BAC Information

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BAC

Clone NameB6Ng01-156H16
Chromosome17 (Build37)
Map Location 60,297,986 - 60,299,102
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100043537, LOC100043542
Downstream geneLOC100043549
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-156H16.bB6Ng01-156H16.g
ACCDH950974DH950975
length1,1011,162
definitionDH950974|Mus musculus domesticus DNA, BAC clone: B6Ng01-156H16, 5' end.DH950975|Mus musculus domesticus DNA, BAC clone: B6Ng01-156H16, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctctgtctctatctctgtctgtctatctgtctcactccctctctc
tctcccttcctccctctctccctctctccctcccttcctccttctcttcc
tccatgcctccctccttccccccatttgtttgtctctctttctgtaagtt
caaataataaaatgtatacattaataatacacttgcccacgatgctgact
acaaaaaatattgtaattgcaccaatgatgtagaatatatatctttctcc
actattgaattttagactcagttattttacacacacacacacacacacac
acacacacacacacacacacaaacaaacaatatacatatgtagatgtgtg
tacatacacatgcacagacacatatgtgcacacacacgtgcacacatgct
ttactatggtaaatgatagtgtgtcagatccaagttgaaacatagctgtg
ctgagatttctctttgatgataaaacatgaactatgcagtacagtaaaaa
ggtgtttacaagctatcctccatgaagggaatgttgatgcctatctgtaa
tcacagcatagcagaggtgaagtatgagagctgtgaattcaagcctatgc
tgtactagattacaaacttcaacagagcctgtgtagtgagaccttatttc
taaagcagcaaagaacaatatttaccgtttacaatagactacactcagct
ttcataagctaataaaaagtgaaagagaaagaagataaagaaaaattaaa
aaaaaaacatacaggaacagaagtaatgaggatttaccagacactggcta
gttttgtgtcaacttgacacaagctggagttatcacagagaaagcggctc
ccttgaagaaatgcttccatgagatccagctgtaaggcattttctcaatt
agtgatcaaaggtgggatgtccctttgtgggtggtgccatccctagggtg
gtagtcctggttctataagaaagtatgctggctagccagggaagcaagcc
agtaagtatattcctcacgccttctgcatcacttctgcttctgactgcta
gctgataaccctttcttccaacttgctcctgtcatgatgtttgtgcaaga
a
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaaccatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggtgtggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatccgtctggcggttcctca
gaatattggacatagtactaccagaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagttggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactgagctattaaaatgaatgaatttatgaaattcctatccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
ggaattcacacaatatatactcactgataagtggatattagcccaaaacc
taggatacacaagatatgatacaatttcctaaacacatgtaactcaacaa
aaatgaagactgaagtatggacactatgcccctccttagaagtgggaacc
aaacacccatgcaaggagttacagagacaaagtttggatctgagatgaaa
ggatggaccatgtagagactgccatatcctgggatccaccccatagtcag
catccaaacgctgacaccattgcatacactagcaagattttatcgaaagg
acccagatgtagctgtctcttgtgagactatgccggggcctagcaaacac
agaagtggatgcttacagtcagctaatggatggatcacagggctcccatg
gaggagctagagaagtacccaggagctaaagggatctgcaaccttatagg
tggacaacattatgaactacagtaccccggagctcttgactctagctgca
atgtatcaaggatggctagtcgcatcacatgaagaaggccatggacggac
acgcaacttaattgccccatacagggatcgccagggcaaaacaggtactg
gtgtgataggtt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_60297986_60299102
seq2: B6Ng01-156H16.b_43_1143

seq1  GAATTCTCTGTCTCTATCTCTGTCTGTCTATCTGTCTCACTCCCTCTCTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTGTCTCTATCTCTGTCTGTCTATCTGTCTCACTCCCTCTCTC  50

seq1  TCTCCCTTCCTCCCTCTCTCCCTCTCTCCCTCCCTTCCTCCTTCTCTTCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCCTTCCTCCCTCTCTCCCTCTCTCCCTCCCTTCCTCCTTCTCTTCC  100

seq1  TCCATGCCTCCCTCCTTCCCCCCATTTGTTTGTCTCTCTTTCTGTAAGTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATGCCTCCCTCCTTCCCCCCATTTGTTTGTCTCTCTTTCTGTAAGTT  150

seq1  CAAATAATAAAATGTATACATTAATAATACACTTGCCCACGATGCTGACT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATAATAAAATGTATACATTAATAATACACTTGCCCACGATGCTGACT  200

