BAC Information

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BAC

Clone NameB6Ng01-166C18
Chromosome17 (Build37)
Map Location 44,195,440 - 44,324,741
singlet/doubletdoublet
Overlap geneEnpp5, Enpp4
Upstream geneTnfrsf21, LOC100043770, Gpr110, Gpr116, Mep1a, LOC100043332, Pla2g7, Tdrd6, Slc25a27, Cyp39a1, Dscr1l1
Downstream geneClic5, Runx2, Supt3h, 4930564C03Rik, EG210562
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-166C18.bB6Ng01-166C18.g
ACCDH958022DH958023
length7571,175
definitionDH958022|Mus musculus domesticus DNA, BAC clone: B6Ng01-166C18, 5' end.DH958023|Mus musculus domesticus DNA, BAC clone: B6Ng01-166C18, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(44,323,985 - 44,324,741)(44,195,440 - 44,196,650)
sequence
gaattcctcattctcctatctcaaaaccttctaagtgctgcttacaggtg
taggtcaccacatccagctttctctttctctttctctttctctttctctt
tctctttctctttctctttctctttctctttctctttctctttctctttc
tctttctctttctcttcctcttcctcttcctctttctttctctttctctt
tctcttcctcttcctctttccctttcttcctttctttccttctttctttc
agaactatgatacagatatactgtgctcacatcctgtaagcatagctcaa
tgtattttcaccagctgctaccagcactagatgaaggaataaaatattga
cttcttgctcttttttttttcttctgcttttccactcacccaaggtaacc
atgactcaaacttgaaatagtctaaagtgagagttagggttggtaggttg
aagctactaacgctggtttctttcaaccataatggcattggacacatttc
ccatagatatagactttggtagaggtgttgttaaatcacggaatataaga
aggttcttgataaatattctctcatgcttttctgaagttctttcctcccc
tgcccccacattcccacctcttatttcttttttacaagtagttgcaggag
ctggggagatgctccggatgcgaagtgcatgtcaggcaaggaagaggcct
tgagctgggaacaccatcaactcaattgggcaggcttgtggcatggctcg
gctccca
gaattcccataagattcaaaagattgagagttgatacaggggatgtgtga
agttctgttgaagaacagaagtacagataaagttgggaagccaactttca
caattccatcaccaacagaacactgcaactgcttttcagagacagactcc
cctagctcatcattctcaaatagaatgatggctgaaccattgccatggac
acaagcagaagtgacagaacctgcatcctgaagatgatggagggcctctg
ctcttcataatgcaaaccaagagagaggaaatggccaactgcaccaaagc
atgggaattcaccttgtccaaaccaaagcatcatgttaatgataaagaca
ctgggggactatacaaacacaaaagacaagtatatgcacttatggcttat
aaattactcggcagctgctgaggctggacatccttcatgctcccctcaaa
cacttaacggccttaaggctacatttatatctctcttgggactaatgagg
gttatggataggaaagaacacagcataactttccttacattagtgttccc
aacaatcccccttgcaggatgatagtgttagcaggtagggtcacaaatac
aaacatagaacccatccccaaaggaatgcagaactctgtgatggtcccag
tgggaagacattttaccctggactaaatacccattcctgcaagaagagat
aagaaggtctactaatacagggaaaaaatattgagcattgtggggagcta
gattgacccacggttttcccagaggccctgatgaaaagacaaagggaact
gtagctctgtgtccttggctaagtgcaagtttggccatcctgatctgaga
atgaagccagtgcctggaaagagagaaggcgtcaagtgttgtgtttctgt
ggactcgactctgactgtgggctgtgtttctaaagcagctgtgtctgagt
agcctgcattctctttgctggcatttgtcggacttcactctctactgact
ggtcactttcctctgcaatagtatatagatgtacacttctaatatctgct
tgcataaatcatcaggtatggagactcctggtccaggatgttttatcttc
ttttactttcatctttttccatctagctcctactcacaaccttggatctg
gtgcctatctgcagtttctgtcaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_44323985_44324741
seq2: B6Ng01-166C18.b_44_800 (reverse)

seq1  TGGGAGCCGAGCCAAGCCACCAAGCCTGCCCAATTGAGTTGATGGAGTTC  50
      |||||||||||||| |||| ||||||||||||||||||||||||| ||||
seq2  TGGGAGCCGAGCCATGCCA-CAAGCCTGCCCAATTGAGTTGATGGTGTTC  49

seq1  CCAGCTCAAGGCCTCTTGCTTGCCTGACATGCACTTCACATCCGGAGCAT  100
      ||||||||||||||||| ||||||||||||||||||| ||||||||||||
seq2  CCAGCTCAAGGCCTCTTCCTTGCCTGACATGCACTTCGCATCCGGAGCAT  99

