MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-161L13
Chromosome	17 (Build37)
Map Location	58,085,906 - 58,086,999
singlet/doublet	singlet
Overlap gene	Cntnap5c
Upstream gene	Asah3, Clpp, Alkbh7, Pspn, Gtf2f1, Khsrp, Slc25a41, Slc25a23, Crb3, Dennd1c, Tubb4, Tnfsf9, Cd70, Tnfsf14, C3, Gpr108, Trip10, LOC668635, Vav1, Emr1, EG224916, LOC674419
Downstream gene	LOC620408, EG545216, LOC668648, 2610034M16Rik
Link	Open Mouse BAC browser

Click to get alignment info.

name	Asah3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:171168 MGI:2181962
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Clpp (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:53895 MGI:1858213
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Alkbh7 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66400 MGI:1913650
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Pspn (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:19197 MGI:1201684
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Gtf2f1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:98053 MGI:1923848
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Khsrp (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:16549 MGI:1336214
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Slc25a41 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:103775 MGI:2144215
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Slc25a23 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66972 MGI:1914222
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Crb3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:224912 MGI:2670904
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Dennd1c (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:70785 MGI:1918035
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Tubb4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:22153 MGI:107848
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Tnfsf9 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:21950 MGI:1101058
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Cd70 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:21948 MGI:1195273
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Tnfsf14 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:50930 MGI:1355317
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	C3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12266 MGI:88227
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Gpr108 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:78308 MGI:1925558
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Trip10 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:106628 MGI:2146901
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC668635 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:668635
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein pseudo : _no_value

name	Vav1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:22324 MGI:98923
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Emr1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:13733 MGI:106912
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG224916 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:224916 MGI:3644483
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 14 Proteins

name	Cntnap5c (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:620292 MGI:3646013
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC674419 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:674419
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 18 mRNAs, 1405 ESTs, 12 Proteins

name	LOC620408 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:620408
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins pseudo : _no_value

name	EG545216 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:545216 MGI:3648184
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 79 ESTs, 11 Proteins

name	LOC668648 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:668648
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins pseudo : _no_value

name	2610034M16Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:69239 MGI:1916489
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Asah3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802077 GeneID:171168 MGI:2181962
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : N-acylsphingosine amidohydrolase (alkaline ceramidase) 3 transcript_id : NM_175731.3

name	Clpp (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:8393155 GeneID:53895 MGI:1858213
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : caseinolytic peptidase, ATP-dependent, proteolytic subunit homolog (E. coli) transcript_id : NM_017393.1

name	Alkbh7 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142381110 GeneID:66400 MGI:1913650
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : alkB, alkylation repair homolog 7 (E. coli) transcript_id : NM_025538.2

name	Pspn (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6679510 GeneID:19197 MGI:1201684
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : persephin transcript_id : NM_008954.1

name	Gtf2f1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130859 GeneID:98053 MGI:1923848
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : general transcription factor IIF, polypeptide 1 transcript_id : NM_133801.2

name	Khsrp (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:51492006 GeneID:16549 MGI:1336214
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : KH-type splicing regulatory protein transcript_id : NM_010613.2

name	Slc25a41 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142347984 GeneID:103775 MGI:2144215
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : solute carrier family 25, member 41 transcript_id : NM_175333.3

name	Slc25a23 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:70980533 GeneID:66972 MGI:1914222
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 23 transcript_id : NM_025877.3

name	Crb3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130453 GeneID:224912 MGI:2670904
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : crumbs homolog 3 (Drosophila) transcript_id : NM_177638.4

name	Dennd1c (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:24025655 GeneID:70785 MGI:1918035
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : DENN/MADD domain containing 1C transcript_id : NM_153551.1

name	Tubb4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31981938 GeneID:22153 MGI:107848
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : tubulin, beta 4 transcript_id : NM_009451.3

name	Tnfsf9 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141803209 GeneID:21950 MGI:1101058
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : tumor necrosis factor (ligand) superfamily, member 9 transcript_id : NM_009404.3

name	Cd70 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:133892213 GeneID:21948 MGI:1195273
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : CD70 antigen transcript_id : NM_011617.2

name	Tnfsf14 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:133892635 GeneID:50930 MGI:1355317
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : tumor necrosis factor (ligand) superfamily, member 14 transcript_id : NM_019418.2

name	C3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:126518316 GeneID:12266 MGI:88227
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : complement component 3 transcript_id : NM_009778.2

name	Gpr108 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130680 GeneID:78308 MGI:1925558
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : G protein-coupled receptor 108 transcript_id : NM_030084.3

name	Trip10 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142353957 GeneID:106628 MGI:2146901
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : thyroid hormone receptor interactor 10 transcript_id : NM_134125.2

