BAC Information

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BAC

Clone NameB6Ng01-148K22
Chromosome17 (Build37)
Map Location 77,238,338 - 77,418,038
singlet/doubletdoublet
Overlap geneEG624348
Upstream geneLOC100043885, LOC100043886
Downstream geneLOC545234, LOC100043887
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-148K22.bB6Ng01-148K22.g
ACCDH945221DH945222
length1,1281,111
definitionDH945221|Mus musculus domesticus DNA, BAC clone: B6Ng01-148K22, 5' end.DH945222|Mus musculus domesticus DNA, BAC clone: B6Ng01-148K22, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(77,416,902 - 77,418,038)(77,238,338 - 77,239,456)
sequence
gaattcagtcttgttttgatcttaccactttccacattaaataaattaat
tattccctatcttatgctatattttgtaagtacgttttactatctttttc
agataattaaaaaaaatatcttaaatttaatctttacttgtttgttatat
gaaaatttatcatatcaacttgtagacatattaggtggattgaaccagtc
tttgattttcaaagcaatttattaataatttaatttctgaaatgcatggg
cacttttcattacactaacagtcatttctattggaaatatgtaaatttta
aggatttcaggttcacttgagaaattgaaaatagctggaattaatacagg
atttagaactttctggtttcattgttgaatacttgtaagttttgcttaca
atatttgcttatctctaatatttcttgtattatgacccactcagaaaatc
atccaaagccattttgaaaacgttctaacaaaaagataaccacttagttt
agaaacctttaaggtaatgcattttttttatactaggatggaattcctca
agtaaatttcagcctttttgaaaataatgtctggaagtgatattcaaaaa
ttgatactcatcccagactgaagagaaagctaatatgagctctgagaagt
aaacgttaggacatggagcatcctgacattgcagaagcactctcagaatg
ggaacaccttctactattttattatctagatcatttattttcataatggt
agaaccagtaaaactattttgttacacaaagtcctgaaggatgtccttat
gcagaattgagacaaatgatgacactctgtaaataccattatttaacaaa
aattgttccagaaattttctatgggtgagaaatattcacattttatatat
atatatcatgtacatttatattgtcagttttgtattctgtgtatactttc
ttttctttctcatttttttaaaatttcccatcctgtttattgactctcta
ttaactccaaggcatggggaaatgattactaggaaagcatgaaaatatga
atgacttaaacagtctagttttttatatttataatctggactcatgaact
taatacacaatagctcacgcatttgaca
gaattcagtaaagtgagaaaaaagactggttctgaattaaaatagaattg
tagcattttgtattgtaaaatagttctcttctacaaatgcatttttacaa
gtgataagtccttttttaaaattgaaaaaagatattttaacagaatatat
tttgattatggttgttccttcccaaagtcttctcagagcataatattaat
attaatattaataattaataatggaatagtgaacagtaactagaatagga
caaaacgatcatacagaaaaaaaatagaaaatagccaaaaaatgtcacaa
gaaacacatagacacagagacacaaacattgacatacacagaaattcctt
aaaagcacaaaattggaaaacctaatataaaaacaaaataaacaataaga
tgaaagatgaaaatctctaagaataccactaattttattttgcattgtct
atctattattgggcatgaaaatgggcatacaaatatctacactcagggag
actaaacttacatactttaaagttgttgaactgttttcataaggattata
tgatttttttaccatttaatctttaaaagtaatgcctttgacctatttgt
ttacaaaatatttttcctgaaaaactggtgtagctttttaacttaatttc
catgttaaccaaaccaagtataaattaagaccttaaggagttagtcaaat
actgcaaaatgcaaatattcccattgtaattatttttttttaatatggta
tttttcatttgcactactctagagtgtttttcatttttttctaataaacc
attgaccaaaagtcagtgggaaagcaagagtttattctcttactggttac
actccatattcaaggggagtcagtacaggagatcaaggcaggagcctgga
tttgcaaactgaaagaatcctcttgaaggaatgtgctggattgcttgttt
cctgacttgttctactacattttctaaaagcccagactaccttgccagcg
atgcatgctcataaggactggtttcatcccacatcagtcatggagctttt
ggtgtaaagcttcaggtctagtgtgagtggaggggtgattctgatcttca
ctactctacaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_77416902_77418038
seq2: B6Ng01-148K22.b_48_1175 (reverse)

