BAC Information

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BAC

Clone NameB6Ng01-149L04
Chromosome17 (Build37)
Map Location 91,615,266 - 91,735,216
singlet/doubletdoublet
Overlap geneLOC627235
Upstream geneNrxn1, EG668871, LOC668872
Downstream geneLOC100043741, LOC100043742, EG640442
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-149L04.bB6Ng01-149L04.g
ACCDH945965DH945966
length1,0611,071
definitionDH945965|Mus musculus domesticus DNA, BAC clone: B6Ng01-149L04, 5' end.DH945966|Mus musculus domesticus DNA, BAC clone: B6Ng01-149L04, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(91,615,266 - 91,616,330)(91,734,137 - 91,735,216)
sequence
gaattctttgttcagttctgagccccattttttaatggggttatttgatt
ttctgaagtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtgaagatcctttcccaatctgttggtggtct
ttttgtcttattgacggtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcaattctcgatcttatagcacaagccattgctgtt
ctgttcaggaatttttcccctgtgcccatgtcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttccttga
tccacttagatttgaccacttagatttctgaatttgaggccagcctgctc
tacagagttagttccaggatagccagggctatacagtgaaaccctgtttt
aaaaagtaaaaaaaaaaaaaaaaaaaaaaaaaaaaaacaaaaaaaaaaac
aagtgaatgagacattgtaagattccaagtacactactaaggcagggaat
taagagttactgggaggaagtgtctgacactaggactgagatgagatctc
tattttttttccagtgactctctaaggcaggtccactcaggagcatgggc
tgcaaaagcagcagagtagctgggacaggggtctacaggattacatctgc
agccaggaggtggggctgttacacacactttgtgcactggtcttgctagg
aaagagctggtctcccaggagtgttgacacaggcttacagacttacagga
ggaaaaaactccagccaaagatagcaagaacatctaacactttagattac
cagacagcacacctggaaagcttctagaacaaaggaggcaaattcaccaa
ggagtgtacatggcagaaaataatcaaattcagagctgaaatcaccagtg
gaaacaaaaagaacttattccaaagaatcactaaaccaggaactggtact
tgaagaaatcaacaaataaattaaacccttagcagactaactagagggca
agagacggtat
gaattcttcatagagcaagaattgtcttagaagcagtacagaagtctctg
acttatcagcacgggtatgttctctttctcgccattacaatatgttcttt
gttctccctttctgaccaacagtgtaataactaagttttaagttatatat
cattagaaaaagagagaggcatctaaggcagtcaggacactaaatagtga
aatacttacaagatccaggaaagtggggccagcaggaaagagcaaagtag
aaatattaagtacccaggctactggacaggaataagtgaatataaattta
aattgaaggatttattaacataacaacaacaacctaagacagacccttgg
aaagggccttagtcctttgttatattgattcttgcacattcaggaaattt
agtatttcacatttatgatagagaaaagttatgtaaaaatattagaagtg
atagagaataataaaaaccctcaaggaattgcacatgttagagtgaatgt
accatataatggtcaaaaatcttactaagtggttactttgatacaaggtc
gatgcatttgtcgaaacagcaagaatacactggttcaaagaaatactaac
atttttacaaagttcaatggtgacaatcttgtataagccaaggttaaagt
ggaaagactcacagacctagcttttgaatagcaatgagaaatactacctt
acaagaagtagaggctttgtgggtgtacttaaaaagcaaggataagaagt
tgcaaatactgttttaaatactaaatgagaatgagaatcagaagggcttc
acttgcaaagacctatgagataatgaaacagtgtagtcatgggaataaga
tagatgggcactgttactatgcaaaccaaataagtcaataattgaccatt
aggaagcctaaggaaactgcttaggtaaagtattttcttttttcatctaa
gatctcaaatgaaaaccattcctcaatgaaaaggctaatggtctgtgagg
aagaatcatgtatagacatgcaataaatgcatagaaatttgctctttcaa
aaatatcatacaaatatttag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_91615266_91616330
seq2: B6Ng01-149L04.b_43_1103

seq1  GAATTCTTTGTTCAGTTCTGAGCCCCATTTTTTAATGGGGTTATTTGATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTGTTCAGTTCTGAGCCCCATTTTTTAATGGGGTTATTTGATT  50

seq1  TTCTGAAGTCCACCTTCTTGAGTTCTTTATATATGTTGGATATTAGTCCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGAAGTCCACCTTCTTGAGTTCTTTATATATGTTGGATATTAGTCCC  100

seq1  CTATCTGATTTAGGATAGGTGAAGATCCTTTCCCAATCTGTTGGTGGTCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATCTGATTTAGGATAGGTGAAGATCCTTTCCCAATCTGTTGGTGGTCT  150

seq1  TTTTGTCTTATTGACGGTGTCTTTTGCCTTGCAGAAACTTTGGAGTTTCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGTCTTATTGACGGTGTCTTTTGCCTTGCAGAAACTTTGGAGTTTCA  200