name	Vav1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802217 GeneID:22324 MGI:98923
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : vav 1 oncogene transcript_id : NM_011691.3

name	Emr1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142368838 GeneID:13733 MGI:106912
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : EGF-like module containing, mucin-like, hormone receptor-like sequence 1 transcript_id : NM_010130.2

name	EG224916 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149268772 GeneID:224916 MGI:3644483
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 14 Proteins product : predicted gene, EG224916 transcript_id : XM_140062.7

name	Cntnap5c (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:126116575 GeneID:620292 MGI:3646013
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : contactin associated protein-like 5C transcript_id : NM_001081653.1

name	LOC674419 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149268883 GeneID:674419
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 18 mRNAs, 1405 ESTs, 12 Proteins product : similar to ribosomal protein L7a transcript_id : XM_001481160.1

name	EG545216 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149268776 GeneID:545216 MGI:3648184
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 79 ESTs, 11 Proteins product : predicted gene, EG545216 transcript_id : XM_619479.4

name	2610034M16Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:110625716 GeneID:69239 MGI:1916489
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 2610034M16 gene transcript_id : NM_027001.1

name	Asah3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:28376625 CCDS:CCDS28919.1 GeneID:171168 MGI:2181962
definition	GO_component : GO:0005783 - endoplasmic reticulum [Evidence IDA]; GO:0005789 - endoplasmic reticulum membrane [Evidence IEA]; GO:0000139 - Golgi membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0017040 - ceramidase activity [Evidence IDA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0016811 - hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides [Evidence IEA] GO_process : GO:0046514 - ceramide catabolism [Evidence IDA]; GO:0006672 - ceramide metabolism [Evidence IEA]; GO:0006629 - lipid metabolism [Evidence IEA]; GO:0019216 - regulation of lipid metabolism [Evidence IDA]; GO:0006665 - sphingolipid metabolism [Evidence IDA] codon_start : 1 note : alkaline ceramidase product : N-acylsphingosine amidohydrolase 3 protein_id : NP_783858.1

name	Clpp (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:8393156 CCDS:CCDS28920.1 GeneID:53895 MGI:1858213
definition	GO_component : GO:0005739 - mitochondrion [Evidence IDA] GO_function : GO:0008462 - endopeptidase Clp activity [Evidence ISS] [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0008233 - peptidase activity [Evidence IEA]; GO:0004252 - serine-type endopeptidase activity [Evidence IEA] GO_process : GO:0006515 - misfolded or incompletely synthesized protein catabolism [Evidence ISS]; GO:0006508 - proteolysis [Evidence IEA] codon_start : 1 product : caseinolytic protease, ATP-dependent, proteolytic subunit homolog protein_id : NP_059089.1

name	Alkbh7 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21313470 CCDS:CCDS28921.1 GeneID:66400 MGI:1913650
definition	codon_start : 1 product : spermatogenesis associated 11 protein_id : NP_079814.1

name	Pspn (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6679511 CCDS:CCDS28922.1 GeneID:19197 MGI:1201684
definition	GO_component : GO:0005615 - extracellular space [Evidence IDA] GO_function : GO:0008083 - growth factor activity [Evidence IEA]; GO:0005102 - receptor binding [Evidence TAS] GO_process : GO:0001658 - ureteric bud branching [Evidence IDA] codon_start : 1 exception : mismatches in translation product : persephin protein_id : NP_032980.1

name	Gtf2f1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:20270031 GeneID:98053 MGI:1923848
definition	GO_function : GO:0016563 - transcriptional activator activity [Evidence IEA]; GO:0003743 - translation initiation factor activity [Evidence IEA] GO_process : GO:0045941 - positive regulation of transcription [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : general transcription factor IIF polypeptide 1 (74kD subunit) product : general transcription factor IIF, polypeptide 1 protein_id : NP_598562.1

name	Khsrp (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:51492007 GeneID:16549 MGI:1336214
definition	codon_start : 1 product : KH-type splicing regulatory protein protein_id : NP_034743.2

name	Slc25a41 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30425020 GeneID:103775 MGI:2144215
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]; GO:0005743 - mitochondrial inner membrane [Evidence IEA] GO_function : GO:0005488 - binding [Evidence IEA]; GO:0005215 - transporter activity [Evidence IEA] GO_process : GO:0006810 - transport [Evidence IEA] codon_start : 1 product : solute carrier family 25, member 41 protein_id : NP_780542.1

name	Slc25a23 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:49274632 CCDS:CCDS28923.1 GeneID:66972 MGI:1914222
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]; GO:0005743 - mitochondrial inner membrane [Evidence IEA] GO_function : GO:0005488 - binding [Evidence IEA]; GO:0005509 - calcium ion binding [Evidence IEA]; GO:0005215 - transporter activity [Evidence IEA] GO_process : GO:0006810 - transport [Evidence IEA] codon_start : 1 product : solute carrier family 25, member 23 protein_id : NP_080153.2

