BAC Information

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BAC

Clone NameB6Ng01-164E01
Chromosome17 (Build37)
Map Location 82,211,833 - 82,344,248
singlet/doubletdoublet
Overlap genenone
Upstream geneC230072F16Rik, LOC675572, EG668830, Tmem178, Thumpd2, LOC100043700, LOC100043704, Slc8a1, EG668832
Downstream geneLOC100043707, LOC625467, LOC668836, EG433141, EG625514
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-164E01.bB6Ng01-164E01.g
ACCDH956627DH956628
length993370
definitionDH956627|Mus musculus domesticus DNA, BAC clone: B6Ng01-164E01, 5' end.DH956628|Mus musculus domesticus DNA, BAC clone: B6Ng01-164E01, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(82,211,833 - 82,212,721)(82,343,874 - 82,344,248)
sequence
gaattcaacaaattctttcatgttatagtttgagatgataacataggtaa
aaattgatttaaaacccccatgaatacacaaactaatcgttctattttat
attacaataggatatattttcatcagtattaatttatttttaatggaaat
tattttcactttaggatgaattaaatcgttgaaaattgtctacaaatatg
tcaattttatgtctaccaacataaaaaaaaccaatattcagtaaagaaat
atagcaatcattgaacaattattttagaacatccttttactctcaggatg
atgctggtatgcatagaaaatcaatagcaggcttttggatggaatatcgt
gctttaatttggacaacttttgagaacttagaaagctacttaaaatgttc
cttagatatctgttaaatccatttgtttcataacttctgttagtttcact
gtctgactaaaatcagggaatagacaaggctgcccactttctccctaacc
attcaacattgtacttgaagtcctagcaagagcaattcaacaacaaaagg
agataaaggggatacaagtttgaaaggaagaggtcaaaatatcacttttt
gcagatgatatgatagtacatataagtgaccctaaaaattccaccagaga
actcctaaacctgataaacagcttcaatgaagtagctggatataaaatta
actcaaaggagtcaatggcctatctctacacaaaggataaacaggctgag
aaagatattagggaaacaacacccttcacaatagtcacaaataatataaa
ataccttggcatgaatctaactaaggaagtgaaagagctgtatgataaga
acttcaagcctctgaagaaagaaattaaagaagatctcagaagatggaaa
gatctcccatgctcatggattggcaggatcatatagtaaaatggctatct
tgccaaagcaatctacagattcaatgcatcccatcaaattcta
ctgagtgtgcaaaggagtatatttgtgcattccttgggtcttctcttgga
ctccttttcttctgattgtttgtgttgtcccattctgatttgtttttctt
atattagtttttatttcattgctatctcttaggaatctatttgtttttct
aataagagacagaaaaggaaaagatctgggtgggaggagaaggagtagag
gaacttgaaggagtagagggtggggaacatattgtatgagaaaaatcata
ttaactaaacatgaataataataataataaatgaatgatggattgaagtg
aagtcatgcagatgttattgcaaaggcaggaaatacctactacttgagtt
gttttctatcccaagtatag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_82211833_82212721
seq2: B6Ng01-164E01.b_46_934

seq1  GAATTCAACAAATTCTTTCATGTTATAGTTTGAGATGATAACATAGGTAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAACAAATTCTTTCATGTTATAGTTTGAGATGATAACATAGGTAA  50

seq1  AAATTGATTTAAAACCCCCATGAATACACAAACTAATCGTTCTATTTTAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTGATTTAAAACCCCCATGAATACACAAACTAATCGTTCTATTTTAT  100

seq1  ATTACAATAGGATATATTTTCATCAGTATTAATTTATTTTTAATGGAAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACAATAGGATATATTTTCATCAGTATTAATTTATTTTTAATGGAAAT  150

seq1  TATTTTCACTTTAGGATGAATTAAATCGTTGAAAATTGTCTACAAATATG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTCACTTTAGGATGAATTAAATCGTTGAAAATTGTCTACAAATATG  200

seq1  TCAATTTTATGTCTACCAACATAAAAAAAACCAATATTCAGTAAAGAAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATTTTATGTCTACCAACATAAAAAAAACCAATATTCAGTAAAGAAAT  250

seq1  ATAGCAATCATTGAACAATTATTTTAGAACATCCTTTTACTCTCAGGATG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGCAATCATTGAACAATTATTTTAGAACATCCTTTTACTCTCAGGATG  300

seq1  ATGCTGGTATGCATAGAAAATCAATAGCAGGCTTTTGGATGGAATATCGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTGGTATGCATAGAAAATCAATAGCAGGCTTTTGGATGGAATATCGT  350

