BAC Information

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BAC

Clone NameB6Ng01-157K21
Chromosome17 (Build37)
Map Location 68,066,350 - 68,218,838
singlet/doubletdoublet
Overlap geneLama1, Arhgap28
Upstream genePtprm, Lrrc30
Downstream geneD930040M24Rik, EG622645
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-157K21.bB6Ng01-157K21.g
ACCDH951847DH951848
length1,024503
definitionDH951847|Mus musculus domesticus DNA, BAC clone: B6Ng01-157K21, 5' end.DH951848|Mus musculus domesticus DNA, BAC clone: B6Ng01-157K21, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(68,217,795 - 68,218,838)(68,066,350 - 68,066,858)
sequence
gaattcttttaagttcttaggtcctttgtaaccaatgagggtagatttag
atgacattacgttcatgcagggtagtgtggctgtagacacatggtgtgat
tgagcattggttggtcaacataagagaaatgattatcatatttgaaagat
acaatttggaaacatagcacagtagataagacaacatacccaacagagtc
catgggtaggagttgatgttgggaagttacagcatagatgatctaaatgg
agaatttactcgctggcaaatcaaaggcagtattgacttttttgggccag
ttattagtatttcagaaatcatccgtgtatcaggttcatagattatttag
aattatttcttcttcttcttcttcttcttcttcttcttattattattatt
actattattattagaatgtttgtcatcctacagaggtatttaatttatgt
aatttattgtcaatttctagttttttcagaaagtcgaggaatcaggtctg
gaatcggaaggaatttttcgactctcgggatgtactgccaaagtcaaggt
actcagtgatatctctcttcccagataaagacgtgagctagccttggtca
gcgttcagtcgctcaggacccgagaaacacttataaaataaagtatttgg
ttggggggcttgcttacagtttcagagagtgagtccattgtcatcgtggc
gcgggggctggggtgggaacatggcaagagcatgggagcgtggtggcact
caggatgctgcagcagttgctaagagcttcatcatgatcagaaggcagag
agaagaaaaaatgggcctagcatgggctttagaaaactcaaagccacccc
ccaccatgacgcacttcctctaccaagaccacagctacttcccgaggcac
actcctaacctttctctatagtgccacttcctaatgactaaagcggtcaa
tatatgagctatggggacatctaagcccatgacccgttcagtgagctcga
aatctctctttgacgccgttgtcc
atacttttggaagcaactgaagactttggctgaaaaatcttccaacacag
ctcaccacggctgatcttcctctgcactgggtgggtttggcagtgtaaga
atgaaaatccaaagttgagagctacctttttgttttcttttaacagagcg
ccatccgatatcacacgcaatcgatggcaccaacaactggtggcagagcc
ccagtattcagaatgggagagagtatcactgggtcactgtcaccctggac
ttacggcaggtaggttgggccaggcccgctggagatggtccaaagcactc
tgatgtatgccttgttttggtttgtttgttgtttgtttgtttgtttgttt
ttgaacacatttgtccaggtgttgggtaggtgatacatagtattatgtgg
tagcacttcttcacctatacggtcctggtccaagcctagagtatgagggt
atatctggtcgggcctatggtatgtgtgtgtatgggactatgggtagggg
agg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_68217795_68218838
seq2: B6Ng01-157K21.b_50_1073 (reverse)

seq1  GGACAACGGCGGTCACAGAGACGAGATTTCTGATGCTCACTGGAACTGGG  50
      |||||||||| |||| |||   |||||||| || ||||||| |||| |||
seq2  GGACAACGGC-GTCAAAGA---GAGATTTC-GA-GCTCACT-GAAC-GGG  42

seq1  TCATGGTGGCTTAAGAATGTCCCCCATAGGCTCATATATTTGACCGCTTT  100
      |||||  ||||||   |||| ||||||| ||||||||| |||||||||||
seq2  TCATG--GGCTTA--GATGT-CCCCATA-GCTCATATA-TTGACCGCTTT  85

seq1  AGTCATTAGGAAGTGGCACTATTAGAGAAAGGTTAGGAGGTGTGGCCTCG  150
      ||||||||||||||||||||| |||||||||||||||| |||| ||||||
seq2  AGTCATTAGGAAGTGGCACTA-TAGAGAAAGGTTAGGA-GTGT-GCCTCG  132

seq1  GGAAGTAGCTGTGGTCTTGGTAGAGGAAGTGCGTCATGGTGGGGGGTTGG  200
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  GGAAGTAGCTGTGGTCTTGGTAGAGGAAGTGCGTCATGGTGGGGGG-TGG  181

seq1  CTTTGAGTTTTCTAAAGCCCATGCTAGGCCCATTTTTTTCTTCTCTCTGC  250
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  CTTTGAGTTTTCTAAAGCCCATGCTAGGCCCA-TTTTTTCTTCTCTCTGC  230

seq1  CTTCTGATCATGATGAAGCTCTTAGCAACTGCTGCAGCATCCTGAGTGCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTGATCATGATGAAGCTCTTAGCAACTGCTGCAGCATCCTGAGTGCC  280

seq1  ACCACGCTCCCATGCTCTTGCCATGTTCCCACCCCAGCCCCCGCGCCACG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCACGCTCCCATGCTCTTGCCATGTTCCCACCCCAGCCCCCGCGCCACG  330