name	Crb3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:29244038 CCDS:CCDS28924.1 GeneID:224912 MGI:2670904
definition	GO_component : GO:0016324 - apical plasma membrane [Evidence ISS]; GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]; GO:0005923 - tight junction [Evidence IEA] GO_function : GO:0005515 - protein binding [Evidence ISS] GO_process : GO:0045198 - establishment of epithelial cell polarity [Evidence ISS]; GO:0045216 - intercellular junction assembly and maintenance [Evidence ISS] codon_start : 1 product : crumbs homolog 3 protein_id : NP_808306.1

name	Dennd1c (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:24025656 GeneID:70785 MGI:1918035
definition	codon_start : 1 product : DENN/MADD domain containing 1C protein_id : NP_705779.1

name	Tubb4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31981939 CCDS:CCDS28925.1 GeneID:22153 MGI:107848
definition	GO_component : GO:0005929 - cilium [Evidence IDA]; GO:0005737 - cytoplasm [Evidence IEA]; GO:0005874 - microtubule [Evidence IEA]; GO:0043234 - protein complex [Evidence IEA] GO_function : GO:0005525 - GTP binding [Evidence IEA]; GO:0003924 - GTPase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0005200 - structural constituent of cytoskeleton [Evidence IEA]; GO:0005198 - structural molecule activity [Evidence IEA] GO_process : GO:0007018 - microtubule-based movement [Evidence IEA]; GO:0007017 - microtubule-based process [Evidence IEA]; GO:0051258 - protein polymerization [Evidence IEA] codon_start : 1 product : tubulin, beta 4 protein_id : NP_033477.2

name	Tnfsf9 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6678389 CCDS:CCDS28926.1 GeneID:21950 MGI:1101058
definition	GO_component : GO:0005615 - extracellular space [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]; GO:0005886 - plasma membrane [Evidence IEA] GO_function : GO:0005125 - cytokine activity [Evidence IEA]; GO:0005164 - tumor necrosis factor receptor binding [Evidence IEA] GO_process : GO:0006952 - defense response [Evidence IEA]; GO:0006955 - immune response [Evidence IEA] codon_start : 1 note : 4-1BB ligand product : tumor necrosis factor (ligand) superfamily, member 9 protein_id : NP_033430.1

name	Cd70 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6755839 CCDS:CCDS28927.1 GeneID:21948 MGI:1195273
definition	GO_component : GO:0005615 - extracellular space [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005125 - cytokine activity [Evidence IEA]; GO:0005164 - tumor necrosis factor receptor binding [Evidence IEA] GO_process : GO:0006955 - immune response [Evidence IEA] codon_start : 1 note : Ki-24 antigen product : tumor necrosis factor (ligand) superfamily, member 7 protein_id : NP_035747.1

name	Tnfsf14 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:9507195 CCDS:CCDS28928.1 GeneID:50930 MGI:1355317
definition	GO_component : GO:0005615 - extracellular space [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]; GO:0005886 - plasma membrane [Evidence TAS] GO_function : GO:0043027 - caspase inhibitor activity [Evidence ISS]; GO:0005125 - cytokine activity [Evidence IEA]; GO:0005164 - tumor necrosis factor receptor binding [Evidence IEA] GO_process : GO:0050798 - activated T cell proliferation [Evidence IDA]; GO:0006955 - immune response [Evidence IEA]; GO:0008588 - release of cytoplasmic sequestered NF-kappaB [Evidence ISS]; GO:0007165 - signal transduction [Evidence ISS]; GO:0043029 - T cell homeostasis [Evidence ISS] codon_start : 1 product : tumor necrosis factor ligand superfamily, member 14 protein_id : NP_062291.1

name	C3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:126518317 GeneID:12266 MGI:88227
definition	GO_component : GO:0005576 - extracellular region [Evidence IEA] GO_function : GO:0004866 - endopeptidase inhibitor activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0006956 - complement activation [Evidence IEA]; GO:0006957 - complement activation, alternative pathway [Evidence IEA]; GO:0006958 - complement activation, classical pathway [Evidence IEA]; GO:0006955 - immune response [Evidence IEA]; GO:0006954 - inflammatory response [Evidence IEA]; GO:0045087 - innate immune response [Evidence IEA]; GO:0050766 - positive regulation of phagocytosis [Evidence IMP]; GO:0001798 - positive regulation of type IIa hypersensitivity [Evidence IMP] codon_start : 1 note : complement factor 3; acylation stimulating protein product : complement component 3 protein_id : NP_033908.2

