BAC Information

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BAC

Clone NameB6Ng01-149D05
Chromosome17 (Build37)
Map Location 44,179,659 - 44,357,326
singlet/doubletdoublet
Overlap geneEnpp5, Enpp4, Clic5
Upstream geneTnfrsf21, LOC100043770, Gpr110, Gpr116, Mep1a, LOC100043332, Pla2g7, Tdrd6, Slc25a27, Cyp39a1, Dscr1l1
Downstream geneRunx2, Supt3h, 4930564C03Rik, EG210562
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-149D05.bB6Ng01-149D05.g
ACCDH945605DH945606
length168967
definitionDH945605|Mus musculus domesticus DNA, BAC clone: B6Ng01-149D05, 5' end.DH945606|Mus musculus domesticus DNA, BAC clone: B6Ng01-149D05, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(44,179,659 - 44,179,826)(44,356,365 - 44,357,326)
sequence
attttcatcacaattaggagagttttcttcaggaagattacgtgattccc
ttcatcagatgaatcttggcacaaatgggagagatttcttttcccaaagc
tggaattctaaacatatagatgctctatggtatgtgttggggcagcaggg
gtgggggttggggagggg
gaattctaaggactgggaaccaaccttccaaaagagcacaacactattct
gacctaaggaaaatccacaataaaataaggtaaagccagagtcaggttag
gtcatttagattttaaccctggctctctgctcattgaaatatgaccttga
gcttgccaccgccccccccccccccacacacacacctcccagcactgtcc
tcccttgtgattcatagtgctagaataataatagtcatttcgtatctgac
catgagatagaaggactcaggatgaatggaaagtattatgtgtactgact
ggaatccaagcttcagatggaatgcaggggacatttctttttcttctcat
ccaagttgaatccttgaatggtagagagactctcaagtaattgacattct
tccctttcctatatcactgttcagtgtcttaaaggctccgcttaagaagt
ggtatccctgagtaattcaagacattaaggcagcctttgatccagaggca
gtctctgggaattggcatttaggaaaggtctgctatgggccgtgtgggac
tacacactattctagcctctgccttggcctgaattgcatggtttccaata
gtcaaatgcttccacaaagcaagatttccaccagtgaaaatcatgtgctt
tgtggtttcttttcttttttaattatgtgtgtgtatgtgtgtgtgtgtct
tttgtctacgtgtggggtttgagcatgtgagtgggggcaggggtacacaa
agggccagaggagagcctggatccctttggaactggagtacagagagttt
tgagtccactaagtcagcgcttaaaagtgagcacaagccctctgtaagta
catcaagtgctttcaactgctggcgaaatcttctccggcccaaatatcat
ttcatgttttaaagaaattctttgataaggaatttaatggtccttaaaaa
aatagactctttcttct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_44179659_44179826
seq2: B6Ng01-149D05.b_54_221

seq1  ATTTTCATCACAATTAGGAGAGTTTTCTTCAGGAAGATTACGTGATTCCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTCATCACAATTAGGAGAGTTTTCTTCAGGAAGATTACGTGATTCCC  50

seq1  TTCATCAGATGAATCTTGGCACAAATGGGAGAGATTTCTTTTCCCAAAGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATCAGATGAATCTTGGCACAAATGGGAGAGATTTCTTTTCCCAAAGC  100

seq1  TGGAATTCTAAACATATAGATGCTCTATGGTATGTGTTGGGGCAGCAGGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAATTCTAAACATATAGATGCTCTATGGTATGTGTTGGGGCAGCAGGG  150

seq1  GTGGGGGTTGGGGAGGGG  168
      ||||||||||||||||||
seq2  GTGGGGGTTGGGGAGGGG  168

seq1: chr17_44356365_44357326
seq2: B6Ng01-149D05.g_69_1035 (reverse)

seq1  AGAAGAAAGATGTCTAATTTCTTTAAGGA-CATAAAATTCCTCATCAATG  49
      |||||||||| |||| |||| |||||||| ||| |||||||| ||||| |
seq2  AGAAGAAAGA-GTCT-ATTTTTTTAAGGACCATTAAATTCCTTATCAAAG  48

seq1  AATTTCTTTAAAACATGAAATGATATTTGGGGCTGGAG-AGATTTCG-CA  97
      |||||||||||||||||||||||||||| |||| |||| |||||||| ||
seq2  AATTTCTTTAAAACATGAAATGATATTT-GGGCCGGAGAAGATTTCGCCA  97

