BAC Information

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BAC

Clone NameB6Ng01-154D17
Chromosome17 (Build37)
Map Location 44,090,383 - 44,228,346
singlet/doubletdoublet
Overlap geneDscr1l1, Enpp5
Upstream geneTnfrsf21, LOC100043770, Gpr110, Gpr116, Mep1a, LOC100043332, Pla2g7, Tdrd6, Slc25a27, Cyp39a1
Downstream geneEnpp4, Clic5, Runx2, Supt3h, 4930564C03Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-154D17.bB6Ng01-154D17.g
ACCDH949334DH949335
length1,187979
definitionDH949334|Mus musculus domesticus DNA, BAC clone: B6Ng01-154D17, 5' end.DH949335|Mus musculus domesticus DNA, BAC clone: B6Ng01-154D17, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(44,227,680 - 44,228,346)(44,090,383 - 44,091,363)
sequence
gaattcacatcttgaagcccattccccgccccccccatatgatttttttt
ccaagttagggctttgaaattttctagtgaggagagaaggagctccaaaa
cagagtcagtgtcctttagaggaggagagaggacagtgtcttcccctctc
cagccccttctgccctaggctgcggggagttggccatctacaggccagga
ggagaactcaggagaaagatccctgggactttccacccccagagttaagg
cacagtactctcagggcagctggagctggctgtagtgtgatttactttca
acacaagggtcaccttgcattgtctcttaacagtcaccttccaattccaa
gatgacatcatttcaagaatgtcatgtgaataactccagagtgctagatt
ttgtaatcagcatcatcattcaccaagatttagccatatcatcataaatc
tcaataaatctctttgctgctacatttccatgctattctctatgcttaaa
gccctgtttgtttatccaacagtttgaagaatggtcagtttcagagtttg
gctattaatacaaagccagtatgaacattgtgtatagcttggcttttctg
aagatgtttttctttggaataaatatcacagaaaggcaaataccaaggca
tgtttggctttctaaaaaaactgtttgccagagtgcattttctgcttata
gttccaggaacaaatgggtgatctatgtgtccccatagcttttgagggaa
agctatttttaaaaatcttagcaagtctgatagatactgttacttttctg
tggtttcactttgcagtccccagggcccactgatgcaaagcagtttcaca
accattcttgctcgatttggtctttggtgaaaagtctccatgatttgctt
gccttgaaatggaatgttctaggcctttgttggatgtgtggtttgaagat
atgttcttcccagtcagtggctggttctctgggctctcacacggactttc
acagacacaaatagtcactcagtaagtgtcaagttcccagtcatagtcta
cctcccacctctggtgggcatttggtggtggtctgtcagtctgctggtct
ctgtcgtctagatggaactcatacacataagttcttgcatactagggagt
gccattacagctgagaccacggccgtagtctccagtt
gaattctgaagaggggaatgccagcccctagcatggactgtgatgtttcc
actctggtcgcctgtgtggtggatgtggaggtctttaccaatcaggaggt
taaggtaggcagctacagtgttcctttttattgttgcggtgctgggggct
acttggcggagctttttctaggataggggaaatatgacttgggttaacca
ttggcagttttactgtttgtaccacgaaggcaagtggaagtgcatggtgg
tgctagctggaataagttagaagagacgagcgtgctgtgttagaatgtga
ttggatatcgcacggcggtctattctcatctcctgtattaagagatctgt
ggtcacctctttcccagaagacatgtcttcctattctctttacagtatct
ccatcaagccgggtaatctgtaggtcctgagtactaaggaggggtgtcaa
tcattggtgaatgggagaatatgcacgcagtcaccaggatattgaggatg
tcctgacaataggacaatacccattcacgacatgccacctacatactccg
gaatgtggtcctcagactgaacaaaagctgttctgctgcagtgtcagtct
ctggggcggagaaatctgaagtccggagagcaagcagcgtttaaagttgc
ttttgtcaggtgcaaaagcagagagctggttcctcgcaccactttcctcg
ttccggaggaaagttcatgcagaaatccgtttttcaatcctgaaacttgg
agtcacacacactaactagccctggctgagcagcagtcctgtctgttgtg
ggcaacagttctctcatcaccatgattctcttggggattttttttccaat
ttggttttatattatgaaaaggattccatgcttgtaaaaaaaattctttt
ccttctcagttctgaaaaaggactagccaagcttctatttataaacataa
gggtaaaggggatgtagagggagggaggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_44227680_44228346
seq2: B6Ng01-154D17.b_575_1235 (reverse)