name	Gpr108 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:29150274 CCDS:CCDS28929.1 GeneID:78308 MGI:1925558
definition	GO_component : GO:0016020 - membrane [Evidence IEA] codon_start : 1 product : G protein-coupled receptor 108 protein_id : NP_084360.2

name	Trip10 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:19527354 CCDS:CCDS28930.1 GeneID:106628 MGI:2146901
definition	GO_component : GO:0005874 - microtubule [Evidence TAS] GO_function : GO:0005515 - protein binding [Evidence IPI]; GO:0004872 - receptor activity [Evidence IEA] codon_start : 1 note : Cdc42 interacting protein-4 product : thyroid hormone receptor interactor 10 protein_id : NP_598886.1

name	Vav1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31981440 CCDS:CCDS28931.1 GeneID:22324 MGI:98923
definition	GO_component : GO:0005622 - intracellular [Evidence IEA] GO_function : GO:0019992 - diacylglycerol binding [Evidence IEA]; GO:0005085 - guanyl-nucleotide exchange factor activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0030676 - Rac guanyl-nucleotide exchange factor activity [Evidence IGI]; GO:0005089 - Rho guanyl-nucleotide exchange factor activity [Evidence IGI]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0006955 - immune response [Evidence IMP]; GO:0007229 - integrin-mediated signaling pathway [Evidence IGI]; GO:0007242 - intracellular signaling cascade [Evidence IMP]; GO:0006909 - phagocytosis [Evidence IGI]; GO:0045785 - positive regulation of cell adhesion [Evidence IGI]; GO:0043087 - regulation of GTPase activity [Evidence IGI]; GO:0000074 - regulation of progression through cell cycle [Evidence IEA]; GO:0035023 - regulation of Rho protein signal transduction [Evidence IEA]; GO:0042110 - T cell activation [Evidence IMP]; GO:0030217 - T cell differentiation [Evidence TAS] codon_start : 1 exception : mismatches in translation note : vav oncogene product : vav 1 oncogene protein_id : NP_035821.2

name	Emr1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:33859546 GeneID:13733 MGI:106912
definition	GO_component : GO:0009897 - external side of plasma membrane [Evidence IDA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005509 - calcium ion binding [Evidence IEA]; GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence IEA]; GO:0007218 - neuropeptide signaling pathway [Evidence IEA]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 note : lymphocyte antigen 71; cell surface glycoprotein F4/80 product : EGF-like module containing, mucin-like, hormone receptor-like sequence 1 protein_id : NP_034260.1

name	EG224916 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149268773 GeneID:224916 MGI:3644483
definition	codon_start : 1 product : similar to putative pheromone receptor protein_id : XP_140062.7

name	Cntnap5c (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:126116576 GeneID:620292 MGI:3646013
definition	GO_function : GO:0031177 - phosphopantetheine binding [Evidence IEA] GO_process : GO:0007155 - cell adhesion [Evidence IEA] codon_start : 1 note : contactin associated protein-like 5-3 product : contactin associated protein-like 5C protein_id : NP_001075122.1

name	LOC674419 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149268884 GeneID:674419
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001481210.1

name	EG545216 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149268777 GeneID:545216 MGI:3648184
definition	codon_start : 1 product : similar to glucocorticoid induced transcript 1 protein_id : XP_619479.4

name	2610034M16Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:110625717 GeneID:69239 MGI:1916489
definition	GO_function : GO:0005515 - protein binding [Evidence IEA] codon_start : 1 product : hypothetical protein LOC69239 protein_id : NP_081277.1

name	LOC668635 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668635
definition	number : 5 pseudo : _no_value

name	LOC668635 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668635
definition	number : 4 pseudo : _no_value

name	LOC668635 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668635
definition	number : 3 pseudo : _no_value

name	LOC668635 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668635
definition	number : 2 pseudo : _no_value

name	LOC668635 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668635
definition	number : 1 pseudo : _no_value

name	LOC620408 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:620408
definition	number : 1 pseudo : _no_value

name	LOC668648 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668648
definition	number : 2 pseudo : _no_value

name	LOC668648 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668648
definition	number : 1 pseudo : _no_value

