BAC Information

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BAC

Clone NameB6Ng01-152E13
Chromosome17 (Build37)
Map Location 60,209,948 - 60,210,707
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100043537, LOC100043542
Downstream geneLOC100043549
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-152E13.bB6Ng01-152E13.g
ACCDH947895DH947896
length1,169762
definitionDH947895|Mus musculus domesticus DNA, BAC clone: B6Ng01-152E13, 5' end.DH947896|Mus musculus domesticus DNA, BAC clone: B6Ng01-152E13, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaaccatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggtgtggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatccgtctggcggttcctca
gaatattggacatagtactaccagaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagttggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactgagctattaaaatgaatgaatttatgaaattcctatccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
ggaattcacacaatatatactcactgataagtggatattagcccaaaacc
taggatacacaagatatgatacaatttcctaaacacatgtaactcaacaa
aaatgaagactgaagtatggacactatgcccctccttagaagtgggaacc
aaacacccatgcaaggagttacagagacaaagtttggatctgagatgaaa
ggatggaccatgtagagactgccatatcctgggatccaccccatagtcag
catccaaacgctgacaccattgcatacactagcaagattttatcgaaagg
acccagatgtagctgtctcttgtgagactatgccggggcctagcaaacac
agaagtggatgcttacagtcagctaatggatggatcacagggctctcatg
gaggagctagagaaagtacccaaggagctaaagggtcttgcaaccctata
gtggaacaacattatgaactaaccagtacccgaactcttgacctctagct
gcctaatgtataaaagaatgtctaatcgccttcactggaagaaagccatg
gacagacacgctaacttttattgctcgtacggggactcctggcctaaatg
tgaattgtgttaggctgat
gaattcttctttcagaacccctaatggtatgttgagtactggtatatatt
cttaggatatatactgcagagccaaaccagaaagaaaacagaaaaatctc
atcacaggaggtagacagaaaactcattctcatctaaacagacaaaaatt
attctccctaagcaagtggaaggggaggcccttggtcatgtggaggcttt
atgccccaggatacggggatgctagagcaatgaggcaggagtggatgagt
aggtgaaggagcaccctcatagaggagaaggggatggggaaggcggatgg
ttttgggagctctgtgaagggttaactggaaagggggatatcatttgaaa
tgtacataaataaaatgattaataaaaaggaaaaaaaaaaaaccctagga
tttagcagccaaactttgtaatctcacaagcccaaggtagtctacctact
ccaaactcatcagctgaagacaagtggaaaaaccaactctacataggact
ggcagtggaaacatcagaggaaagtataaatcaaacagcacaaacaaggg
tcaagactacaaaaatggagcaaaaaggaaagcaggcagcaaggtgagcc
tgggcctgcatgataaagccaggcattgcacatggtattgtttggcaggt
aaagccatgcgttgcatatggtattgtgtgggaggatcttccttgtctaa
tttaatttaaatatagtaaagcaggggggtctgttatttggaacagggaa
aagggatgtggc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_60209948_60210707
seq2: B6Ng01-152E13.g_69_830

seq1  GAATTCTTCTTTCAGAACCCCTAATGGTATGTTGAGTACTGGTATATATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTCTTTCAGAACCCCTAATGGTATGTTGAGTACTGGTATATATT  50

seq1  CTTAGGATATATACTGCAGAGCCAAACCAGAAAGAAAACAGAAAAATCTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAGGATATATACTGCAGAGCCAAACCAGAAAGAAAACAGAAAAATCTC  100

seq1  ATCACAGGAGGTAGACAGAAAACTCATTCTCATCTAAACAGACAAAAATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCACAGGAGGTAGACAGAAAACTCATTCTCATCTAAACAGACAAAAATT  150

seq1  ATTCTCCCTAAGCAAGTGGAAGGGGAGGCCCTTGGTCATGTGGAGGCTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTCCCTAAGCAAGTGGAAGGGGAGGCCCTTGGTCATGTGGAGGCTTT  200

seq1  ATGCCCCAGGATACGGGGATGCTAGAGCAATGAGGCAGGAGTGGATGAGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCCCCAGGATACGGGGATGCTAGAGCAATGAGGCAGGAGTGGATGAGT  250

seq1  AGGTGAAGGAGCACCCTCATAGAGGAGAAGGGGATGGGGAAGGCGGATGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTGAAGGAGCACCCTCATAGAGGAGAAGGGGATGGGGAAGGCGGATGG  300

seq1  TTTTGGGAGCTCTGTGAAGGGTTAACTGGAAAGGGGGATATCATTTGAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGGGAGCTCTGTGAAGGGTTAACTGGAAAGGGGGATATCATTTGAAA  350

seq1  TGTACATAAATAAAATGATTAATAAAAAGGAAAAAAAAAAAACCCTAGGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTACATAAATAAAATGATTAATAAAAAGGAAAAAAAAAAAACCCTAGGA  400

seq1  TTTAGCAGCCAAACTTTGTAATCTCACAAGCCCAAGGTAGTCTACCTACT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGCAGCCAAACTTTGTAATCTCACAAGCCCAAGGTAGTCTACCTACT  450

seq1  CCAAACTCATCAGCTGAAGACAAGTGGAAAAACCAACTCTACATAGGACT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAACTCATCAGCTGAAGACAAGTGGAAAAACCAACTCTACATAGGACT  500

seq1  GGCAGTGGAAACATCAGAGGAAAGTATAAATCAAACAGCACAAACAAGGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGTGGAAACATCAGAGGAAAGTATAAATCAAACAGCACAAACAAGGG  550

seq1  TCAAGACTACAAAAATGGAGCAAAAAGGAAAGCAGGCAGCAAAGGTGAGC  600
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  TCAAGACTACAAAAATGGAGCAAAAAGGAAAGCAGGCAGC-AAGGTGAGC  599

seq1  CTGGGCCTGCATGATAAAGCCAGGCATTGCACATGGTATTGTTTGGCAGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGCCTGCATGATAAAGCCAGGCATTGCACATGGTATTGTTTGGCAGG  649

seq1  TAAAGCCATGCGTTGCATATGGTATTGTGTGGCAGGATCTTCCTTGTCTA  700
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  TAAAGCCATGCGTTGCATATGGTATTGTGTGGGAGGATCTTCCTTGTCTA  699

seq1  A-TTAATTTAAATATTAGTAAAGCA-GGGGGCCTGTAATT--GGACAGGG  746
      | |||||||||||| |||||||||| ||||| |||| |||  | ||||||
seq2  ATTTAATTTAAATA-TAGTAAAGCAGGGGGGTCTGTTATTTGGAACAGGG  748

seq1  AAAAGGGAGGTGGC  760
      |||||||| |||||
seq2  AAAAGGGATGTGGC  762