seq1  AACTGGGGACTACGGGCGTGG-CTCAGCTGTAATGTGCA-TCCCTAGTAT  48
      |||||| |||||||| ||||| ||||||||||||| ||| ||||||||||
seq2  AACTGGAGACTACGGCCGTGGTCTCAGCTGTAATG-GCACTCCCTAGTAT  49

seq1  GCAAGAAACTATGTGTATAGAG-TCCA-CTAGACGGACAGAGACAGACAG  96
      |||||||  ||||||||| ||| |||| |||||| |||||||||   |||
seq2  GCAAGAACTTATGTGTAT-GAGTTCCATCTAGAC-GACAGAGACCAGCAG  97

seq1  ACTGACAGA-CACACACAAATGCACA-CAGAGGTTGGGAGGTAAGACTAT  144
      ||||||||| |||   ||||||| || |||||| |||||||| |||||||
seq2  ACTGACAGACCACCACCAAATGCCCACCAGAGG-TGGGAGGT-AGACTAT  145

seq1  GAACTGGGAACTTGACACTTACTGAAGTGAACTATTTTGTTGTTCTGTGA  194
      | |||||||||||||||||||||| |||| |||| |||||   |||||||
seq2  G-ACTGGGAACTTGACACTTACTG-AGTG-ACTA-TTTGT--GTCTGTGA  189

seq1  AAGTCCGTGTGGAGAGGCCAGAGAACCAGCCACTGACTGGGAAGAACATA  244
      |||||||||| ||||| |||||||||||||||||||||||||||||||||
seq2  AAGTCCGTGT-GAGAGCCCAGAGAACCAGCCACTGACTGGGAAGAACATA  238

seq1  TCTTCAAACCACACATCCAACAAAGGCCTAGAACATTCCATTTCAAGGCA  294
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCAAACCACACATCCAACAAAGGCCTAGAACATTCCATTTCAAGGCA  288

seq1  AGCAAATCATGGAGACTTTTCACCAAAGACCAAATCGAGCAAGAATGGTT  344
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAAATCATGGAGACTTTTCACCAAAGACCAAATCGAGCAAGAATGGTT  338

seq1  GTGAAACTGCTTTGCATCAGTGGGCCCTGGGGACTGCAAAGTGAAACCAC  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAAACTGCTTTGCATCAGTGGGCCCTGGGGACTGCAAAGTGAAACCAC  388

seq1  AGAAAAGTAACAGTATCTATCAGACTTGCTAAGATTTTTAAAAATAGCTT  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAAGTAACAGTATCTATCAGACTTGCTAAGATTTTTAAAAATAGCTT  438

seq1  TCCCTCAAAAGCTATGGGGACACATAGATCACCCATTTGTTCCTGGAACT  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTCAAAAGCTATGGGGACACATAGATCACCCATTTGTTCCTGGAACT  488

seq1  ATAAGCAGAAAATGCACTCTGGCAAACAGTTTTTTTAGAAAGCCAAACAT  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGCAGAAAATGCACTCTGGCAAACAGTTTTTTTAGAAAGCCAAACAT  538

seq1  GCCTTGGTATTTGCCTTTCTGTGATATTTATTCCAAAGAAAAACATCTTC  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTTGGTATTTGCCTTTCTGTGATATTTATTCCAAAGAAAAACATCTTC  588

seq1  AGAAAAGCCAAGCTATACACAATGTTCATACTGGCTTTGTATTAATAGCC  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAAGCCAAGCTATACACAATGTTCATACTGGCTTTGTATTAATAGCC  638

seq1  AAACTCTGAAACTGACCATTCTT  667
      |||||||||||||||||||||||
seq2  AAACTCTGAAACTGACCATTCTT  661

seq1: chr17_44090383_44091363
seq2: B6Ng01-154D17.g_66_1044

seq1  GAATTCTGAAGAGGGGAATGCCAGCCCCTAGCATGGACTGTGATGTTTCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGAAGAGGGGAATGCCAGCCCCTAGCATGGACTGTGATGTTTCC  50

seq1  ACTCTGGTCGCCTGTGTGGTGGATGTGGAGGTCTTTACCAATCAGGAGGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTGGTCGCCTGTGTGGTGGATGTGGAGGTCTTTACCAATCAGGAGGT  100