clone name	MSMg01-526J09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-326J03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-432B04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-210O11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-474A17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-474A16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-346N08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-409K21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-442M06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-458D03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-183O16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-166N05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-097H14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-518I23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-376A15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-433H16
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-069N13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-366I05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-386K02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-207H13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-342G22
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-278F10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-414I02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-342J08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-426L22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-171E07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-138B10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-427F20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-196O23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-266E04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-065B24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-406J21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-386B23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-463J07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-530E02
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-322A13
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-386J18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-454P18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-373N18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-290H16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-466H15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-368K22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-066B06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-373P03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-428K01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-060K09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-290D14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-463J20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-306N13
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-321F07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-157G24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-412K03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-344A21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-393A23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-407C18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-103J24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-547C10
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-472P22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-451I14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-395O14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-386C07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-374L02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-106M03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-106D03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-063C04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-521F07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-358P09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-521L02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-072N05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-541K04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-198K19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-469C04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-078I08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-065J06
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-139A17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-092L07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-480D07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-141B05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-446C14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-150M03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-336H21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-073A22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-229B04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-015M16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-138N11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-193A23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-141N23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-305B11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-078K23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-114M01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-055N11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-115C04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-152P13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-074J06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-345H21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-103K12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-139N13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-206D24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-009K19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-334M06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-275C24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-021B11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-329B07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-108C01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-281B03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-110G24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-334E07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-155E02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-172I21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-313