BAC Information

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BAC

Clone NameB6Ng01-151J16
Chromosome17 (Build37)7 (Build37)
Map Location 59,848,840 - 59,850,08968,330,995 - 68,331,545
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneLOC668648, 2610034M16Rik, Nudt12, 4930505H01Rik, LOC100043537, LOC100043542
Downstream geneLOC100043549
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-151J16.bB6Ng01-151J16.g
ACCDH947382DH947383
length1,220894
definitionDH947382|Mus musculus domesticus DNA, BAC clone: B6Ng01-151J16, 5' end.DH947383|Mus musculus domesticus DNA, BAC clone: B6Ng01-151J16, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(59,848,840 - 59,850,089)(68,330,995 - 68,331,545)
sequence
gaattcaaccctaaaattattttcattattatttcacaactataattttg
ttacttatgattcataatttaagtgtctgatatacagatggtcttatgtg
actccggtgaaagaattggttgatcccaaaggaatcaccaactacagatt
gagtaccacttagagaacttaactctggctgctagttatcgctctgtttc
tctgcccatccctgccttcctcttcccccaacctctttctcatgtgtgtg
tgtgtgtggagaactgtttcagaaatgaggttgtcttcattaagatatcc
ctgttgctacaacaagaatgtagaatcaatgatttttacagatttttcat
gctgaaaatgatgtggaaaaagtagaaaaaccaatactctgaaaattaat
tataacttggtaaactataggcaagaacacttgccctatttttgcatgta
tgaacaaacttatgtacaattgtttaataaatattaaactatgaaaccta
taataatttgtctcaaaagtgtgcgcaggagccactccttgtatctaacc
gtgaccttcactgtttattcatttaacaactctgtccacacaaaagctct
gcagcatttgttttatttgtttttgtggtccatcttctgtccagaaaata
caatatacttagggaaataaactggagaggatttgttatctataagtaga
agtttgaaacccagaatatgtataaaaaatcttaaattttaaggctgttc
ttttagacttatggtaacaatttctttataagatattacaatacattata
acatattacaatattgcaatataatatattacaatagtaatgtgggggat
gaacgttgagcagaacagaattgaaagtttttgtgacacatagaaaattt
ccattgaaattcctgtaagctaatgagaattgaaaacagagatttagaca
taattatttgaaagctacatactatatttctcaaaagacaggataatgtt
agggaatatatagatagtcatatatctgagaaatatattgaccatctact
agaggacatatgattgacaacctacgtatgattcttccaacagaaataat
atttttaagactcaaattttatttagttgcgaattatccagacaactgaa
ttcccatttctcaggagagattgagaactttctataattctgccaatgcc
attttgttcaaataatttaa
gaattcctgatctttccagaacttttatcatgaatgggtgttggatcttg
tcaaatgctttttctgcatccaaggagatgatcatgtggtttttgtcttt
gagtttgtttatatagtggattacattgatggattttcgtatattaaacc
atccctgcattcctggaataaaacctacttggtcaggatggatgattgct
ttaatgtgatcttggattcggttagcgagaattttattgaggatttttgc
atcgatattcataagagaaattggtctgaagttctctatctttgttggat
ctttctgtggtttaggtatcagagtaatagtggcttcataaaatgagttg
ggtagagtactttctacttctatcttgtgaaaaagtttgtgcagaactgg
aattagatcttctttgaaggtctgatagaactctgcactaaacccgtctg
gtcctgggctttttttggctgggagactatttataactgcttctatttct
ttaggggatatgggactgtttagaaggtcaacttgatcctgattcaactt
tggtacctggtatctgtccagaaatttgtccatttcgtccaggttttcca
gttttgttgagtatagccttttgtagaaggatctgatggtgttttggatt
tcttcaggatctgttgttatgtctccctttttcagttctgattttggtta
attaggatttttgtctctgtgccctctagtgagtctagctaaagggttta
tctatcttgttgattttctcaagaaccaactcctcgtttggttaattctt
ttgaatagtcttcttgtttccccttggttgatttcaccccgagttgatta
tttcctgcctctactcctcttggggtgaattgcttccctttttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_59848840_59850089
seq2: B6Ng01-151J16.b_43_1262 (reverse)

seq1  TTAAATATATTGAACAAAATTGCCATTTTGCCAGAAAATTTTAGGAGAAG  50
      ||||||   ||||||||||| ||    ||| |||  |||| |||   |||
seq2  TTAAATTATTTGAACAAAATGGC---ATTGGCAG--AATTATAG--AAAG  43