seq1  TAAGGTAGGCAGCTACAGTGTTCCTTTTTATTGTTGCGGTGCTGGGGGCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGGTAGGCAGCTACAGTGTTCCTTTTTATTGTTGCGGTGCTGGGGGCT  150

seq1  ACTTGGCGGAGCTTTTTCTAGGATAGGGGAAATATGACTTGGGTTAACCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGGCGGAGCTTTTTCTAGGATAGGGGAAATATGACTTGGGTTAACCA  200

seq1  TTGGCAGTTTTACTGTTTGTACCACGAAGGCAAGTGGAAGTGCATGGTGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGCAGTTTTACTGTTTGTACCACGAAGGCAAGTGGAAGTGCATGGTGG  250

seq1  TGCTAGCTGGAATAAGTTAGAAGAGACGAGCGTGCTGTGTTAGAATGTGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTAGCTGGAATAAGTTAGAAGAGACGAGCGTGCTGTGTTAGAATGTGA  300

seq1  TTGGATATCGCACGGCGGTCTATTCTCATCTCCTGTATTAAGAGATCTGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGATATCGCACGGCGGTCTATTCTCATCTCCTGTATTAAGAGATCTGT  350

seq1  GGTCACCTCTTTCCCAGAAGACATGTCTTCCTATTCTCTTTACAGTATCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCACCTCTTTCCCAGAAGACATGTCTTCCTATTCTCTTTACAGTATCT  400

seq1  CCATCAAGCCGGGTAATCTGTAGGTCCTGAGTACTAAGGAGGGGTGTCAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCAAGCCGGGTAATCTGTAGGTCCTGAGTACTAAGGAGGGGTGTCAA  450

seq1  TCATTGGTGAATGGGAGAATATGCACGCAGTCACCAGGATATTGAGGATG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTGGTGAATGGGAGAATATGCACGCAGTCACCAGGATATTGAGGATG  500

seq1  TCCTGACAATAGGACAATACCCATTCACGACATGCCACCTACATACTCCG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGACAATAGGACAATACCCATTCACGACATGCCACCTACATACTCCG  550

seq1  GAATGTGGTCCTCAGACTGAACAAAAGCTGTTCTGCTGCAGTGTCAGTCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGTGGTCCTCAGACTGAACAAAAGCTGTTCTGCTGCAGTGTCAGTCT  600

seq1  CTGGGGCGGAGAAATCTGAAGTCCGGAGAGCAAGCAGCGTTTAAAGTTGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGGCGGAGAAATCTGAAGTCCGGAGAGCAAGCAGCGTTTAAAGTTGC  650

seq1  TTTTGTCAGGTGCAAAAGCAGAGAGCTGGTTCCTCGCACCACTTTCCTCG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGTCAGGTGCAAAAGCAGAGAGCTGGTTCCTCGCACCACTTTCCTCG  700

seq1  TTCCGGAGGAAAGTTCATGCAGAAATCCGTTTTTCAATCCTGAAACTTGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCGGAGGAAAGTTCATGCAGAAATCCGTTTTTCAATCCTGAAACTTGG  750

seq1  AGTCACACACACTAACTAGCCCTGGCTGAGCAGCAGTCCTGTCTGTTGTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCACACACACTAACTAGCCCTGGCTGAGCAGCAGTCCTGTCTGTTGTG  800

seq1  GGCAACAGTTCTCTCATCACCATGATTCTCTTGGGGATTTTTTTTCCAAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAACAGTTCTCTCATCACCATGATTCTCTTGGGGATTTTTTTTCCAAT  850

seq1  TTGGTTTTATATTATGAAAAGGATTCCATGCTTGTAAAAAAAAATC-TTT  899
      ||||||||||||||||||||||||||||||||||||||||||| || |||
seq2  TTGGTTTTATATTATGAAAAGGATTCCATGCTTGTAAAAAAAATTCTTTT  900

seq1  CCTTCTCAGGTTCTGAAAAAAGGACTAGCCAAGCTTCTTATTTATAAACA  949
      |||||||| |||||| ||||||||||||||||||||| ||||||||||||
seq2  CCTTCTCA-GTTCTG-AAAAAGGACTAGCCAAGCTTC-TATTTATAAACA  947

seq1  TAAGGGTAAAGGGGATGTAGAGGGAGGGAGGG  981
      ||||||||||||||||||||||||||||||||
seq2  TAAGGGTAAAGGGGATGTAGAGGGAGGGAGGG  979