seq1  ATGACAATGGACTCACTCTCTGAAACTGTAAGCAAGCCCCCCAACCAAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGACAATGGACTCACTCTCTGAAACTGTAAGCAAGCCCCCCAACCAAAT  380

seq1  ACTTTATTTTATAAGTGTTTCTCGGGTCCTGAGCGACTGAACGCTGACCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTATTTTATAAGTGTTTCTCGGGTCCTGAGCGACTGAACGCTGACCA  430

seq1  AGGCTAGCTCACGTCTTTATCTGGGAAGAGAGATATCACTGAGTACCTTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTAGCTCACGTCTTTATCTGGGAAGAGAGATATCACTGAGTACCTTG  480

seq1  ACTTTGGCAGTACATCCCGAGAGTCGAAAAATTCCTTCCGATTCCAGACC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTGGCAGTACATCCCGAGAGTCGAAAAATTCCTTCCGATTCCAGACC  530

seq1  TGATTCCTCGACTTTCTGAAAAAACTAGAAATTGACAATAAATTACATAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTCCTCGACTTTCTGAAAAAACTAGAAATTGACAATAAATTACATAA  580

seq1  ATTAAATACCTCTGTAGGATGACAAACATTCTAATAATAATAGTAATAAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAATACCTCTGTAGGATGACAAACATTCTAATAATAATAGTAATAAT  630

seq1  AATAATAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAATAATTCTAAAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAATAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAATAATTCTAAAT  680

seq1  AATCTATGAACCTGATACACGGATGATTTCTGAAATACTAATAACTGGCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTATGAACCTGATACACGGATGATTTCTGAAATACTAATAACTGGCC  730

seq1  CAAAAAAGTCAATACTGCCTTTGATTTGCCAGCGAGTAAATTCTCCATTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAAAGTCAATACTGCCTTTGATTTGCCAGCGAGTAAATTCTCCATTT  780

seq1  AGATCATCTATGCTGTAACTTCCCAACATCAACTCCTACCCATGGACTCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATCATCTATGCTGTAACTTCCCAACATCAACTCCTACCCATGGACTCT  830

seq1  GTTGGGTATGTTGTCTTATCTACTGTGCTATGTTTCCAAATTGTATCTTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGGGTATGTTGTCTTATCTACTGTGCTATGTTTCCAAATTGTATCTTT  880

seq1  CAAATATGATAATCATTTCTCTTATGTTGACCAACCAATGCTCAATCACA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATATGATAATCATTTCTCTTATGTTGACCAACCAATGCTCAATCACA  930

seq1  CCATGTGTCTACAGCCACACTACCCTGCATGAACGTAATGTCATCTAAAT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGTGTCTACAGCCACACTACCCTGCATGAACGTAATGTCATCTAAAT  980

seq1  CTACCCTCATTGGTTACAAAGGACCTAAGAACTTAAAAGAATTC  1044
      ||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACCCTCATTGGTTACAAAGGACCTAAGAACTTAAAAGAATTC  1024

seq1: chr17_68066350_68066858
seq2: B6Ng01-157K21.g_69_577

seq1  GAATTCATACTTTTGGAAGCAACTGAAGACTTTGGCTGAAAAATCTTCCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATACTTTTGGAAGCAACTGAAGACTTTGGCTGAAAAATCTTCCA  50

seq1  ACACAGCTCACCACGGCTGATCTTCCTCTGCACTGGGTGGGTTTGGCAGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAGCTCACCACGGCTGATCTTCCTCTGCACTGGGTGGGTTTGGCAGT  100

seq1  GTAAGAATGAAAATCCAAAGTTGAGAGCTACCTTTTTGTTTTCTTTTAAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAGAATGAAAATCCAAAGTTGAGAGCTACCTTTTTGTTTTCTTTTAAC  150

seq1  AGAGCGCCATCCGATATCACACGCAATCGATGGCACCAACAACTGGTGGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCGCCATCCGATATCACACGCAATCGATGGCACCAACAACTGGTGGC  200

seq1  AGAGCCCCAGTATTCAGAATGGGAGAGAGTATCACTGGGTCACTGTCACC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCCCCAGTATTCAGAATGGGAGAGAGTATCACTGGGTCACTGTCACC  250

seq1  CTGGACTTACGGCAGGTAGGTTGGGCCAGGCCCGCTGGAGATGGTCCAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGACTTACGGCAGGTAGGTTGGGCCAGGCCCGCTGGAGATGGTCCAAA  300

seq1  GCACTCTGATGTATGCCTTGTTTTGGTTTGTTTGTTGTTTGTTTGTTTGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACTCTGATGTATGCCTTGTTTTGGTTTGTTTGTTGTTTGTTTGTTTGT  350

seq1  TTGTTTTTGAACACATTTGTCCAGGTGTTGGGTAGGTGATACATAGTATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTTTTGAACACATTTGTCCAGGTGTTGGGTAGGTGATACATAGTATT  400

seq1  ATGTGGTAGCACTTCTTCACCTATACGGTCCTGGTCCAAGCCTAGAGTAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGGTAGCACTTCTTCACCTATACGGTCCTGGTCCAAGCCTAGAGTAT  450

seq1  GAGGGTATATCTGGTCGGGCCTATGGTATGTGTGTGTATGGGACTATGGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGTATATCTGGTCGGGCCTATGGTATGTGTGTGTATGGGACTATGGG  500

seq1  TAGGGGAGG  509
      |||||||||
seq2  TAGGGGAGG  509