BAC Information

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BAC

Clone NameB6Ng01-151E19
Chromosome17 (Build37)
Map Location 83,139,236 - 83,139,563
singlet/doubletsinglet
Overlap genenone
Upstream geneEG668832, LOC100043707, LOC625467, LOC668836, EG433141, EG625514
Downstream geneLOC100043711, LOC100043900, AW548124, EG545226, Eml4, Cox7a2l, Kcng3, Mta3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-151E19.bB6Ng01-151E19.g
ACCDH947155DH947156
length1,248341
definitionDH947155|Mus musculus domesticus DNA, BAC clone: B6Ng01-151E19, 5' end.DH947156|Mus musculus domesticus DNA, BAC clone: B6Ng01-151E19, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctctgcccactgaaactaaggagagagctaccctcccaggtctgc
ttatagaggctaacagagtcacctgaagagcaagctcttaacagtgacaa
ctataacagctagcttcagagattaccagatggcgaaaggcaaacggaag
aaccctactaacaaaaatcaagaccaatcaccatcgtcagaacgcagcac
tcccaccccacctagtcctgggcaccccaacacaaccgaaaatctagacc
cagatttaaatttaaacatttctcatgatgatgatagaagacatcaagaa
ggactttcataagtcacttaaagaattacaggagagcactgctaaagagt
tacaggcccttaaagaaaagcaggaaaacacaaccaaacaggtagaagtc
cttaaagaaaaacaggaaaacacatccaaacaggtgatggaaatgaacaa
aaccatactagaactaaaaggggaagtagacacaataaagaaaacccaaa
gcgaggcaacgctggagatagaaaccctaggaaagagatctggaaccata
gatgcgagcatcagcaacagaatacaagaaatggaagagagaatctcagg
cgcagaagattccatagagaacatcggagcagcaatcaaagataatagaa
aatgcaaaaagatcctaactaaaaacatccaggaaatccaggacacaatg
agaagaccaaacctacggataataggagttgatgagaatgaagattttca
acttaaagggccagctaatatcttcaacaaaataataaaagaaaacttcc
caaacataaagaaagacatgcccatgatcatacaagaagcctacagaact
ccaaatagactgaaccagaaatttctccagacacataataatcagaacaa
caaatgcactaaataaagatagaatattaaaagcagtaagggagaaaggt
caagtaacatataaaggaagcctatcagaattacaccagacttttcacca
gagtctatgaaagcagagagcctagacagatgttatacagacactaagag
aacaaaaatgccagtcaggctactatacccggcaactctcattaccatag
atggagaaaccaaagtattccacgacaaacaaattcactcaatatcttca
ggatcagccttcaaagataataaccgaaagagccattcagattgaacttc
aggctctggacagctaggagggtaatcctctctcatcaatccagaaag
ttaaaagcatccacaatggcagggatgaaggtgggatcaggacaagaaag
gatgggtgtcctgggctcagtgagtgcactctctaaagaccaaggtaaac
tttctaactctcttcctaaaatggttgcattctttacaaaattatttatt
tcccttttttttctgttcttgctggccattgcttgggtatgttttttttt
tcccccaaagttagatccatggatgaggttgcttaaaaattacgttcact
cctgaagactggcacctttcatccaagtcaatcaacagagaaggtgtgtg
agtgtgtgttatccccccccctttctgtatgtgtgtgtgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_83139236_83139563
seq2: B6Ng01-151E19.g_68_414 (reverse)

seq1  --CACACACACACAC-----------------ACACACACTCACACACCT  31
        |||||||||| ||                 ||||||||||||||||||
seq2  CACACACACACATACAGAAAGGGGGGGGGATAACACACACTCACACACCT  50

seq1  TCTCTGTTGATTGACTTGGATGAAAGGTGCCAGTCTTCAGGAGTGAACGT  81
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTGTTGATTGACTTGGATGAAAGGTGCCAGTCTTCAGGAGTGAACGT  100

seq1  AATTTTTAAGCAACCTCATCCATGGATCTAACTTTGGGGGAAAAAAAAAA  131
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTTTAAGCAACCTCATCCATGGATCTAACTTTGGGGGAAAAAAAAAA  150

seq1  CATACCCAAGCAATGGCCAGCAAGAACAGAAAAAAAAGGGAAATAAATAA  181
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATACCCAAGCAATGGCCAGCAAGAACAGAAAAAAAAGGGAAATAAATAA  200

seq1  TTTTGTAAAGAATGCAACCATTTTAGGAAGAGAGTTAGAAAGTTTACCTT  231
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGTAAAGAATGCAACCATTTTAGGAAGAGAGTTAGAAAGTTTACCTT  250

seq1  GGTCTTTAGAGAGTGCACTCACTGAGCCCAGGACACCCATCCTTTCTTGT  281
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCTTTAGAGAGTGCACTCACTGAGCCCAGGACACCCATCCTTTCTTGT  300

seq1  CCTGATCCCACCTTCATCCCTGCCATTGTGGATGCTTTTAAGAATTC  328
      |||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGATCCCACCTTCATCCCTGCCATTGTGGATGCTTTTAAGAATTC  347