BAC Information

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BAC

Clone NameB6Ng01-149A18
Chromosome17 (Build37)
Map Location 38,639,605 - 38,640,738
singlet/doubletsinglet
Overlap genenone
Upstream geneOlfr111, Olfr112, Olfr113, Olfr114, Olfr115, Olfr116, Olfr117, Olfr118, Olfr119, Scocp, Olfr120, Olfr1558-ps1, Olfr121, Olfr122, Olfr123, Olfr124, Olfr125, LOC672822, Olfr126, Olfr127, Olfr128, Ppia-ps17_697.1, Olfr761, Olfr1552-ps1, LOC100043265, Olfr129, Olfr130, Olfr131, Olfr132, Olfr133, Olfr134, Olfr135, Olfr138, Olfr137, Olfr762-ps1, Olfr136, LOC626985
Downstream geneLOC100043297
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-149A18.bB6Ng01-149A18.g
ACCDH945491DH945492
length1,2171,128
definitionDH945491|Mus musculus domesticus DNA, BAC clone: B6Ng01-149A18, 5' end.DH945492|Mus musculus domesticus DNA, BAC clone: B6Ng01-149A18, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccataaatttcagggacaaaacatagctgtccactctcttactac
ctcttcaatgtagtccttgaagttctacacagagcaataaggaactaaag
gagatcaaaggaatacaaacctgaaagtaataaaagtatcatagttagat
aatatgatactatgtacattagagcctactcattttctactagagaatac
ctatagcagataaacaccttcagcaaagaggttagcttcaaagaaaactc
aataaagttaagttagacttcattatacaaatggtaaaatggatgagaaa
gattttggagactcaatacttttcctagtagctacatattatatatatat
atatatattcttactgtgactctaaaaaagaagagaaaaaccagtatgac
aaggacttcaagactctgaggaaagaaattgagtaatatatcagaaaata
gaaaaaaatttccatgctcatgggtagtgaggattaatatagtgaaaatg
accatcttacctatagcaatacacagagtcaatggaatccccatcaaaac
tccaacacaattctttacagaccttgtaattatatttcttaacaatgtgg
aagtccaaaaaaatgcagaatagctaaaaaaaaaaaaaaaaaaaaaaaaa
ctaaaacagtagagaaattctggaagagtcaccatccctgacctcaaaaa
caagtactctttcaacaatttattcaagtttagagaattcaagtgactta
aatgaatatgaatatacatctgttacttgttatacttttccacatggaaa
aatggatctgtttgccattatattgactttttaagactagaattgtaaac
attcagttttatatgggaatggttctcatagatattgcttgtcctctatg
aagacattggtagtgagagcttctgaagcagtgggattaattatctcagt
ggcttagtcactggtggagttggcttgtctgggatcacttcacacaaatg
acatgtggtgtagccctggtaacatatctggtccaaatacaacagcacaa
agtcagtcagaagtatttcttagaaaatgtatgtcagagatgattaatag
agagctgacatgggtggatcaaattctcatgtactgatgatttcagtgaa
ttcataaaaggttactatccagttagatcgcagtactagtttcgaggttg
gaggacaggtccttcta
gaattcaagaccacattaaatcatcatccatcatgttcaataaggacaca
ccgcaggcctgcaagaatgtttcaatatacaaaaattccatcaatataat
ttatcatataaactgaaaaaaattacatgaatatcatatcaggtgatgaa
agatcctttgagaaataataaccccgtttaatcttaaagtctttgaacag
tgacacaaggggcagacctaaacataataaaatcaaaatatatcaagcca
attgccaacattacattaaatggggaaaaatcttaaagcaataccactaa
agcaaagagaagacaaatcaccatattctcccactgtctattcaatgatg
gctagaaaactcaatttcaatgcatttattcatttgtatatgataatacc
aagacaacagtttccttaaagtgtgaggagaaacacaggtctaattgaaa
ttccctattaattggtcaatgaagtagaggaatgaaagtcattactatgc
aagttatagaaaatgagtgaatatgactcagtattactaaaaatgtttta
taggtcatttgtagttatttgcctatataaagtaaaagggagaaaacaat
gttacagatatgtatggagaggttctacctcaaatattagcaataaattc
caagaaaaaaataggtactgatttgaatgggaatattatggagtatatgg
aagtgtttgaatagagaaaaatcgtaaagaatattcaaaatacaaagtat
aatagatgtttggagataatggcactgcgttattttttggacagataaca
atttgaagcaaataaacataatcttaaaaacttatttgaaagtgtgaaat
acccaaacattatacaaataaagtgactacaggtatagtatacaatatca
actatgtcttgagttccaactaaaagacacatatttccacactaataagc
ttttacaagcattgaaatgatgtagagtttggccacctataaaagtgtga
aaagtataacggtttacagataattttaatctcataaaaaataagaatgt
tttatctaccaaagctgtattcaaggtcatcaaaagaataaatttaaatc
ataatcatgcttaatttttcactgaagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_38639605_38640738
seq2: B6Ng01-149A18.g_68_1195

seq1  GAATTCAAGACCACATTAAATCATCATCCATCATGTTCAATAAGGACACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAGACCACATTAAATCATCATCCATCATGTTCAATAAGGACACA  50