J10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-123A23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-261H09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-297N18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-024P03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-039F07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-074D22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-164D23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-059P18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-158D13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-037F09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-075O23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-127K17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-018J06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-141M02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-293M23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-265J21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-183J19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-254P21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-047I13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-093L22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-047P06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-328E09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-208J22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-018B15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-021N08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-228N17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-161L13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-021I22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-053J19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-056L04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-053A15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-138H08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-182O10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-293J24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-075J15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-242C04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-293N08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-042H01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-210E24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-190A21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-153J07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-077C02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-046D23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-220L17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-308N05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-043C13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-146M20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-022L21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-089A20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-125H22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-066O05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-323N09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-329D16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-169L12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-174M17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-040L24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-333O01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-012G19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-341P04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-225P15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-261C15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-348M03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-041H02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-254C22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-066D13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-091J24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-034F12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-241M10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-274A05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-061N13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-058G12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-279O24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-027O22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-175C02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-152F13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-339B01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-250M18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-162B15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-018C23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-045D12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-277E11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-341A07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-073E13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-344D10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-220K02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-079G18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-315A21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-049N12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-308K09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-142B18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-248L16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-286H17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-143G24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-228K06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-112N03
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-161L13.b	B6Ng01-161L13.g
ACC	DH954757	DH954758
length	1,080	940
definition	DH954757\|Mus musculus domesticus DNA, BAC clone: B6Ng01-161L13, 5' end.	DH954758\|Mus musculus domesticus DNA, BAC clone: B6Ng01-161L13, 3' end.
singlet/doublet	singlet	---
BLAST hit	unique	no hit data