seq1  TTAGGTCCCATTTGTCAATTCTCGATCTTATAGCACAAGCCATTGCTGTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGGTCCCATTTGTCAATTCTCGATCTTATAGCACAAGCCATTGCTGTT  250

seq1  CTGTTCAGGAATTTTTCCCCTGTGCCCATGTCTTCAAGGCTTTTCCCCAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTCAGGAATTTTTCCCCTGTGCCCATGTCTTCAAGGCTTTTCCCCAC  300

seq1  TTTCTCCTCTATAAGTTTCAGTGTCTCTGGTTTTATGTGAAGTTCCTTGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTCCTCTATAAGTTTCAGTGTCTCTGGTTTTATGTGAAGTTCCTTGA  350

seq1  TCCACTTAGATTTGACCACTTAGATTTCTGAATTTGAGGCCAGCCTGCTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACTTAGATTTGACCACTTAGATTTCTGAATTTGAGGCCAGCCTGCTC  400

seq1  TACAGAGTTAGTTCCAGGATAGCCAGGGCTATACAGTGAAACCCTGTTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGAGTTAGTTCCAGGATAGCCAGGGCTATACAGTGAAACCCTGTTTT  450

seq1  AAAAAGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACAAAAAAAAAAAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACAAAAAAAAAAAC  500

seq1  AAGTGAATGAGACATTGTAAGATTCCAAGTACACTACTAAGGCAGGGAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGAATGAGACATTGTAAGATTCCAAGTACACTACTAAGGCAGGGAAT  550

seq1  TAAGAGTTACTGGGAGGAAGTGTCTGACACTAGGACTGAGATGAGATCTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGAGTTACTGGGAGGAAGTGTCTGACACTAGGACTGAGATGAGATCTC  600

seq1  TATTTTTTTTCCAGTGACTCTCTAAGGCAGGTCCACTCAGGAGCATGGGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTTTTTCCAGTGACTCTCTAAGGCAGGTCCACTCAGGAGCATGGGC  650

seq1  TGCAGAAGCAGCAGAGTAGCTGGGACAGGGGTCTACAGGATTACATCTGC  700
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAAAAGCAGCAGAGTAGCTGGGACAGGGGTCTACAGGATTACATCTGC  700

seq1  AGCCAGGAGGTGGGGCTGTTACACACACTTTGTGCACTGGTCTTGCTAGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCAGGAGGTGGGGCTGTTACACACACTTTGTGCACTGGTCTTGCTAGG  750

seq1  AAAGAGCTGGTCTCCCAGGAGTGTTGACACAGGCTTACAGACCTACAGGA  800
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  AAAGAGCTGGTCTCCCAGGAGTGTTGACACAGGCTTACAGACTTACAGGA  800

seq1  GGAAAAAACTCCAGCCAAAGATAGCAAGAACATCTAACACTTTAGATTAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAAAACTCCAGCCAAAGATAGCAAGAACATCTAACACTTTAGATTAC  850

seq1  CAGACAGCACACCT-GAAAGC-TCTAGAACAAAAGGAGGCAAATTCACCA  898
      |||||||||||||| |||||| |||||||| |||||||||||||||||||
seq2  CAGACAGCACACCTGGAAAGCTTCTAGAAC-AAAGGAGGCAAATTCACCA  899

seq1  AAGAGTAGTACATGGCAGAAAATAATCAAAATCAGAGCTGAAATCAACCA  948
      | |||| ||||||||||||||||||||||| |||||||||||||||  | 
seq2  AGGAGT-GTACATGGCAGAAAATAATCAAATTCAGAGCTGAAATCA--CC  946

seq1  AGTGGAAACAAAAAGAACT--ATACAAAGAATCAACTAAACCAGGAACTG  996
      |||||||||||||||||||   | ||||||||| ||||||||||||||||
seq2  AGTGGAAACAAAAAGAACTTATTCCAAAGAATC-ACTAAACCAGGAACTG  995

seq1  GTACTTTGAGAAAATCAACAAAATAAATAAACCCTTAGCCAGACTAACTA  1046
      |||| ||||  |||||||||||  || ||||||||||| |||||||||||
seq2  GTAC-TTGAAGAAATCAACAAATAAATTAAACCCTTAG-CAGACTAACTA  1043

seq1  GAGGGCACAGAGACAGTAT  1065
      ||||||| |||||| ||||
seq2  GAGGGCA-AGAGACGGTAT  1061

seq1: chr17_91734137_91735216
seq2: B6Ng01-149L04.g_66_1136 (reverse)

seq1  CTAAATATTTGTATGATAATTTTTGGAAAAGAGCAAAATTTCTATGCATT  50
      ||||||||||||||||| |||||||  ||||||| |||||||||||||||
seq2  CTAAATATTTGTATGAT-ATTTTTG--AAAGAGC-AAATTTCTATGCATT  46

