BAC Information

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BAC

Clone NameB6Ng01-149B22
Chromosome17 (Build37)
Map Location 26,404,560 - 26,531,024
singlet/doubletdoublet
Overlap geneLuc7l, EG383229
Upstream geneUbe2i, Prss34, Prss28, Prss29, LOC432543, LOC666472, Tpsab1, Mcpt6, Tpsg1, Cacna1h, Tekt4, Sstr5, LOC100042580, Sox8, Tmem112, LOC545396, Gng13, Chtf18, Rpusd1, BC052484, Msln, Narfl, Haghl, Ccdc78, BC008155, Metrn, Fbxl16, Wdr24, 2610003J06Rik, Stub1, Rhbdl1, Rhot2, Wdr90, 9530058B02Rik, 0610011F06Rik, Wfikkn1, Rab40c, LOC100043160, Pigq, F430201B04Rik, D630044L22Rik, Solh, 1700022N22Rik, Rab11fip3, Decr2, Nme4, EG666609, Tmem8, Mrpl28, Axin1, Pdia2, Arhgdig, Rgs11, Itfg3, LOC100042643
Downstream geneEG240055, C230078M08Rik, Dusp1, EG666668, Ergic1, Atp6v0e, A930001N09Rik, Bnip1, Nkx2-5, Kifc1, Phf1, Cuta, Syngap1, Zbtb9, Bak1, Ggnbp1, Itpr3, 2900010M23Rik, Ihpk3, Lemd2, LOC100042713, ENSMUSG00000073430
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-149B22.bB6Ng01-149B22.g
ACCDH945544DH945545
length1,093486
definitionDH945544|Mus musculus domesticus DNA, BAC clone: B6Ng01-149B22, 5' end.DH945545|Mus musculus domesticus DNA, BAC clone: B6Ng01-149B22, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(26,529,938 - 26,531,024)(26,404,560 - 26,405,051)
sequence
gaattcttttgctagctcctccccgaaatttgttctctgtcctctgggtc
atgatcatcccagatgaagtgtactggagtctcactttatcattagcagg
ctgactatacactaccttgggggcttctctctgtcatgggcccattttaa
tcatttggcttatagtctaagacctgtgtcctgccccctcactcctttga
tgatggaaacttcattaatccgaccatggactgtaacacacacacacaca
cagacagacaaacagacagataaacacacacacacagaacacacacacag
atacagagcacatactcacatagacacagaacacacacaaacacagacaa
agatacacagagaatacacacagataaacacagacacacacagatacaca
cacagacaaacacagaaaacaaacacacagacacgcacagagaacacaca
caagatacagaacacaccagaaagacacacacagagaacacatacaaaca
cacaaagagagacagacaacagacaaacacacacatatacactcagagag
aacatacacatacacagtgaaacacacacaggtacacacagagagaacac
acagagaacatacacacacagagaacacaaacaattacagacacgcacac
aaagacacacacaaggacacagacaacagataagaacacacacatacaca
cagaggacacacacaaacacacacagagaaagagagagagaaaaatagac
aaacacatacagaaacagacacaaacacagacagaaatacacaaaagaac
acacacagagacagacaacagacaaacacacacacacatacacagagaaa
cacacacaaacacacaaagagagaagtagacaaacacacagagagaaaca
gacacacacagtatacaaaggacacatacacagacacccagcagtcatcc
acagacacacaaagtgacatattctctcatttgtccccagcccttctgta
atggccttgatctaccaaccctgacagccccacatgccacctccaccgta
ttgagaaataaagcttccaacagtaagtaagggaaaacagtca
acactaaaccaggctggcctcaaactcagatctgctggcctctgccttat
cgctgggataaaggcgtgcaccaccactactggctttttttttttttttc
taaatttttttatgcattttggtattttgcctacttgtatgtgtaccatg
tgcatgtgtgtatggttcccctaggaaactaaatgactctggaactggag
ttaattttctggttgtgagctgtcatgtgagtgctgggaaccaaacttaa
ctcctggaatagcagcaatcattcttaaacactgagccatctttttgatt
ttgttttgttttgtgttttaaacatggtttccctttattgtgctggctga
tctgtagtataaaataatccctctacctgagcttcccagttataggtatc
agccattattcccagctaagaaatgtcttaagataagggaagtattagta
gtcagttacagtggacacatttatgatcccaatttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_26529938_26531024
seq2: B6Ng01-149B22.b_44_1136 (reverse)