seq1  CTCCCCAGCT-CTGCAACTACTTGTAAAAAAGAAATAAGAGGTGGGAATG  149
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  CTCCCCAGCTCCTGCAACTACTTGTAAAAAAGAAATAAGAGGTGGGAATG  149

seq1  TGGGGGCAGGGGAGGAAAGAACTTCAGAAAAGCATGAGAGAATATTTATC  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGGCAGGGGAGGAAAGAACTTCAGAAAAGCATGAGAGAATATTTATC  199

seq1  AAGAACCTTCTTATATTCCGTGATTTAACAACACCTCTACCAAAGTCTAT  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAACCTTCTTATATTCCGTGATTTAACAACACCTCTACCAAAGTCTAT  249

seq1  ATCTATGGGAAATGTGTCCAATGCCATTATGGTTGAAAGAAACCAGCGTT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTATGGGAAATGTGTCCAATGCCATTATGGTTGAAAGAAACCAGCGTT  299

seq1  AGTAGCTTCAACCTACCAACCCTAACTCTCACTTTAGACTATTTCAAGTC  349
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  AGTAGCTTCAACCTACCAACCCTAACTCTCACTTTAGACTATTTCAAGTT  349

seq1  TGAGTCATGGTTACCTTGGGTGAGTGGAAAAGCAGAAGAAAAAAAAAAGA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTCATGGTTACCTTGGGTGAGTGGAAAAGCAGAAGAAAAAAAAAAGA  399

seq1  GCAAGAAGTCAATATTTTATTCCTTCATCTAGTGCTGGTAGCAGCTGGTG  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAGAAGTCAATATTTTATTCCTTCATCTAGTGCTGGTAGCAGCTGGTG  449

seq1  AAAATACATTGAGCTATGCTTACAGGATGTGAGCACAGTATATCTGTATC  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATACATTGAGCTATGCTTACAGGATGTGAGCACAGTATATCTGTATC  499

seq1  ATAGTTCTGAAAGAAAGAAGGAAAGAAAGGAAGAAAGGGAAAGAGGAAGA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGTTCTGAAAGAAAGAAGGAAAGAAAGGAAGAAAGGGAAAGAGGAAGA  549

seq1  GGAAGAGAAAGAGAAAGAGAAAGAAAGAGGAAGAGGAAGAGGAAGAGAAA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGAGAAAGAGAAAGAGAAAGAAAGAGGAAGAGGAAGAGGAAGAGAAA  599

seq1  GAGAAAGAGAAAGAGAAAGAGAAAGAGAAAGAGAAAGAGAAAGAGAAAGA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAAGAGAAAGAGAAAGAGAAAGAGAAAGAGAAAGAGAAAGAGAAAGA  649

seq1  GAAAGAGAAAGAGAAAGAGAAAGAGAAAGAGAAAGAGAAAGCTGGATGTG  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGAGAAAGAGAAAGAGAAAGAGAAAGAGAAAGAGAAAGCTGGATGTG  699

seq1  GTGACCTACACCTGTAAGCAGCACTTAGAAGGTTTTGAGATAGGAGAATG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGACCTACACCTGTAAGCAGCACTTAGAAGGTTTTGAGATAGGAGAATG  749

seq1  AGGAATTC  757
      ||||||||
seq2  AGGAATTC  757

seq1: chr17_44195440_44196650
seq2: B6Ng01-166C18.g_67_1241

seq1  GAATTCCCATAAGATTCAAAAGATTGAGAGTTGATACAGGGGATGTGTGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCATAAGATTCAAAAGATTGAGAGTTGATACAGGGGATGTGTGA  50

seq1  AGTTCTGTTGAAGAACAGAAGTACAGATAAAGTTGGGAAGCCAACTTTCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCTGTTGAAGAACAGAAGTACAGATAAAGTTGGGAAGCCAACTTTCA  100

seq1  CAATTCCATCACCAACAGAACACTGCAACTGCTTTTCAGAGACAGACTCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTCCATCACCAACAGAACACTGCAACTGCTTTTCAGAGACAGACTCC  150

seq1  CCTAGCTCATCATTCTCAAATAGAATGATGGCTGAACCATTGCCATGGAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAGCTCATCATTCTCAAATAGAATGATGGCTGAACCATTGCCATGGAC  200

seq1  ACAAGCAGAAGTGACAGAACCTGCATCCTGAAGATGATGGAGGGCCTCTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGCAGAAGTGACAGAACCTGCATCCTGAAGATGATGGAGGGCCTCTG  250

seq1  CTCTTCATAATGCAAACCAAGAGAGAGGAAATGGCCAACTGCACCAAAGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTCATAATGCAAACCAAGAGAGAGGAAATGGCCAACTGCACCAAAGC  300