seq1  TATTTGCCATGTCTATACATGATTCTTCCTCACAGACCATTAGCCTTTTC  100
      ||||   |||||||||||||||||||||||||||||||||||||||||||
seq2  TATT--GCATGTCTATACATGATTCTTCCTCACAGACCATTAGCCTTTTC  94

seq1  ATTGAGGAATGGGTTTTCATTTTGAGATCTTAGATGAAAAAAGAAAATAA  150
      |||||||||| |||||||| |||||||||||||||||||||||||||| |
seq2  ATTGAGGAAT-GGTTTTCA-TTTGAGATCTTAGATGAAAAAAGAAAAT-A  141

seq1  CTTTACCTAAGCAGTTTCCTTAGGCTTCCTAATGGTCAATTATTGACTTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTACCTAAGCAGTTTCCTTAGGCTTCCTAATGGTCAATTATTGACTTA  191

seq1  TTTGGTTTGCATAGTAACAGTGCCCATCTATCTTATTCCCATGACTACAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGTTTGCATAGTAACAGTGCCCATCTATCTTATTCCCATGACTACAC  241

seq1  TGTTTCATTATCTCATAGGTCTTTGCAAGTGAAGCCCTTCTGATTCTCAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTCATTATCTCATAGGTCTTTGCAAGTGAAGCCCTTCTGATTCTCAT  291

seq1  TCTCATTTAGTATTTAAAACAGTATTTGCAACTTCTTATCCTTGCTTTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCATTTAGTATTTAAAACAGTATTTGCAACTTCTTATCCTTGCTTTTT  341

seq1  AAGTACACCCACAAAGCCTCTACTTCTTGTAAGGTAGTATTTCTCATTGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTACACCCACAAAGCCTCTACTTCTTGTAAGGTAGTATTTCTCATTGC  391

seq1  TATTCAAAAGCTAGGTCTGTGAGTCTTTCCACTTTAACCTTGGCTTATAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCAAAAGCTAGGTCTGTGAGTCTTTCCACTTTAACCTTGGCTTATAC  441

seq1  AAGATTGTCACCATTGAACTTTGTAAAAATGTTAGTATTTCTTTGAACCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATTGTCACCATTGAACTTTGTAAAAATGTTAGTATTTCTTTGAACCA  491

seq1  GTGTATTCTTGCTGTTTCGACAAATGCATCGACCTTGTATCAAAGTAACC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTATTCTTGCTGTTTCGACAAATGCATCGACCTTGTATCAAAGTAACC  541

seq1  ACTTAGTAAGATTTTTGACCATTATATGGTACATTCACTCTAACATGTGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTAGTAAGATTTTTGACCATTATATGGTACATTCACTCTAACATGTGC  591

seq1  AATTCCTTGAGGGTTTTTATTATTCTCTATCACTTCTAATATTTTTACAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCCTTGAGGGTTTTTATTATTCTCTATCACTTCTAATATTTTTACAT  641

seq1  AACTTTTCTCTATCATAAATGTGAAATACTAAATTTCCTGAATGTGCAAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTTTCTCTATCATAAATGTGAAATACTAAATTTCCTGAATGTGCAAG  691

seq1  AATCAATATAACAAAGGACTAAGGCCCTTTCCAAGGGTCTGTCTTAGGTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCAATATAACAAAGGACTAAGGCCCTTTCCAAGGGTCTGTCTTAGGTT  741

seq1  GTTGTTGTTATGTTAATAAATCCTTCAATTTAAATTTATATTCACTTATT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGTTGTTATGTTAATAAATCCTTCAATTTAAATTTATATTCACTTATT  791

seq1  CCTGTCCAGTAGCCTGGGTACTTAATATTTCTACTTTGCTCTTTCCTGCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTCCAGTAGCCTGGGTACTTAATATTTCTACTTTGCTCTTTCCTGCT  841

seq1  GGCCCCACTTTCCTGGATCTTGTAAGTATTTCACTATTTAGTGTCCTGAC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCCCACTTTCCTGGATCTTGTAAGTATTTCACTATTTAGTGTCCTGAC  891

seq1  TGCCTTAGATGCCTCTCTCTTTTTCTAATGATATATAACTTAAAACTTAG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTTAGATGCCTCTCTCTTTTTCTAATGATATATAACTTAAAACTTAG  941

seq1  TTATTACACTGTTGGTCAGAAAGGGAGAACAAAGAACATATTGTAATGGC  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTACACTGTTGGTCAGAAAGGGAGAACAAAGAACATATTGTAATGGC  991

seq1  GAGAAAGAGAACATACCCGTGCTGATAAGTCAGAGACTTCTGTACTGCTT  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAAGAGAACATACCCGTGCTGATAAGTCAGAGACTTCTGTACTGCTT  1041

seq1  CTAAGACAATTCTTGCTCTATGAAGAATTC  1080
      ||||||||||||||||||||||||||||||
seq2  CTAAGACAATTCTTGCTCTATGAAGAATTC  1071