seq1  ACAAAAAATATTGTAATTGCACCAATGATGTAGAATATATATCTTTCTCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAAAATATTGTAATTGCACCAATGATGTAGAATATATATCTTTCTCC  250

seq1  ACTATTGAATTTTAGACTCAGTTATTTTACACACACACACACACACACAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTATTGAATTTTAGACTCAGTTATTTTACACACACACACACACACACAC  300

seq1  ACACACACACACACACACACAAACAAACAATATACATATGTAGATGTGTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACACACACACACACACAAACAAACAATATACATATGTAGATGTGTG  350

seq1  TACATACACATGCACAGACACATATGTGCACACACACGTGCACACATGCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATACACATGCACAGACACATATGTGCACACACACGTGCACACATGCT  400

seq1  TTACTATGGTAAATGATAGTGTGTCAGATCCAAGTTGAAACATAGCTGTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTATGGTAAATGATAGTGTGTCAGATCCAAGTTGAAACATAGCTGTG  450

seq1  CTGAGATTTCTCTTTGATGATAAAACATGAACTATGCAGTACAGTAAAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGATTTCTCTTTGATGATAAAACATGAACTATGCAGTACAGTAAAAA  500

seq1  GGTGTTTACAAGCTATCCTCCATGAAGGGAATGTTGATGCCTATCTGTAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGTTTACAAGCTATCCTCCATGAAGGGAATGTTGATGCCTATCTGTAA  550

seq1  TCACAGCATAGCAGAGGTGAAGTATGAGAGCTGTGAATTCAAGCCTATGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACAGCATAGCAGAGGTGAAGTATGAGAGCTGTGAATTCAAGCCTATGC  600

seq1  TGTACTAGATTACAAACTTCAACAGAGCCTGTGTAGTGAGACCTTATTTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTACTAGATTACAAACTTCAACAGAGCCTGTGTAGTGAGACCTTATTTC  650

seq1  TAAAGCAGCAAAGAACAATATTTACCGTTTACAATAGACTACACTCAGCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGCAGCAAAGAACAATATTTACCGTTTACAATAGACTACACTCAGCT  700

seq1  TTCATAAGCTAATAAAAAGTGAAAGAGAAAGAAGATAAAGAAAAATTAAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATAAGCTAATAAAAAGTGAAAGAGAAAGAAGATAAAGAAAAATTAAA  750

seq1  AAAAAAACATACAGGAACAGAAGTAATGAGGATTTACCAGACACTGGCTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAACATACAGGAACAGAAGTAATGAGGATTTACCAGACACTGGCTA  800

seq1  GTTTTGTGTCAACTTGACACAAGCTGGAGTTATCACAGAGAAAGCAGGCT  850
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  GTTTTGTGTCAACTTGACACAAGCTGGAGTTATCACAGAGAAAGC-GGCT  849

seq1  CCCTTGAAGAAATGCTTCCATGAGATCCAGCTGTAAGGCATTTTCTCAAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTGAAGAAATGCTTCCATGAGATCCAGCTGTAAGGCATTTTCTCAAT  899

seq1  TAGTGATCAAGGGTGGGATGTCCCTTTGTGGGTGGTGCCATCCCTAGGGT  950
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  TAGTGATCAAAGGTGGGATGTCCCTTTGTGGGTGGTGCCATCCCTAGGGT  949

seq1  GGTAGTCCTGGGTTCTATAAGAAAGTAGGCTGAGCTAGCCAGGGGAAGCA  1000
      ||||||||| ||||||||||||||||| |||| |||||||| ||||||||
seq2  GGTAGTCCT-GGTTCTATAAGAAAGTATGCTG-GCTAGCCA-GGGAAGCA  996

seq1  AGCCAGTAAGTTATATTCCTCCACGGCCTCTGCATCAACTCCTGCTTCCT  1050
      |||||||||| ||||||||| |||| | |||||||| ||| |||||| ||
seq2  AGCCAGTAAG-TATATTCCT-CACGCCTTCTGCATC-ACTTCTGCTT-CT  1042

seq1  GACCTGCTAGCTGAATAAACCCTTTCCTTCCCAACTTGCTTCTTGGTCAT  1100
      || |||||||||||   |||||||||  | |||||||||| ||  |||||
seq2  GA-CTGCTAGCTGA--TAACCCTTTC--TTCCAACTTGCTCCT--GTCAT  1085

seq1  GATGTTTTGTGCAAGAA  1117
      |||| ||||||||||||
seq2  GATG-TTTGTGCAAGAA  1101