seq1  ATGGGAATTCACCTTGTCCAAACCAAAGCATCATGTTAATGATAAAGACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGGAATTCACCTTGTCCAAACCAAAGCATCATGTTAATGATAAAGACA  350

seq1  CTGGGGGACTATACAAACACAAAAGACAAGTATATGCACTTATGGCTTAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGGGACTATACAAACACAAAAGACAAGTATATGCACTTATGGCTTAT  400

seq1  AAATTACTCGGCAGCTGCTGAGGCTGGACATCCTTCATGCTCCCCTCAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTACTCGGCAGCTGCTGAGGCTGGACATCCTTCATGCTCCCCTCAAA  450

seq1  CACTTAACGGCCTTAAGGCTACATTTATATCTCTCTTGGGACTAATGAGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTAACGGCCTTAAGGCTACATTTATATCTCTCTTGGGACTAATGAGG  500

seq1  GTTATGGATAGGAAAGAACACAGCATAACTTTCCTTACATTAGTGTTCCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTATGGATAGGAAAGAACACAGCATAACTTTCCTTACATTAGTGTTCCC  550

seq1  AACAATCCCCCTTGCAGGATGATAGTGTTAGCAGGTAGGGTCACAAATAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAATCCCCCTTGCAGGATGATAGTGTTAGCAGGTAGGGTCACAAATAC  600

seq1  AAACATAGAACCCATCCCCAAAGGAATGCAGAACTCTGTGATGGTCCCAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACATAGAACCCATCCCCAAAGGAATGCAGAACTCTGTGATGGTCCCAG  650

seq1  TGGGAAGACATTTTACCCTGGACTAAATACCCATTCCTGCAAGAAGAGAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGAAGACATTTTACCCTGGACTAAATACCCATTCCTGCAAGAAGAGAT  700

seq1  AAGAAGGTCTACTAATACAGGGAAAAAATATTGAGCATTGTGGGGAGCTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAGGTCTACTAATACAGGGAAAAAATATTGAGCATTGTGGGGAGCTA  750

seq1  GATTGACCCACGGTTTTCCCAGAGGCCCTGATGAAAAGACAAAGGGAACT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTGACCCACGGTTTTCCCAGAGGCCCTGATGAAAAGACAAAGGGAACT  800

seq1  GTAGCTCTGTGTCCTTGGCTAAGTGCAAGTTTGGCCATCCTGATCTGAGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGCTCTGTGTCCTTGGCTAAGTGCAAGTTTGGCCATCCTGATCTGAGA  850

seq1  ATGAAGCCAGTGCCTGGAAGGAGAGAAGGCGTCAAGTGTTGTGTTTTCTG  900
      ||||||||||||||||||| ||||||||||||||||||||||| ||||||
seq2  ATGAAGCCAGTGCCTGGAAAGAGAGAAGGCGTCAAGTGTTGTG-TTTCTG  899

seq1  TGGACTCGACTCTGACTGTGGGCTGTGTTTCTAAAGCAGCTGTGTCTGAG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  TGGACTCGACTCTGACTGTGGGCTGTGTTTCTAAAGCAGCTGTGTCTGA-  948

seq1  GTAGCCTGCATTCTCTTTGCTGGCATTTGTCGGACTTCACTCTCTACTGA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGCCTGCATTCTCTTTGCTGGCATTTGTCGGACTTCACTCTCTACTGA  998

seq1  CCTTGGTCACTTTCCCTCTGCAAATAGTATATAGGATGTTACACTTCTTA  1050
      |  |||||||||| ||||||| ||||||||||| |||| |||||||| ||
seq2  C--TGGTCACTTT-CCTCTGC-AATAGTATATA-GATG-TACACTTC-TA  1041

seq1  ATAATCTTGCTTGGCATAAATCATCAGTTTATGGAAGACCTCCTGGTCCC  1100
      || ||| ||||| ||||||||||||||  ||||| ||| |||||||| ||
seq2  AT-ATC-TGCTT-GCATAAATCATCAG-GTATGG-AGA-CTCCTGGT-CC  1084

seq1  AGGTATTGTTTTTATCTTCCTTTTTATCTTTTCTATCTTTTCTCAATCCT  1150
      ||| ||   ||||||||||  ||||| ||||   ||||||| || || ||
seq2  AGG-AT--GTTTTATCTTC--TTTTA-CTTT--CATCTTTT-TCCAT-CT  1124

seq1  AGGTCTTCCTACTCAACACCTTGACATTCTGATGCCTGTATTCTTGCAGT  1200
      ||    |||||||||  ||||||    |||| ||||| |     ||||||
seq2  AG---CTCCTACTCACAACCTTG--GATCTGGTGCCTAT----CTGCAGT  1165

seq1  TTCTGGTCAGA  1211
      |||| ||||||
seq2  TTCT-GTCAGA  1175