BAC Information

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BAC

Clone NameB6Ng01-153M12
Chromosome17 (Build37)
Map Location 66,620,182 - 66,794,128
singlet/doubletdoublet
Overlap gene1110012J17Rik, LOC100043876
Upstream geneE130009J12Rik, LOC668655, LOC674701, Vapa, Txndc2, Rab31, Ppp4r1, Ralbp1, LOC100043873, LOC100043592, Twsg1, Ankrd12, 5430411C19Rik, Ndufv2, ORF19, Ddx11, LOC100043599, LOC100043875
Downstream geneRab12, 9130404H23Rik, Ptprm
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-153M12.bB6Ng01-153M12.g
ACCDH948996DH948997
length975933
definitionDH948996|Mus musculus domesticus DNA, BAC clone: B6Ng01-153M12, 5' end.DH948997|Mus musculus domesticus DNA, BAC clone: B6Ng01-153M12, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(66,793,151 - 66,794,128)(66,620,182 - 66,621,117)
sequence
gaattcactctgtagaccaggctggtctcgaactcagaaatctgcctgcc
tctgcctcccaagtgctgggattaaaggcgtgcaccaccactgcccagct
aggggttgttttcttaaagagagatttgaggtttttgtttgtgggggaga
tgctgtggattgaagccttgtcctgtgtgtgctaactgaagacgcgggca
ctgagaacaccctcagcccctgaagcttggggagatttttagtttcagtc
tgacatggtttgttccatttggcaggctgggtgccaggtgctcagcacgg
cctgggtggtggtgtgggcaggacccagcatcttagcagctggagggtca
tctccttgctcctggttcccccttccttttctttgtggggggtatcagca
tggagggtcttggttcttcgctcccagcactctgctccccattaggcatt
cttcattcagtcccgaaaggaccaggatgcaaatcttaggcggcatgatg
ttgtggtccaagacagtagccactcagctgccagctggactgtcacttgg
taaacaatagtagcagtccctgggcctgcccagccacagctggtctctgc
acagaacatttccattgtcccaaaaggaaatgaggcgtgtttatccctat
atgacaaaagacagcagcagtttctgcctcagactcccagtcaccaaagg
actgctcgtgttcccactgcgtctgtttacacggaatcatcagatggaga
aagagttacggagctgaggttacagctacaaagacatggagggatttctt
tttgtcatttccacaagcatacgcagttcatctgagattaagagagatgg
agatttgcatatattgctagtatgatctgtccagagtttggttaatatat
caagaaatcctgcatttgcttttgcgagattaaggtgttgatttacccac
cttcctgacggcgcccataagcctt
gaattctttgctctgtgagttcatgctgggcactgcaggggctttggagc
ctctctgaccttctccactccatactcaaagtactacaatggctcacctg
ccatgcttaagacgggagagccaaaactgtcttcagatgttgctaataat
tgcccatgtggggcaaaatcgcccacccattgtttatttgagaatccatg
tcttaccatcatcagattggttgattttgcgtttacagtatgaataatgt
gttgttttgttatttttcccaaagcagaggggatgagcgaaccggctggg
aagaccacatttcagatgttctgaaaggcatgagtgcttcaagaaggaat
gaacatcactgaattaaaagatagaagccaggggctggagagatggctca
gcggttaagagcactgactgctcttccaaaggttctgagttcaaatccca
gcaaccacatggtggctcacaaccatccataatgagatctgacgccctct
tctggggtgtctgaaaacagctacggtgtacttacatctaacaaataaat
aaatcttaaaaagaaaaaatagaagccaagagatgtccttctggcaggtg
gtctgtggcttacaggcagctttggagtttcagtgccttgaggtgataag
gtctgactgggaagacattggtgtaaaaaaaagaggtggtgtttgcttgg
agcacccatgtttggcaccatgggtaatgtgccctaggtgtagtgtccct
tataggaggaccctctgggcaataatttattcatccactcattttcattc
attcattcattcattcattcatcatcactggccctctgccatgcaccagg
agctggctgttctatgtgaagaaaatgatgctgtaattccttctctatgg
tgactcattagtgggaggagaccaggttgtcac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_66793151_66794128
seq2: B6Ng01-153M12.b_43_1017 (reverse)

seq1  AAGGCTTATGGGTGCCGTGCATGAAGGTGAGTAAAATAACAACTTAATCT  50
      |||||||||||| ||||| || ||||||| |||||  |||| ||||||||
seq2  AAGGCTTATGGGCGCCGT-CAGGAAGGTGGGTAAATCAACACCTTAATCT  49