seq1  CCGCAGGCCTGCAAGAATGTTTCAATATACAAAAATTCCATCAATATAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGCAGGCCTGCAAGAATGTTTCAATATACAAAAATTCCATCAATATAAT  100

seq1  TTATCATATAAACTGAAAAAAATTACATGAATATCATATCAGGTGATGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCATATAAACTGAAAAAAATTACATGAATATCATATCAGGTGATGAA  150

seq1  AGATCCTTTGAGAAATAATAACCCCGTTTAATCTTAAAGTCTTTGAACAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATCCTTTGAGAAATAATAACCCCGTTTAATCTTAAAGTCTTTGAACAG  200

seq1  TGACACAAGGGGCAGACCTAAACATAATAAAATCAAAATATATCAAGCCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACACAAGGGGCAGACCTAAACATAATAAAATCAAAATATATCAAGCCA  250

seq1  ATTGCCAACATTACATTAAATGGGGAAAAATCTTAAAGCAATACCACTAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGCCAACATTACATTAAATGGGGAAAAATCTTAAAGCAATACCACTAA  300

seq1  AGCAAAGAGAAGACAAATCACCATATTCTCCCACTGTCTATTCAATGATG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAAAGAGAAGACAAATCACCATATTCTCCCACTGTCTATTCAATGATG  350

seq1  GCTAGAAAACTCAATTTCAATGCATTTATTCATTTGTATATGATAATACC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAGAAAACTCAATTTCAATGCATTTATTCATTTGTATATGATAATACC  400

seq1  AAGACAACAGTTTCCTTAAAGTGTGAGGAGAAACACAGGTCTAATTGAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACAACAGTTTCCTTAAAGTGTGAGGAGAAACACAGGTCTAATTGAAA  450

seq1  TTCCCTATTAATTGGTCAATGAAGTAGAGGAATGAAAGTCATTACTATGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCTATTAATTGGTCAATGAAGTAGAGGAATGAAAGTCATTACTATGC  500

seq1  AAGTTATAGAAAATGAGTGAATATGACTCAGTATTACTAAAAATGTTTTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTATAGAAAATGAGTGAATATGACTCAGTATTACTAAAAATGTTTTA  550

seq1  TAGGTCATTTGTAGTTATTTGCCTATATAAAGTAAAAGGGAGAAAACAAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGTCATTTGTAGTTATTTGCCTATATAAAGTAAAAGGGAGAAAACAAT  600

seq1  GTTACAGATATGTATGGAGAGGTTCTACCTCAAATATTAGCAATAAATTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTACAGATATGTATGGAGAGGTTCTACCTCAAATATTAGCAATAAATTC  650

seq1  CAAGAAAAAAATAGGTACTGATTTGAATGGGAATATTATGGAGTATATGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGAAAAAAATAGGTACTGATTTGAATGGGAATATTATGGAGTATATGG  700

seq1  AAGTGTTTGAATAGAGAAAAATCGTAAAGAATATTCAAAATACAAAGTAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGTTTGAATAGAGAAAAATCGTAAAGAATATTCAAAATACAAAGTAT  750

seq1  AATAGATGTTTGGAGATAATGGCACTGCGTTATTTTTTGGACAGATAACA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGATGTTTGGAGATAATGGCACTGCGTTATTTTTTGGACAGATAACA  800

seq1  ATTTGAAGCAAAT-AACATAATCTTAAAAACTTATTTGAAAGTGTGAAAT  849
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  ATTTGAAGCAAATAAACATAATCTTAAAAACTTATTTGAAAGTGTGAAAT  850

seq1  ACCCAAACATTATACAAATAAAGTGACTACAGGTATAGTATACAATATCA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCAAACATTATACAAATAAAGTGACTACAGGTATAGTATACAATATCA  900

seq1  ACTATGTCTTTGAGTTCCAACTAAAAGACACATATTTCCACACTAATAAG  949
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  ACTATGTC-TTGAGTTCCAACTAAAAGACACATATTTCCACACTAATAAG  949

seq1  CTTTTACCAGCATTGAAATGATGTAGAGTTTGG-CACCTAT-AGAGTGTG  997
      ||||||| ||||||||||||||||||||||||| ||||||| | ||||||
seq2  CTTTTACAAGCATTGAAATGATGTAGAGTTTGGCCACCTATAAAAGTGTG  999

seq1  AAAAGTATAAGGTTTAACAGATAATTTTAAATCTTAATAAAAATAAGAAA  1047
      |||||||||| | || |||||||||||| ||||| |  ||||||||| ||
seq2  AAAAGTATAACGGTTTACAGATAATTTT-AATCTCATAAAAAATAAG-AA  1047

seq1  TGTTTTATCTACCAAAGCATGTATTCAATGTCATCCAATAGAATAAATTT  1097
      |||||||||||||||||| ||||||||| ||||| ||| |||||||||| 
seq2  TGTTTTATCTACCAAAGC-TGTATTCAAGGTCAT-CAAAAGAATAAATT-  1094

seq1  ATAATTCATTAATCATGCTTATATTTTCTACTGAAGG  1134
       ||| ||| |||||||||||| |||||  ||||||||
seq2  -TAAATCA-TAATCATGCTTA-ATTTTTCACTGAAGG  1128