTGTATGCCTAAAAAGAGCCATTCATACACTAAGAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAATGTATCCTGTGTATGCCTAAAAAGAGCCATTCATACACTAAGAA  100

seq1  CAAATCAGGCCAGTGTCTGTTAATTAATTGTATTGTTCAACCATATGCAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATCAGGCCAGTGTCTGTTAATTAATTGTATTGTTCAACCATATGCAG  150

seq1  GTCAAAGAAATGCTAAACACTGTAAGTTTGAAATCATAGTTAATAGAAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAAAGAAATGCTAAACACTGTAAGTTTGAAATCATAGTTAATAGAAAT  200

seq1  TTGAACAATAAGATAATACTATTTTTATATTTTAAAATATCAATTCAATG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAACAATAAGATAATACTATTTTTATATTTTAAAATATCAATTCAATG  250

seq1  TTATTAATGAAATAAAATAGATACTCTGATTATAAATTATATTTTTAGAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTAATGAAATAAAATAGATACTCTGATTATAAATTATATTTTTAGAA  300

seq1  ATATAGAAATATTGTGTAATACACTGTCGTAGGTTTTTAATGCTGTGAAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAGAAATATTGTGTAATACACTGTCGTAGGTTTTTAATGCTGTGAAC  350

seq1  AAATACCATGAAAAAGGCAACGCATAAAAGCATAACATTTAATTTGTGCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATACCATGAAAAAGGCAACGCATAAAAGCATAACATTTAATTTGTGCT  400

seq1  GGCTTAGAAGTTCAAAAGTCCTGTCAATTATCATCAAGGTAGGAGCATGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTTAGAAGTTCAAAAGTCCTGTCAATTATCATCAAGGTAGGAGCATGG  450

seq1  CTTCATCCAATCAGGCATAATGCAGAGAGGCTGAGAATTC  490
      ||||||||||||||||||||||||||||||||||||||||
seq2  CTTCATCCAATCAGGCATAATGCAGAGAGGCTGAGAATTC  490