sequence	gaattcaaaggtagcatgatatacataccgaccctttcttaaaattaaat gaataatttaaaaaataaaagaaatcagtacagagcctagaggagggagt tgggacatggttggtactatggagaagtggtgaagactggcacctctggg atagcacacaacaagtaacatttgtccatacaaaaccaagtatgtctttt taaaaattcttttcagtgctggaagaccactcagtgagtaagaatgcttg gtctgcaagcttgggcacttgagtttgtaaaatttttgagcataactaca ggtgattatatcccatgcattaggggacagacaaaagtaaaccctgagag ttcactgttcaatggactgggacaaaatagtgagcttccagttcactgaa agaagaaaaccatagagaaaggcaccagatatcgtgttatagcctttgtc agcatccacatgggcttgtgcgtcaacacactcacatgcatgcactacat aaacatacatcacaaacacaacattcacatacacaacaaataaacacaca catacttacacacacgcacatgcacacgcaccaaggggagacacttcatt catggcagagaagttcagatagaccttatctttctcccttgaaatgagtt agcttatgtcacagcttgctgaagaactctgaactgtgagtggtggtcaa tatccttcctggtccttgcagcactgaatattgtcacagtagtgttccct aactgtaaacttcgtacaaattgcttggctgcttagcagtggtatttatg ctagcttcagggggcataggtaagccttgaaatatgccctagaggaattc ctggctaatttcataggagagcttaaaatgatggagatcagaaaagtatt agcaccagggtcataccattctgctgctttgtctctctttattgttccca aatccttgtaagactggagcacacttctgaatgctcactgccttcaatct cacactatactttcttgtgcttgctttccagcttgaaaccatgcctgaat tctggctcagttactcctaacagccaaggc	gaattctttgtttagctctgaaccccattttttaatgaagttatttgatt ttctggagtccagcttcttgagctctttatatatattggatattagtccc ctatcagatttaggattggttaaaatcctttcccaatctgttggaggcct ttttgtcttattgacattgtcttttgccttacagaagttttgcaatttta tgaagtcccatttgtcaattcttgaccttacagcacaagccattgctgtt ctgtttaggaatttttcccctgtgcccatattttcgaggcttttccccat tttctcctctattaatttcagtatctctggtcttatgtggaggtctttga tccacttagaaagtcccccgtttttattgtatggggtgcagtgtgtgctt tgagctttagtaaagtttcttttatgaatgtgggtacccttgtatttgga atactgattttcataatttagatcttgttagatttttcctttgatgagta tggagtgtccttccttatttttttgataacttttggttgaaagttgattc tgttcaatattagaattttcttcgatattataattggaagcatttgcttt taatgtttttctaaagttttactctgagacagtgtcactgaggtgtgttt tcctgtatgcagtaaaatggtgggccgtgttttatgtatctgtctgctag tctatgtctttttaattggtaattgaatctattgatgttaagagatatta aggaaaaagtgatttttacttcctgttattttgttgctagagctagaatt atgtttttgtggctttcttcttttagatttgttgaaagattattttcttg ctttttccaaggattagtttccctcctggggtggcgttttccatctatta tattttggaagggtggaactttgtgaaaaatctgggtaat
quality values	Open. Hide. 39 31 36 43 53 28 21 27 32 61 42 39 61 61 53 40 43 61 47 50 50 53 53 35 12 14 12 15 14 12 18 7 10 11 13 14 36 55 55 55 50 55 61 61 61 61 52 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 43 43 35 59 28 28 41 52 49 38 52 61 61 61 61 61 61 61 61 61 61 50 61 59 61 61 59 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 59 59 61 59 61 59 61 59 61 59 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 59 61 61 61 59 52 59 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 52 49 52 43 41 37 34 34 52 52 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 55 61 50 55 61 61 61 61 61 61 61 61 61 61 61 45 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 55 61 61 61 61 55 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 50 61 55 43 61 61 61 61 61 61 61 50 53 61 61 53 43 61 61 47 61 61 61 53 61 61 61 53 50 43 31 27 47 45 61 61 61 61 61 61 61 61 53 61 61 61 52 61 53 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 52 61 53 61 61 61 61 61 50 61 61 61 61 50 53 43 35 47 50 61 61 47 57 53 57 57 57 53 57 53 57 53 57 57 53 57 57 53 47 47 50 57 53 47 39 43 57 57 52 40 37 28 53 53 53 50 57 33 53 53 32 46 47 53 45 53 53 42 33 53 47 53 45 57 34 57 57 57 57 57 53 53 50 57 53 52 52 53 53 57 53 53 52 53 52 41 50 53 53 57 53 57 41 37 37 33 53 53 57 47 43 57 34 47 50 35 53 57 41 50 14 18 15 17 10 21 52 53 43 52 33 52 14 52 53 18 38 52 38 38 28 37 28 42 50 50 50 39 53 42 47 36 53 52 47 52 47 33 42 57 52 42 30 37 42 57 57 29 38 41 31 53 21 38 35 40 52 44 37 20 31 37 35 27 36 36 37 40 52 37 40 44 37 35 53 57 15 57 42 36 40 53 37 40 53 29 33 30 53 23 33 44 17 34 41 57 21 46 27 14 33 34 39 30 41 25 29 31 12 29 53 57 30 51 44 21 33 30 29 33 48 35 34 20 34 39 34 30 29 32 39 39 36 29 30 22 25 33 21 30 30 28 20 38 20 11 47 25 36 48 51 36 35 23 33 30 17 29 21 28 51 32 29 35 39 40 17 37 38 34 34 51 13 17 27 29 29 27 47 27 23 20 23 30 28 28 23 28 23 33 26 11 22 30 33 25 18 28 51 39 28 33 29 27 22 12 14 43 22 21 33 16 13 37 29 41 33 21 22 29 14 12 31 33 29 34 21 21 29 17 22 29 43 43 20 12 41 27 23 23 43 25 30 28 13 31 29 23 19 36 9 13 18 17 14 32 10 11 29 28 39 28 29 10 6 9 43 17 25 6 21 6 15 12 14 6 22 14 51 46 28 30 28 28 24 21 17 14 16 9 25 31 9 16 20 29 31 32 14 21 9 5 7 32 10 13 9 13 20 7 10 42 33 13 28 9 9 7 7 17 6 17 8 29 16 8 19 15 24 21 19 51 23 13 11 20 16 29 13 15 15 35 26 16 14 26 9 6 6 10 35 35 8 18 7 44 8 13 6 19 8 30 30 23 15 12 11 34 17 23 26 10 8 31 15 11 11 4 10 17 18 20 19 17 21 7 5 5 9 6 8 10 19 9 9 29 16 13 13 11 12 4 4 5 4 6 29 13 10 5 6 20 17 16 42 8 10 23 22 7 5 3 3 6 17 6 7 17 9 11 5 25 7 19 14 4 9 5 8 30 23 5 8 8 6 11 14 14 23 20 23 19 14 10 27 5 11 9 4 5 7 22 9 6 5 7 3 4 1 3 10 23 6 6 5 13 10 5 13 6 4 3 19	Open. Hide. 50 61 19 36 10 13 17 11 10 8 17 13 22 32 34 35 55 55 55 61 47 55 61 61 61 61 47 61 61 61 61 61 61 52 61 61 61 61 61 61 61 61 43 55 61 61 41 41 36 30 28 49 41 35 30 32 55 59 61 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 59 61 59 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 52 61 61 61 61 59 59 61 61 61 61 61 61 61 59 59 61 59 61 59 61 61 61 61 61 61 61 61 59 61 61 61 61 61 59 61 61 61 61 59 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 52 61 61 61 55 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 55 55 61 61 61 55 61 61 37 36 43 41 41 43 61 55 61 61 61 61 49 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 52 37 55 55 61 50 50 61 61 61 61 61 55 61 61 61 55 55 61 61 61 55 61 61 61 61 61 61 61 50 55 55 55 55 55 55 55 61 61 61 61 61 61 55 61 61 61 18 17 14 11 14 23 61 61 61 61 61 61 61 47 61 61 61 61 61 61 61 47 61 55 61 61 61 23 26 21 10 19 14 61 61 47 39 61 61 61 50 53 52 50 53 47 61 61 61 47 61 45 61 50 61 61 52 53 47 35 61 61 61 61 61 47 61 61 37 61 61 61 61 47 61 61 45 61 50 61 61 61 61 61 43 61 35 61 61 40 38 52 61 39 61 61 50 61 61 50 50 52 43 31 39 31 11 28 32 28 61 61 61 61 24 15 61 61 61 61 61 36 61 61 53 52 31 47 61 50 61 38 16 39 29 26 47 39 33 21 30 10 24 31 30 61 52 47 53 50 53 61 39 53 53 42 40 40 47 36 20 29 32 40 37 45 50 52 34 50 42 53 53 53 45 42 53 53 47 53 47 39 30 52 25 53 39 47 53 50 45 42 53 52 42 40 28 32 21 15 32 30 57 52 53 50 42 40 30 30 45 21 24 14 47 27 40 27 38 30 8 31 38 52 29 42 7 47 50 30 36 38 38 53 24 19 21 37 34 30 26 36 52 43 53 11 29 53 36 37 53 45 47 20 53 34 20 53 25 53 28 20 38 32 30 13 15 23 30 30 50 18 45 34 38 30 33 35 13 27 52 24 45 17 53 27 37 29 15 46 21 41 12 8 16 22 34 41 9 31 50 24 36 38 31 41 21 45 12 22 8 18 19 21 14 47 29 30 23 17 19 38 17 37 12 12 34 12 26 16 13 34 24 53 53 53 32 27 22 24 17 8 12 7 5 8 23 37 20 32 37 17 12 22 11 17 20 24 41 52 12 23 9 35 32 28 22 21 8 15 12 30 20 14 22 29 57 21 32 21 28 14 11 20 20 24 19 28 28 31 10 10 13 5 9 13 20 37 22 20 35 44 13 18 7 26 14 30 26 17 14 30 31 19 45 35 9 37 13 38 35 30 48 53 14 22 25 30 14 9 27 38 33 18 29 5 19 12 14 17 14 14 8 7 13 6 24 40 26 31 46 41 18 30 30 30 19 20 19 8 11 26 30 24 8 14 30 33 31 29 21 23 35 39 28 25 18 16 6 9 9 5 9 7 28 14 12 9 13 29 36 5 27 29 20 8 14 18 34 26 11 9 29 32 33 33 33 30 15 21 7 15 10 30 20 14 13 11 4