seq1  TTCTTCATTCTTTCCTCCTTGAGAAAATGGGAATTCAGTTGTCTTGATAT  100
      ||| ||| ||| |||    |||| |||||||||||||||||||| |  ||
seq2  TTC-TCAATCTCTCC----TGAG-AAATGGGAATTCAGTTGTCTGG--AT  85

seq1  AATTTCTGCAACTAAAATAATATTTGAGTCTTAAAAATATTAATTTTCTG  150
      ||||   |||||| |||||| |||||||||||||||||||||  ||||||
seq2  AATT--CGCAACT-AAATAAAATTTGAGTCTTAAAAATATTA--TTTCTG  130

seq1  TTGTGAGAATCATACGTATGTTGTCAATCATATGT-CTCTAGTAAGATTG  199
      |||  ||||||||||||| |||||||||||||||| ||||||| |||| |
seq2  TTGGAAGAATCATACGTAGGTTGTCAATCATATGTCCTCTAGT-AGATGG  179

seq1  TGTCCAATATTATTTCCTTCAGATATATGACTTATCTAATATTATTCCCT  249
      |   ||||| ||||||  ||||||||||||| ||||| ||| ||||||||
seq2  T---CAATA-TATTTC--TCAGATATATGAC-TATCT-ATA-TATTCCCT  220

seq1  AACATTATCCTGTTCTTTTGAGAAATATAGTATGTAGCTTTTCAAATAAT  299
      |||||||||||| ||||||||||||||||||||||||| |||||||||||
seq2  AACATTATCCTG-TCTTTTGAGAAATATAGTATGTAGC-TTTCAAATAAT  268

seq1  TATGTCTAAATCTCTGTTTTC-ATTCTCATTAGCTTACAGGAATTTCAAT  348
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  TATGTCTAAATCTCTGTTTTCAATTCTCATTAGCTTACAGGAATTTCAAT  318

seq1  GGAAATTTTCTATGTGTCACAAAAACTTTCAATTCTGTTCTGCTCAACGT  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAATTTTCTATGTGTCACAAAAACTTTCAATTCTGTTCTGCTCAACGT  368

seq1  TCATCCCCCACATTACTATTGTAATATATTATATTGCAATATTGTAATAT  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCCCCCACATTACTATTGTAATATATTATATTGCAATATTGTAATAT  418

seq1  GTTATAATGTATTGTAATATCTTATAAAGAAATTGTTACCATAAGTCTAA  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTATAATGTATTGTAATATCTTATAAAGAAATTGTTACCATAAGTCTAA  468

seq1  AAGAACAGCCTTAAAATTTAAGATTTTTTATACATATTCTGGGTTTCAAA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAACAGCCTTAAAATTTAAGATTTTTTATACATATTCTGGGTTTCAAA  518

seq1  CTTCTACTTATAGATAACAAATCCTCTCCAGTTTATTTCCCTAAGTATAT  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTACTTATAGATAACAAATCCTCTCCAGTTTATTTCCCTAAGTATAT  568

seq1  TGTATTTTCTGGACAGAAGATGGACCACAAAAACAAATAAAACAAATGCT  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATTTTCTGGACAGAAGATGGACCACAAAAACAAATAAAACAAATGCT  618

seq1  GCAGAGCTTTTGTGTGGACAGAGTTGTTAAATGAATAAACAGTGAAGGTC  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGAGCTTTTGTGTGGACAGAGTTGTTAAATGAATAAACAGTGAAGGTC  668

seq1  ACGGTTAGATACAAGGAGTGGCTCCTGCGCACACTTTTGAGACAAATTAT  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGGTTAGATACAAGGAGTGGCTCCTGCGCACACTTTTGAGACAAATTAT  718

seq1  TATAGGTTTCATAGTTTAATATTTATTAAACAATTGTACATAAGTTTGTT  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGGTTTCATAGTTTAATATTTATTAAACAATTGTACATAAGTTTGTT  768

seq1  CATACATGCAAAAATAGGGCAAGTGTTCTTGCCTATAGTTTACCAAGTTA  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATACATGCAAAAATAGGGCAAGTGTTCTTGCCTATAGTTTACCAAGTTA  818

seq1  TAATTAATTTTCAGAGTATTGGTTTTTCTACTTTTTCCACATCATTTTCA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTAATTTTCAGAGTATTGGTTTTTCTACTTTTTCCACATCATTTTCA  868

seq1  GCATGAAAAATCTGTAAAAATCATTGATTCTACATTCTTGTTGTAGCAAC  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGAAAAATCTGTAAAAATCATTGATTCTACATTCTTGTTGTAGCAAC  918