seq1  TGACTG--TTCCCTAACTTACTTGTTGGAAGC-TTAATTCTCAATACGGT  47
      ||||||  |||||| |||||| |||||||||| ||| |||||||||||||
seq2  TGACTGTTTTCCCTTACTTAC-TGTTGGAAGCTTTATTTCTCAATACGGT  49

seq1  GGAGGTGGCATGTGGGGCTGTCAGGGTTGGTAGATCAA-GCCATTACAGA  96
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  GGAGGTGGCATGTGGGGCTGTCAGGGTTGGTAGATCAAGGCCATTACAGA  99

seq1  AGGGCTGGGGACAAATGAGAGAATATGTCACTGTGTGTGTCTGTGGATGA  146
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  AGGGCTGGGGACAAATGAGAGAATATGTCACTTTGTGTGTCTGTGGATGA  149

seq1  CTGCTGGGTGTCTGTGTATGTGT-CTTTGTATACTGTGTGTGTCTGTTTC  195
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  CTGCTGGGTGTCTGTGTATGTGTCCTTTGTATACTGTGTGTGTCTGTTTC  199

seq1  TCTCTGTGTGTTTGTCTACTTCTCTCTTTGTGTGTTTGTGTGTG-TTCTC  244
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  TCTCTGTGTGTTTGTCTACTTCTCTCTTTGTGTGTTTGTGTGTGTTTCTC  249

seq1  TGTGTATGTGTGTGTGTGTTTGTCTGTTGTCTGTCTCTGTGTGTGTTC-T  293
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  TGTGTATGTGTGTGTGTGTTTGTCTGTTGTCTGTCTCTGTGTGTGTTCTT  299

seq1  TTGTGTATTTCTGTCTGTGTTTGTGTCTGTTTCTGTATGTGTTTGTCTAT  343
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGTATTTCTGTCTGTGTTTGTGTCTGTTTCTGTATGTGTTTGTCTAT  349

seq1  TTTTCTCTCTCTCTTTCTCTGTGTGTGTTTGTGTGTGTCCTCTGTGTGTA  393
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTCTCTCTCTTTCTCTGTGTGTGTTTGTGTGTGTCCTCTGTGTGTA  399

seq1  TGTGTGTGTTCTTATCTGTTGTCTGTGTCCTTGTGTGTGTCTTTGTGTGC  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTGTTCTTATCTGTTGTCTGTGTCCTTGTGTGTGTCTTTGTGTGC  449

seq1  GTGTCTGTAATTGTTTGTGTTCTCTGTGTGTGTATGTTCTCTGTGTGTTC  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTCTGTAATTGTTTGTGTTCTCTGTGTGTGTATGTTCTCTGTGTGTTC  499

seq1  TCTCTGTGTGTACCTGTGTGTGTTTCACTGTGTATGTGTATGTTCTCTCT  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTGTGTGTACCTGTGTGTGTTTCACTGTGTATGTGTATGTTCTCTCT  549

seq1  GAGTGTATATGTGTGTGTTTGTCTGTTGTCTGTCTCTCTTTGTGTGTTTG  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTGTATATGTGTGTGTTTGTCTGTTGTCTGTCTCTCTTTGTGTGTTTG  599

seq1  TATGTGTTCTCTGTGTGTGTCTTTCTGGTGTGTTCTGTATCTTGTGTGTG  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTGTTCTCTGTGTGTGTCTTTCTGGTGTGTTCTGTATCTTGTGTGTG  649

seq1  TTCTCTGTGCGTGTCTGTGTGTTTGTTTTCTGTGTTTGTCTGTGTGTGTA  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCTGTGCGTGTCTGTGTGTTTGTTTTCTGTGTTTGTCTGTGTGTGTA  699

seq1  TCTGTGTGTGTCTGTGTTTATCTGTGTGTATTCTCTGTGTATCTTTGTCT  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTGTGTGTCTGTGTTTATCTGTGTGTATTCTCTGTGTATCTTTGTCT  749