seq1  ACGAAAAGCAAATGCAGGATTTCTTGATATAATTAACCAAAACTCTGGAC  100
         ||||||||||||||||||||||||||| ||||||| |||||||||||
seq2  CGCAAAAGCAAATGCAGGATTTCTTGATAT-ATTAACC-AAACTCTGGAC  97

seq1  AGATCATACTAGCAATTATATGCAAATCTCCATCTCTCTTAATCTCAGAT  150
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  AGATCATACTAGCAA-TATATGCAAATCTCCATCTCTCTTAATCTCAGAT  146

seq1  GAACTGCGTATGCTTGTGGAAATGACAAAAAGAAATCCCTCCATGTCTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTGCGTATGCTTGTGGAAATGACAAAAAGAAATCCCTCCATGTCTTT  196

seq1  GTAGCTGTAACCTCAGCTCCGTAACTCTTTCTCCATCTGATGATTCCGTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGCTGTAACCTCAGCTCCGTAACTCTTTCTCCATCTGATGATTCCGTG  246

seq1  TAAACAGACGCAGTGGGAACACGAGCAGTCCTTTGGTGACTGGGAGTCTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACAGACGCAGTGGGAACACGAGCAGTCCTTTGGTGACTGGGAGTCTG  296

seq1  AGGCAGAAACTGCTGCTGTCTTTTGTCATATAGGGATAAACACGCCTCAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCAGAAACTGCTGCTGTCTTTTGTCATATAGGGATAAACACGCCTCAT  346

seq1  TTCC-TTTGGGACAATGGAAATGTTCTGTGCAGAGACCAGCTGTGGCTGG  399
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTTTTGGGACAATGGAAATGTTCTGTGCAGAGACCAGCTGTGGCTGG  396

seq1  GCAGGCCCAGGGACTGCTACTATTGTTTACCAAGTGACAGTCCAGCTGGC  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGCCCAGGGACTGCTACTATTGTTTACCAAGTGACAGTCCAGCTGGC  446

seq1  AGCTGAGTGGCTACTGTCTTGGACCACAACATCATGCCGCCTAAGATTTG  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGAGTGGCTACTGTCTTGGACCACAACATCATGCCGCCTAAGATTTG  496

seq1  CATCCTGGTCCTTTCGGGACTGAATGAAGAATGCCTAATGGGGAGCAGAG  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCTGGTCCTTTCGGGACTGAATGAAGAATGCCTAATGGGGAGCAGAG  546

seq1  TGCTGGGAGCGAAGAACCAAGACCCTCCATGCTGATACCCCCCACAAAGA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGGGAGCGAAGAACCAAGACCCTCCATGCTGATACCCCCCACAAAGA  596

seq1  AAAGGAAGGGGGAACCAGGAGCAAGGAGATGACCCTCCAGCTGCTAAGAT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGAAGGGGGAACCAGGAGCAAGGAGATGACCCTCCAGCTGCTAAGAT  646

seq1  GCTGGGTCCTGCCCACACCACCACCCAGGCCGTGCTGAGCACCTGGCACC  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGGTCCTGCCCACACCACCACCCAGGCCGTGCTGAGCACCTGGCACC  696

seq1  CAGCCTGCCAAATGGAACAAACCATGTCAGACTGAAACTAAAAATCTCCC  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCTGCCAAATGGAACAAACCATGTCAGACTGAAACTAAAAATCTCCC  746

seq1  CAAGCTTCAGGGGCTGAGGGTGTTCTCAGTGCCCGCGTCTTCAGTTAGCA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGCTTCAGGGGCTGAGGGTGTTCTCAGTGCCCGCGTCTTCAGTTAGCA  796

seq1  CACACAGGACAAGGCTTCAATCCACAGCATCTCCCCCACAAACAAAAACC  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACAGGACAAGGCTTCAATCCACAGCATCTCCCCCACAAACAAAAACC  846

seq1  TCAAATCTCTCTTTAAGAAAACAACCCCTAGCTGGGCAGTGGTGGTGCAC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAATCTCTCTTTAAGAAAACAACCCCTAGCTGGGCAGTGGTGGTGCAC  896

seq1  GCCTTTAATCCCAGCACTTGGGAGGCAGAGGCAGGCAGATTTCTGAGTTC  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTTTAATCCCAGCACTTGGGAGGCAGAGGCAGGCAGATTTCTGAGTTC  946

seq1  GAGACCAGCCTGGTCTACAGAGTGAATTC  978
      |||||||||||||||||||||||||||||
seq2  GAGACCAGCCTGGTCTACAGAGTGAATTC  975

seq1: chr17_66620182_66621117
seq2: B6Ng01-153M12.g_71_1003

seq1  GAATTCTTTGCTCTGTGAGTTCATGCTGGGCACTGCAGGGGCTTTGGAGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTGCTCTGTGAGTTCATGCTGGGCACTGCAGGGGCTTTGGAGC  50