seq1  GCAGTTGAAAGCACTTGATGTTCTTACAGAGGGCTTGTGCTCACTTCTTA  147
      ||||||||||||||||||||| |||||||||||||||||||||||| | |
seq2  GCAGTTGAAAGCACTTGATGTACTTACAGAGGGCTTGTGCTCACTTTTAA  147

seq1  GCGCTGACTTAGTGG-CTCACAACTCTCTGTAACTCCAGTTCC-AAGGGA  195
      ||||||||||||||| |||| |||||||||| ||||||||||| ||||||
seq2  GCGCTGACTTAGTGGACTCAAAACTCTCTGT-ACTCCAGTTCCAAAGGGA  196

seq1  TCCAGGCTCTCCTCTGG-CCTTTGTGTACCCCTGCCCCCACTCACATGCT  244
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  TCCAGGCTCTCCTCTGGCCCTTTGTGTACCCCTGCCCCCACTCACATGCT  246

seq1  CAAA-CCCACACGTAGAC-AAAGACACACACACACATACACACACATAAT  292
      |||| ||||||||||||| |||||||||||||||||||||||||||||||
seq2  CAAACCCCACACGTAGACAAAAGACACACACACACATACACACACATAAT  296

seq1  T-AAAAAGAAAAGAAACCACAAAGCACATGATTTTCACTGGTGGAAATCT  341
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAAAGAAAAGAAACCACAAAGCACATGATTTTCACTGGTGGAAATCT  346

seq1  TGCTTTGTGGAAGCATTTGACTATTGGAAACCATGCAATTCAGGCCAAGG  391
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTTGTGGAAGCATTTGACTATTGGAAACCATGCAATTCAGGCCAAGG  396

seq1  CAGAGGCTAGAATAGTGTGTAGTCCCACACGGCCCATAGCAGACCTTTCC  441
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGGCTAGAATAGTGTGTAGTCCCACACGGCCCATAGCAGACCTTTCC  446

seq1  TAAATGCCAATTCCCAGAGACTGCCTCTGGATCAAAGGCTGCCTTAATGT  491
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATGCCAATTCCCAGAGACTGCCTCTGGATCAAAGGCTGCCTTAATGT  496

seq1  CTTGAATTACTCAGGGATACCACTTCTTAAGCGGAGCCTTTAAGACACTG  541
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGAATTACTCAGGGATACCACTTCTTAAGCGGAGCCTTTAAGACACTG  546

seq1  AACAGTGATATAGGAAAGGGAAGAATGTCAATTACTTGAGAGTCTCTCTA  591
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGTGATATAGGAAAGGGAAGAATGTCAATTACTTGAGAGTCTCTCTA  596

seq1  CCATTCAAGGATTCAACTTGGATGAGAAGAAAAAGAAATGTCCCCTGCAT  641
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTCAAGGATTCAACTTGGATGAGAAGAAAAAGAAATGTCCCCTGCAT  646

seq1  TCCATCTGAAGCTTGGATTCCAGTCAGTACACATAATACTTTCCATTCAT  691
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATCTGAAGCTTGGATTCCAGTCAGTACACATAATACTTTCCATTCAT  696

seq1  CCTGAGTCCTTCTATCTCATGGTCAGATACGAAATGACTATTATTATTCT  741
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGAGTCCTTCTATCTCATGGTCAGATACGAAATGACTATTATTATTCT  746

seq1  AGCACTATGAATCACAAGGGAGGACAGTGCTGGGAGGTGTGTGTGTGGGG  791
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACTATGAATCACAAGGGAGGACAGTGCTGGGAGGTGTGTGTGTGGGG  796

seq1  GGGGGGGGGGCGGTGGCAAGCTCAAGGTCATATTTCAATGAGCAGAGAGC  841
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGGGGGGGCGGTGGCAAGCTCAAGGTCATATTTCAATGAGCAGAGAGC  846

seq1  CAGGGTTAAAATCTAAATGACCTAACCTGACTCTGGCTTTACCTTATTTT  891
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGTTAAAATCTAAATGACCTAACCTGACTCTGGCTTTACCTTATTTT  896

seq1  ATTGTGGATTTTCCTTAGGTCAGAATAGTGTTGTGCTCTTTTGGAAGGTT  941
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTGGATTTTCCTTAGGTCAGAATAGTGTTGTGCTCTTTTGGAAGGTT  946

seq1  GGTTCCCAGTCCTTAGAATTC  962
      |||||||||||||||||||||
seq2  GGTTCCCAGTCCTTAGAATTC  967