seq1  TGTCAAATGC-TGAGCCTATTGTGTAAATTAGTTCATGAGT-CAGATTAT  48
      |||||||||| |||| ||||||||| | | ||||||||||| ||||||||
seq2  TGTCAAATGCGTGAG-CTATTGTGT-ATTAAGTTCATGAGTCCAGATTAT  48

seq1  -AATATAATAAACTAGAACTGTTTTAAAGTCA-TCATATTTTTCATGCTT  96
       ||||||| ||||||| |||||||  |||||| ||||| |||||||||||
seq2  AAATATAAAAAACTAG-ACTGTTT--AAGTCATTCATA-TTTTCATGCTT  94

seq1  TTCCCTAGTTAATCATTTCCCCATGCCTTGGAGTTAATAGAGAGTCAATA  146
      |  ||||| |||||||||||||||||||||||||||||||||||||||||
seq2  T--CCTAG-TAATCATTTCCCCATGCCTTGGAGTTAATAGAGAGTCAATA  141

seq1  AACCAAGGATGGGAAATTTTTAAAAAAATGAGAAAGAAAAGAAAGTATAC  196
      |||  ||||||||||| |||||||||||||||||||||||||||||||||
seq2  AAC--AGGATGGGAAA-TTTTAAAAAAATGAGAAAGAAAAGAAAGTATAC  188

seq1  ACAGAATACAAAAACTGACAATATAAATGTACATGATATATATATATAAA  246
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAATAC-AAAACTGACAATATAAATGTACATGATATATATATATAAA  237

seq1  ATGTGAATATTTCTCACCCATAGAAAATTTCTGGAACAATTTTTGTTAAA  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGAATATTTCTCACCCATAGAAAATTTCTGGAACAATTTTTGTTAAA  287

seq1  TAATGGTATTTACAGAGTGTCATCATTTGTCTCAATTCTGCATAAGGACA  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGGTATTTACAGAGTGTCATCATTTGTCTCAATTCTGCATAAGGACA  337

seq1  TCCTTCAGGACTTTGTGTAACAAAATAGTTTTACTGGTTCTACCATTATG  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTCAGGACTTTGTGTAACAAAATAGTTTTACTGGTTCTACCATTATG  387

seq1  AAAATAAATGATCTAGATAATAAAATAGTAGAAGGTGTTCCCATTCTGAG  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATAAATGATCTAGATAATAAAATAGTAGAAGGTGTTCCCATTCTGAG  437

seq1  AGTGCTTCTGCAATGTCAGGATGCTCCATGTCCTAACGTTTACTTCTCAG  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGCTTCTGCAATGTCAGGATGCTCCATGTCCTAACGTTTACTTCTCAG  487

seq1  AGCTCATATTAGCTTTCTCTTCAGTCTGGGATGAGTATCAATTTTTGAAT  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCATATTAGCTTTCTCTTCAGTCTGGGATGAGTATCAATTTTTGAAT  537

seq1  ATCACTTCCAGACATTATTTTCAAAAAGGCTGAAATTTACTTGAGGAATT  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCACTTCCAGACATTATTTTCAAAAAGGCTGAAATTTACTTGAGGAATT  587

seq1  CCATCCTAGTATAAAAAAAATGCATTACCTTAAAGGTTTCTAAACTAAGT  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCCTAGTATAAAAAAAATGCATTACCTTAAAGGTTTCTAAACTAAGT  637

seq1  GGTTATCTTTTTGTTAGAACGTTTTCAAAATGGCTTTGGATGATTTTCTG  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTATCTTTTTGTTAGAACGTTTTCAAAATGGCTTTGGATGATTTTCTG  687