seq1  GTGTTTGTGTGTGTTCTGTGTCTATGTGAGTATGTGCTCTGTATCTGTGT  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTTGTGTGTGTTCTGTGTCTATGTGAGTATGTGCTCTGTATCTGTGT  799

seq1  GTGTGTTCTGTGTGTGTGTGTTTATCTGTCTGTTTGTCTGTCTGTGTGTG  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTTCTGTGTGTGTGTGTTTATCTGTCTGTTTGTCTGTCTGTGTGTG  849

seq1  TGTGTGTGTTACAGTCCATGGTCGGATTAATGAAGTTTCCATCATCAAAG  893
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTGTTACAGTCCATGGTCGGATTAATGAAGTTTCCATCATCAAAG  899

seq1  GAGTGAGGGGGCAGGACACAGGTCTTAGACTATAAGCCAAATGATTAAAA  943
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTGAGGGGGCAGGACACAGGTCTTAGACTATAAGCCAAATGATTAAAA  949

seq1  TGGGCCCATGACAGAGAGAAGCCCCCAAGGTAGTGTATAGTCAGCCTGCT  993
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGCCCATGACAGAGAGAAGCCCCCAAGGTAGTGTATAGTCAGCCTGCT  999

seq1  AATGATAAAGTGAGACTCCAGTACACTTCATCTGGGATGATCATGACCCA  1043
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGATAAAGTGAGACTCCAGTACACTTCATCTGGGATGATCATGACCCA  1049

seq1  GAGGACAGAGAACAAATTTCGGGGAGGAGCTAGCAAAAGAATTC  1087
      ||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGACAGAGAACAAATTTCGGGGAGGAGCTAGCAAAAGAATTC  1093

seq1: chr17_26404560_26405051
seq2: B6Ng01-149B22.g_69_560

seq1  GAATTCACACTAAACCAGGCTGGCCTCAAACTCAGATCTGCTGGCCTCTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACACTAAACCAGGCTGGCCTCAAACTCAGATCTGCTGGCCTCTG  50

seq1  CCTTATCGCTGGGATAAAGGCGTGCACCACCACTACTGGCTTTTTTTTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTATCGCTGGGATAAAGGCGTGCACCACCACTACTGGCTTTTTTTTTT  100

seq1  TTTTTCTAAATTTTTTTATGCATTTTGGTATTTTGCCTACTTGTATGTGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTCTAAATTTTTTTATGCATTTTGGTATTTTGCCTACTTGTATGTGT  150

seq1  ACCATGTGCATGTGTGTATGGTTCCCCTAGGAAACTAAATGACTCTGGAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATGTGCATGTGTGTATGGTTCCCCTAGGAAACTAAATGACTCTGGAA  200

seq1  CTGGAGTTAATTTTCTGGTTGTGAGCTGTCATGTGAGTGCTGGGAACCAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGAGTTAATTTTCTGGTTGTGAGCTGTCATGTGAGTGCTGGGAACCAA  250

seq1  ACTTAACTCCTGGAATAGCAGCAATCATTCTTAAACACTGAGCCATCTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTAACTCCTGGAATAGCAGCAATCATTCTTAAACACTGAGCCATCTTT  300

seq1  TTGATTTTGTTTTGTTTTGTGTTTTAAACATGGTTTCCCTTTATTGTGCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATTTTGTTTTGTTTTGTGTTTTAAACATGGTTTCCCTTTATTGTGCT  350

seq1  GGCTGATCTGTAGTATAAAATAATCCCTCTACCTGAGCTTCCCAGTTATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGATCTGTAGTATAAAATAATCCCTCTACCTGAGCTTCCCAGTTATA  400

seq1  GGTATCAGCCATTATTCCCAGCTAAGAAATGTCTTAAGATAAGGGAAGTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTATCAGCCATTATTCCCAGCTAAGAAATGTCTTAAGATAAGGGAAGTA  450

seq1  TTAGTAGTCAGTTACAGTGGACACATTTATGATCCCAATTTT  492
      ||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTAGTCAGTTACAGTGGACACATTTATGATCCCAATTTT  492