Alignment Information

BAC End 1

BAC End 2

seq1: chr17_58085906_58086999
seq2: B6Ng01-161L13.b_47_1126 (reverse)

seq1  GCCTTTTGCTGTTAGAAAGTGTAACTGAGCAGGAATTCAGGCTTGTTTTT  50
      ||| || ||||||||   | ||||||||||  |||||||||| ||  |||
seq2  GCC-TTGGCTGTTAG---GAGTAACTGAGCCAGAATTCAGGCATG-GTTT  45

seq1  CAGGCTGGAAAAGCAAAGACCAAAGAAAGTATAGTTGTGAGA-TGAAAGC  99
      || ||||| |||||||  ||  |||||||||||| ||||||| |||| ||
seq2  CAAGCTGG-AAAGCAAGCAC--AAGAAAGTATAG-TGTGAGATTGAAGGC  91

seq1  AGTGAGCATTCAGATGTTGTTGCTCCAGTCTTTAACAAGGAATTGGG-AC  148
      |||||||||||||| ||   ||||||||||||  ||||||| ||||| ||
seq2  AGTGAGCATTCAGAAGT--GTGCTCCAGTCTT--ACAAGGATTTGGGAAC  137

seq1  AATAAAGAGAGACAAAGCAGGCAG-ATGGTATGACCCTTGGTGCTTACTA  197
      ||||||||||||||||||| |||| |||||||||||| |||||| || ||
seq2  AATAAAGAGAGACAAAGCA-GCAGAATGGTATGACCC-TGGTGC-TAATA  184

seq1  CTTTTCTGATCCTCCATCATTTT-AGCTCTCCTATGTAATTTAGCCAGG-  245
      |||||||||| |||||||||||| |||||||||||| || ||||||||| 
seq2  CTTTTCTGAT-CTCCATCATTTTAAGCTCTCCTATG-AAATTAGCCAGGA  232

seq1  ATTCCTCTAGGGCATTATTTCAAGGCTTACCTATGCCCCCTGAAGCTAAG  295
      |||||||||||||| |||||||||||||||||||||||||||||||| ||
seq2  ATTCCTCTAGGGCA-TATTTCAAGGCTTACCTATGCCCCCTGAAGCT-AG  280

seq1  CATAAATACCACTGCTAAGCAGCCAAGCAATTTGTACGAAGTTTACAGTT  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAAATACCACTGCTAAGCAGCCAAGCAATTTGTACGAAGTTTACAGTT  330

seq1  AGGGAACACTACTGTGACAATATTCAGTGCTGCAAGGACCAGGAAGGATA  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGAACACTACTGTGACAATATTCAGTGCTGCAAGGACCAGGAAGGATA  380

seq1  TTGACCACCACTCACAGTTCAGAGTTCTTCAGCAAGCTGTGACATAAGCT  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGACCACCACTCACAGTTCAGAGTTCTTCAGCAAGCTGTGACATAAGCT  430

seq1  AACTCATTTCAAGGGAGAAAGATAAGGTCTATCTGAACTTCTCTGCCATG  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCATTTCAAGGGAGAAAGATAAGGTCTATCTGAACTTCTCTGCCATG  480

seq1  AATGAAGTGTCTCCCCTTGGTGCGTGTGCATGTGCGTGTGTGTAAGTATG  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAAGTGTCTCCCCTTGGTGCGTGTGCATGTGCGTGTGTGTAAGTATG  530

seq1  TGTGTGTTTATTTGTTGTGTATGTGAATGTTGTGTTTGTGATGTATGTTT  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTTTATTTGTTGTGTATGTGAATGTTGTGTTTGTGATGTATGTTT  580

seq1  ATGTAGTGCATGCATGTGAGTGTGTTGACGCACAAGCCCATGTGGATGCT  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTAGTGCATGCATGTGAGTGTGTTGACGCACAAGCCCATGTGGATGCT  630

seq1  GACAAAGGCTATAACACGATATCTGGTGCCTTTCTCTATGGTTTTCTTCT  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAAAGGCTATAACACGATATCTGGTGCCTTTCTCTATGGTTTTCTTCT  680

seq1  TTCAGTGAACTGGAAGCTCACTATTTTGTCCCAGTCCATTGAACAGTGAA  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGTGAACTGGAAGCTCACTATTTTGTCCCAGTCCATTGAACAGTGAA  730

seq1  CTCTCAGGGTTTACTTTTGTCTGTCCCCTAATGCATGGGATATAATCACC  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCAGGGTTTACTTTTGTCTGTCCCCTAATGCATGGGATATAATCACC  780

seq1  TGTAGTTATGCTCAAAAATTTTACAAACTCAAGTGCCCAAGCTTGCAGAC  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGTTATGCTCAAAAATTTTACAAACTCAAGTGCCCAAGCTTGCAGAC  830

seq1  CAAGCATTCTTACTCACTGAGTGGTCTTCCAGCACTGAAAAGAATTTTTA  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGCATTCTTACTCACTGAGTGGTCTTCCAGCACTGAAAAGAATTTTTA  880

seq1  AAAAGACATACTTGGTTTTGTATGGACAAATGTTACTTGTTGTGTGCTAT  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGACATACTTGGTTTTGTATGGACAAATGTTACTTGTTGTGTGCTAT  930

seq1  CCCAGAGGTGCCAGTCTTCACCACTTCTCCATAGTACCAACCATGTCCCA  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGAGGTGCCAGTCTTCACCACTTCTCCATAGTACCAACCATGTCCCA  980

seq1  ACTCCCTCCTCTAGGCTCTGTACTGATTTCTTTTATTTTTTAAATTATTC  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCCCTCCTCTAGGCTCTGTACTGATTTCTTTTATTTTTTAAATTATTC  1030

seq1  ATTTAATTTTAAGAAAGGGTC-TTATGTATATCATGCTACCTTTGAATTC  1094
      |||||||||||||||||||||  |||||||||||||||||||||||||||
seq2  ATTTAATTTTAAGAAAGGGTCGGTATGTATATCATGCTACCTTTGAATTC  1080

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information