seq1  CTCTCTGACCTTCTCCACTCCATACTCAAAGTACTACAATGGCTCACCTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCTGACCTTCTCCACTCCATACTCAAAGTACTACAATGGCTCACCTG  100

seq1  CCATGCTTAAGACGGGAGAGCCAAAACTGTCTTCAGATGTTGCTAATAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGCTTAAGACGGGAGAGCCAAAACTGTCTTCAGATGTTGCTAATAAT  150

seq1  TGCCCATGTGGGGCAAAATCGCCCACCCATTGTTTATTTGAGAATCCATG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCCATGTGGGGCAAAATCGCCCACCCATTGTTTATTTGAGAATCCATG  200

seq1  TCTTACCATCATCAGATTGGTTGATTTTGCGTTTACAGTATGAATAATGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTACCATCATCAGATTGGTTGATTTTGCGTTTACAGTATGAATAATGT  250

seq1  GTTGTTTTGTTATTTTTCCCAAAGCAGAGGGGATGAGCGAACCGGCTGGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGTTTTGTTATTTTTCCCAAAGCAGAGGGGATGAGCGAACCGGCTGGG  300

seq1  AAGACCACATTTCAGATGTTCTGAAAGGCATGAGTGCTTCAAGAAGGAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACCACATTTCAGATGTTCTGAAAGGCATGAGTGCTTCAAGAAGGAAT  350

seq1  GAACATCACTGAATTAAAAGATAGAAGCCAGGGGCTGGAGAGATGGCTCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACATCACTGAATTAAAAGATAGAAGCCAGGGGCTGGAGAGATGGCTCA  400

seq1  GCGGTTAAGAGCACTGACTGCTCTTCCAAAGGTTCTGAGTTCAAATCCCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGGTTAAGAGCACTGACTGCTCTTCCAAAGGTTCTGAGTTCAAATCCCA  450

seq1  GCAACCACATGGTGGCTCACAACCATCCATAATGAGATCTGACGCCCTCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAACCACATGGTGGCTCACAACCATCCATAATGAGATCTGACGCCCTCT  500

seq1  TCTGGGGTGTCTGAAAACAGCTACGGTGTACTTACATCTAACAAATAAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGGGTGTCTGAAAACAGCTACGGTGTACTTACATCTAACAAATAAAT  550

seq1  AAATCTTAAAAAGAAAAAATAGAAGCCAAGAGATGTCCTTCTGGCAGGTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCTTAAAAAGAAAAAATAGAAGCCAAGAGATGTCCTTCTGGCAGGTG  600

seq1  GTCTGTGGCTTACAGGCAGCTTTGGAGTTTCAGTGCCTTGAGGTGATAAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGTGGCTTACAGGCAGCTTTGGAGTTTCAGTGCCTTGAGGTGATAAG  650

seq1  GTCTGACTGGGAAGACATTGGTGTAAAAAAAAGAGGTGGTGTTTGCTTGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGACTGGGAAGACATTGGTGTAAAAAAAAGAGGTGGTGTTTGCTTGG  700

seq1  AGCACCCATGTTTGGCACCATGGGTAATGTGCCCTAGGTGTAGTGTCCCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACCCATGTTTGGCACCATGGGTAATGTGCCCTAGGTGTAGTGTCCCT  750

seq1  TATAGGAGGACCCTCTGGGCAATAATTTTATTCATCCACTCATTTTCATT  800
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  TATAGGAGGACCCTCTGGGCAATAA-TTTATTCATCCACTCATTTTCATT  799

seq1  CATTCATTCATTCATTCATTCATTCATTCACTGGCCCTCTGCCATGCACC  850
      |||||||||||||||||||||| ||| |||||||||||||||||||||||
seq2  CATTCATTCATTCATTCATTCA-TCA-TCACTGGCCCTCTGCCATGCACC  847

seq1  AGGAGCTGGCTGTTCTGGGTGAAGAAAAGGATGCTGTAATTCCTTCTCTA  900
      ||||||||||||||||  |||||||||| |||||||||||||||||||||
seq2  AGGAGCTGGCTGTTCTATGTGAAGAAAATGATGCTGTAATTCCTTCTCTA  897

seq1  -GGGGACTCACTAGTGGGAAGGAGACAAGGTTGTCAC  936
       || |||||| ||||||| ||||||| ||||||||||
seq2  TGGTGACTCATTAGTGGG-AGGAGACCAGGTTGTCAC  933