seq1  AGTGGGTCATAATACAAGAAATATTAGAGATAAGCAAATATTGTAAGCAA  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGGTCATAATACAAGAAATATTAGAGATAAGCAAATATTGTAAGCAA  737

seq1  AACTTACAAGTATTCAACAATGAAACCAGAAAGTTCTAAATCCTGTATTA  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTACAAGTATTCAACAATGAAACCAGAAAGTTCTAAATCCTGTATTA  787

seq1  ATTCCAGCTATTTTCAATTTCTCAAGTGAACCTGAAATCCTTAAAATTTA  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCAGCTATTTTCAATTTCTCAAGTGAACCTGAAATCCTTAAAATTTA  837

seq1  CATATTTCCAATAGAAATGACTGTTAGTGTAATGAAAAGTGCCCATGCAT  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATTTCCAATAGAAATGACTGTTAGTGTAATGAAAAGTGCCCATGCAT  887

seq1  TTCAGAAATTAAATTATTAATAAATTGCTTTGAAAATCAAAGACTGGTTC  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGAAATTAAATTATTAATAAATTGCTTTGAAAATCAAAGACTGGTTC  937

seq1  AATCCACCTAATATGTCTACAAGTTGATATGATAAATTTTCATATAACAA  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCCACCTAATATGTCTACAAGTTGATATGATAAATTTTCATATAACAA  987

seq1  ACAAGTAAAGATTAAATTTAAGATATTTTTTTTAATTATCTGAAAAAGAT  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGTAAAGATTAAATTTAAGATATTTTTTTTAATTATCTGAAAAAGAT  1037

seq1  AGTAAAACGTACTTACAAAATATAGCATAAGATAGGGAATAATTAATTTA  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAAAACGTACTTACAAAATATAGCATAAGATAGGGAATAATTAATTTA  1087

seq1  TTTAATGTGGAAAGTGGTAAGATCAAAACAAGACTGAATTC  1137
      |||||||||||||||||||||||||||||||||||||||||
seq2  TTTAATGTGGAAAGTGGTAAGATCAAAACAAGACTGAATTC  1128

seq1: chr17_77238338_77239456
seq2: B6Ng01-148K22.g_70_1180

seq1  GAATTCAGTAAAGTGAGAAAAAAGACTGGTTCTGAATTAAAATAGAATTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTAAAGTGAGAAAAAAGACTGGTTCTGAATTAAAATAGAATTG  50

seq1  TAGCATTTTGTATTGTAAAATAGTTCTCTTCTACAAATGCATTTTTACAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCATTTTGTATTGTAAAATAGTTCTCTTCTACAAATGCATTTTTACAA  100

seq1  GTGATAAGTCCTTTTTTAAAATTGAAAAAAGATATTTTAACAGAATATAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGATAAGTCCTTTTTTAAAATTGAAAAAAGATATTTTAACAGAATATAT  150

seq1  TTTGATTATGGTTGTTCCTTCCCAAAGTCTTCTCAGAGCATAATATTAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGATTATGGTTGTTCCTTCCCAAAGTCTTCTCAGAGCATAATATTAAT  200

seq1  ATTAATATTAATAATTAATAATGGAATAGTGAACAGTAACTAGAATAGGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAATATTAATAATTAATAATGGAATAGTGAACAGTAACTAGAATAGGA  250

seq1  CAAAACGATCATACAGAAAAAAAATAGAAAATAGCCAAAAAATGTCACAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAACGATCATACAGAAAAAAAATAGAAAATAGCCAAAAAATGTCACAA  300

seq1  GAAACACATAGACACAGAGACACAAACATTGACATACACAGAAATTCCTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACACATAGACACAGAGACACAAACATTGACATACACAGAAATTCCTT  350

seq1  AAAAGCACAAAATTGGAAAACCTAATATAAAAACAAAATAAACAATAAGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGCACAAAATTGGAAAACCTAATATAAAAACAAAATAAACAATAAGA  400