seq1  AGGGATATCTTAATGAAGACAACCTCATTTCTGAAACAGTTCTCCACACA  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGATATCTTAATGAAGACAACCTCATTTCTGAAACAGTTCTCCACACA  968

seq1  CACACACACATGAGAAAGAGGTTGGGGGAAGAGGAAGGCAGGGATGGGCA  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACATGAGAAAGAGGTTGGGGGAAGAGGAAGGCAGGGATGGGCA  1018

seq1  GAGAAACAGAGCGATAACTAGCAGCCAGAGTTAAGTTCTCTAAGTGGTAC  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAACAGAGCGATAACTAGCAGCCAGAGTTAAGTTCTCTAAGTGGTAC  1068

seq1  TCAATCTGTAGTTGGTGATTCCTTTGGGATCAACCAATTCTTTCACCGGA  1148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATCTGTAGTTGGTGATTCCTTTGGGATCAACCAATTCTTTCACCGGA  1118

seq1  GTCACATAAGACCATCTGTATATCAGACACTTAAATTATGAATCATAAGT  1198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCACATAAGACCATCTGTATATCAGACACTTAAATTATGAATCATAAGT  1168

seq1  AACAAAATTATAGTTGTGAAATAATAATGAAAATAATTTTAGGGTTGAAT  1248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAAATTATAGTTGTGAAATAATAATGAAAATAATTTTAGGGTTGAAT  1218

seq1  TC  1250
      ||
seq2  TC  1220

seq1: chr7_68330995_68331545
seq2: B6Ng01-151J16.g_411_961 (reverse)

seq1  AAAAAAAGGAAGCAAATTCA-CCCAAGAGGAGTAGACGGCAGGAAATAAT  49
      |||||| |||||| |||||| ||||||||||||||| |||||||||||||
seq2  AAAAAAGGGAAGC-AATTCACCCCAAGAGGAGTAGA-GGCAGGAAATAAT  48

seq1  CAAACTCAGGGGTGAAATCAACCAAGTGGAAACAAGAAGAACTATTC-AA  98
      | ||||| |||||||||||||||||| |||||||||||| ||||||| ||
seq2  C-AACTC-GGGGTGAAATCAACCAAGGGGAAACAAGAAG-ACTATTCAAA  95

seq1  AGAATTAACCAAACGAGGAGTTGGTTCTTTGAGAAAATCAACAAGATAGA  148
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  AGAATTAACCAAACGAGGAGTTGGTTC-TTGAGAAAATCAACAAGATAGA  144

seq1  TAAACCC-TTAGCTAGACTCACTAGAGGGCACAGAGAC-AAAATCCTAAT  196
      ||||||| |||||||||||||||||||||||||||||| |||||||||||
seq2  TAAACCCTTTAGCTAGACTCACTAGAGGGCACAGAGACAAAAATCCTAAT  194

seq1  TAA-CAAAATCAGAACTG-AAAAGGGAGACATAACAACAGATCCTGAAGA  244
      ||| |||||||||||||| |||||||||||||||||||||||||||||||
seq2  TAACCAAAATCAGAACTGAAAAAGGGAGACATAACAACAGATCCTGAAGA  244

seq1  AATCCAAAACACCATCAGATCCTTCTACAAAAGGCTATACTCAACAAAAC  294
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCCAAAACACCATCAGATCCTTCTACAAAAGGCTATACTCAACAAAAC  294

seq1  TGGAAAACCTGGACGAAATGGACAAATTTCTGGACAGATACCAGGTACCA  344
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAAACCTGGACGAAATGGACAAATTTCTGGACAGATACCAGGTACCA  344

seq1  AAGTTGAATCAGGATCAAGTTGACCTTCTAAACAGTCCCATATCCCCTAA  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTGAATCAGGATCAAGTTGACCTTCTAAACAGTCCCATATCCCCTAA  394

seq1  AGAAATAGAAGCAGTTATAAATAGTCTCCCAGCCAAAAAAAGCCCAGGAC  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAATAGAAGCAGTTATAAATAGTCTCCCAGCCAAAAAAAGCCCAGGAC  444

seq1  CAGACGGGTTTAGTGCAGAGTTCTATCAGACCTTCAAAGAAGATCTAATT  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACGGGTTTAGTGCAGAGTTCTATCAGACCTTCAAAGAAGATCTAATT  494

seq1  CCAGTTCTGCACAAACTTTTTCACAAGATAGAAGTAGAAAGTACTCTACC  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTTCTGCACAAACTTTTTCACAAGATAGAAGTAGAAAGTACTCTACC  544

seq1  CAACTCA  551
      |||||||
seq2  CAACTCA  551