seq1  GCTTTAATTTGGACAACTTTTGAGAACTTAGAAAGCTACTTAAAATGTTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTAATTTGGACAACTTTTGAGAACTTAGAAAGCTACTTAAAATGTTC  400

seq1  CTTAGATATCTGTTAAATCCATTTGTTTCATAACTTCTGTTAGTTTCACT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAGATATCTGTTAAATCCATTTGTTTCATAACTTCTGTTAGTTTCACT  450

seq1  GTCTGACTAAAATCAGGGAATAGACAAGGCTGCCCACTTTCTCCCTAACC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGACTAAAATCAGGGAATAGACAAGGCTGCCCACTTTCTCCCTAACC  500

seq1  ATTCAACATTGTACTTGAAGTCCTAGCAAGAGCAATTCAACAACAAAAGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCAACATTGTACTTGAAGTCCTAGCAAGAGCAATTCAACAACAAAAGG  550

seq1  AGATAAAGGGGATACAAGTTTGAAAGGAAGAGGTCAAAATATCACTTTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATAAAGGGGATACAAGTTTGAAAGGAAGAGGTCAAAATATCACTTTTT  600

seq1  GCAGATGATATGATAGTACATATAAGTGACCCTAAAAATTCCACCAGAGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGATGATATGATAGTACATATAAGTGACCCTAAAAATTCCACCAGAGA  650

seq1  ACTCCTAAACCTGATAAACAGCTTCAATGAAGTAGCTGGATATAAAATTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCCTAAACCTGATAAACAGCTTCAATGAAGTAGCTGGATATAAAATTA  700

seq1  ACTCAAAGGAGTCAATGGCCTATCTCTACACAAAGGATAAACAGGCTGAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCAAAGGAGTCAATGGCCTATCTCTACACAAAGGATAAACAGGCTGAG  750

seq1  AAAGATATTAGGGAAACAACACCCTTCACAATAGTCACAAATAATATAAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGATATTAGGGAAACAACACCCTTCACAATAGTCACAAATAATATAAA  800

seq1  ATACCTTGGCATGAATCTAACTAAGGAAGTGAAAGAGCTGTATGATAAGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACCTTGGCATGAATCTAACTAAGGAAGTGAAAGAGCTGTATGATAAGA  850

seq1  ACTTCAAGCCTCTGAAGAAAGAAATTAAAGAAGATCTCA  889
      |||||||||||||||||||||||||||||||||||||||
seq2  ACTTCAAGCCTCTGAAGAAAGAAATTAAAGAAGATCTCA  889

seq1: chr17_82343874_82344248
seq2: B6Ng01-164E01.g_65_439 (reverse)

seq1  TATACTTTGGATTGAAAACAACTCAAGTAGTAGATATTTCCTGCCTTTGC  50
      ||||||| |||| |||||||||||||||||||| ||||||||||||||||
seq2  TATACTTGGGATAGAAAACAACTCAAGTAGTAGGTATTTCCTGCCTTTGC  50

seq1  AATAACATCTGCATGACTTCACTTCAATCCATCATTCATTTATTATTATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAACATCTGCATGACTTCACTTCAATCCATCATTCATTTATTATTATT  100

seq1  ATTATTCATGTTTAGTTAATATGATTTTTCTCATACAATATGTTCCCCAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATTCATGTTTAGTTAATATGATTTTTCTCATACAATATGTTCCCCAC  150

seq1  CCTCTACTCCTTCAAGTTCCTCTACTCCTTCTCCTCCCACCCAGATCTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTACTCCTTCAAGTTCCTCTACTCCTTCTCCTCCCACCCAGATCTTT  200

seq1  TCCTTTTCTGTCTCTTATTAGAAAAACAAATAGATTCCTAAGAGATAGCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTTTCTGTCTCTTATTAGAAAAACAAATAGATTCCTAAGAGATAGCA  250

seq1  ATGAAATAAAAACTAATATAAGAAAAACAAATCAGAATGGGACAACACAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAATAAAAACTAATATAAGAAAAACAAATCAGAATGGGACAACACAA  300

seq1  ACAATCAGAAGAAAAGGAGTCCAAGAGAAGACCCAAGGAATGCACAAATA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATCAGAAGAAAAGGAGTCCAAGAGAAGACCCAAGGAATGCACAAATA  350

seq1  TACTCCTTTGCACACTCAGGAATTC  375
      |||||||||||||||||||||||||
seq2  TACTCCTTTGCACACTCAGGAATTC  375