seq1  TGAAAGATGAAAATCTCTAAGAATACCACTAATTTTATTTTGCATTGTCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAGATGAAAATCTCTAAGAATACCACTAATTTTATTTTGCATTGTCT  450

seq1  ATCTATTATTGGGCATGAAAATGGGCATACAAATATCTACACTCAGGGAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTATTATTGGGCATGAAAATGGGCATACAAATATCTACACTCAGGGAG  500

seq1  ACTAAACTTACATACTTTAAAGTTGTTGAACTGTTTTCATAAGGATTATA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAAACTTACATACTTTAAAGTTGTTGAACTGTTTTCATAAGGATTATA  550

seq1  TGATTTTTTTACCATTTAATCTTTAAAAGTAATGCCTTTGACCTATTTGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTTTTTTACCATTTAATCTTTAAAAGTAATGCCTTTGACCTATTTGT  600

seq1  TTACAAAATATTTTTCCTGAAAAACTGGTGTAGCTTTTTAACTTAATTTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACAAAATATTTTTCCTGAAAAACTGGTGTAGCTTTTTAACTTAATTTC  650

seq1  CATGTTAACCAAACCAAGTATAAATTAAGACCTTAAGGAGTTAGTCAAAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTTAACCAAACCAAGTATAAATTAAGACCTTAAGGAGTTAGTCAAAT  700

seq1  ACTGCAAAATGCAAATATTCCCATTGTAATTA-TTTTTTTTAATATGGTA  749
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  ACTGCAAAATGCAAATATTCCCATTGTAATTATTTTTTTTTAATATGGTA  750

seq1  TTTTTCATTTGCACTACTCTAGAGTGTTTTTCA-TTTTTTCTAATAAACC  798
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  TTTTTCATTTGCACTACTCTAGAGTGTTTTTCATTTTTTTCTAATAAACC  800

seq1  ATTGACCAAAAGTCAGTGGGAAAGCAAGAGTTTATTCTCTTACTGGTTAC  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGACCAAAAGTCAGTGGGAAAGCAAGAGTTTATTCTCTTACTGGTTAC  850

seq1  ACTCCATATTCAAGGGGAGTCAGTACAGGAGATCAAGGCAGGAGCCTGGA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCCATATTCAAGGGGAGTCAGTACAGGAGATCAAGGCAGGAGCCTGGA  900

seq1  TTTGCAAACTGAAAGAATCCTCTTGAAGGAATGTTGCTGGATTGCTTGGT  948
      ||||||||||||||||||||||||||||||||| ||||||||||||| ||
seq2  TTTGCAAACTGAAAGAATCCTCTTGAAGGAATG-TGCTGGATTGCTT-GT  948

seq1  TTCCTGACTTGTTCTACTACATTTCTTAAAAAGCCCAGACTAACCTTGCC  998
      |||||||||||||||||||||||| |  ||||||||||||| ||||||||
seq2  TTCCTGACTTGTTCTACTACATTT-TCTAAAAGCCCAGACT-ACCTTGCC  996

seq1  AGCGATGGCATGCTCATAAAGGACTGG-TTCATCCCACATCAGTCATGGA  1047
      |||||| |||||||||| ||||||||| ||||||||||||||||||||||
seq2  AGCGAT-GCATGCTCAT-AAGGACTGGTTTCATCCCACATCAGTCATGGA  1044

seq1  GGCCTTTGTGTAAAGCCTTTCAAGGGCTAGTGGAAGTG--AGGGTGATTC  1095
      |   || |||||||||  ||| ||| ||||||  ||||   |||||||||
seq2  GCTTTTGGTGTAAAGC--TTC-AGGTCTAGTGTGAGTGGAGGGGTGATTC  1091

seq1  TGAATCTTCTATCTACTCTTACAA  1119
      || ||||||   |||||| |||||
seq2  TG-ATCTTC--ACTACTC-TACAA  1111