BAC Information

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BAC

Clone NameB6Ng01-166O09
Chromosome17 (Build37)
Map Location 9,682,545 - 9,683,420
singlet/doubletsinglet
Overlap geneEG667170
Upstream geneLOC100040817, Pde10a, 1700010I14Rik, EG667165, LOC666143
Downstream gene4932702K14Rik, Qk, LOC675815, Pacrg
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-166O09.bB6Ng01-166O09.g
ACCDH958542DH958543
length1,2351,012
definitionDH958542|Mus musculus domesticus DNA, BAC clone: B6Ng01-166O09, 5' end.DH958543|Mus musculus domesticus DNA, BAC clone: B6Ng01-166O09, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcaaatttgcaattgtttatgcatatacgactcataagaaaaaa
tgctcttcttttaagaagactgtctttggacatttaagaatttgttctag
attgcctggacaagacctcaaggcaatgccatgctagatttatatcccag
ccagattacaggccttacacaaaaataattggccatataatctcattctt
tacatcatcaaaatagtaatgccttaagataatattttggtatttttaga
gaaagtgcatgtcaaattgtaaaaatttgttcttagtgtcctcagtttct
agctgtttccacataatggtgttaattcgtgaggacttatacttaatcaa
ttgctgcaaatggatactcttatttctgattaataaataaataaattatg
cacatgtaactattaataccttttcaagctttctagttacaactgctcta
caagaaaaacaactaaaagtatagttagccattgcctatgttaaaatttt
tttatatacctggtgttccaaattagattaaaacagatataatagtcaag
tatttgagatgttttgtcaacaatttaatgttacccatgttactgagtct
ttttataattctcaaagacaaggtattgtggaactataaaaactatatct
tcttaaaaaacaaagaaggtgaagaattatatccctgtgcacattattta
aatcacatttttatttttaaaattttaaaatttggatgtcaaagaactta
ctaaatgccttatagaatcttaaaactagacataatcatgtctaggtgag
atgaaaaggatccacttattggcatatggcttgatcctgaacagcttccc
tatggggaagagggaaagcttgtgttttctctacagaatgctgcagagca
tgacaactgccagaataatttgtgtgacagttgacctgtgagttcactga
gtaacctgactgtgtgataagaagttgatttggtatatgtttttgaccca
cctttgcttgcctttgtcccagatgacaagctagctgtcttgcttcaagc
tttttaactttatggaaagaaaaacatttgagaactgtactgcctgtttg
tgtgtcatttgaacacaacctgagttatcacagaaaagagcttcagtttg
agcattgctcacatgagatccactgaagcattttccttatgttcaggggg
aggcctctggctggaacatctcttgggtgtggagt
gaattcaaactcttttataaatgttgaattcaagaggccacatcttttca
gctcagacactcactctgaaggatcttcagtctgaagttgcttgggcaac
atggttaggaagtagttttaggtctttgcagagattcaatagtgagatag
cccaatagcaaggaacgtaaatcactcaggtaatgggagattaaaagggg
aagtgacagacatgcacggccattaattctaagtccgtgtcattctccaa
tcatggattcaagttgtgattcttctccagtcctgaccaatgatgatata
agccacaatattgctgctattactgaggactttcttcaaggatatgggtt
atttggaacaagagttaaaagcacaattaccccccacgggaccctaagac
ctctggtgagtggaacacagcgcctgccccaatccaatcgcgcggaacct
gagactgtggtacatagggaagcaggctacccgggcctgatctggggcac
aagtcccttccgctcgactcgagactcgagccccgggctaccttgccagc
agagtcttgcccaacacccccaagggcccacacgggactccccacgggat
cctaagacctctggtgagtggaacacagcgcctgccccaatccaatcgtg
cggaacctgagactgtggtacatagggaagcaggctacccgggcctgatc
tggggcacaagtcccttccgctcgactcgagccccgggctaccttgccag
ctgagtcgcctgacacccgcaagggcccacacaggattccacacgtgatc
ctaagacctctagtgagtggaacacaacttctgccaggagtctggttcga
acaccagatatctgggtacttgcctttgcaagaagagagcttgcctgcag
agaatactctgcccactgaactaaggagagtgctaccctccaggtctgct
tatagaggctacagagtcacctgaagaacagctcttaacagtgacactaa
aacactagcttc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_9682545_9683420
seq2: B6Ng01-166O09.g_71_946

seq1  GAATTCAAACTCTTTTATAAATGTTGAATTCAAGAGGCCACATCTTTTCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAACTCTTTTATAAATGTTGAATTCAAGAGGCCACATCTTTTCA  50

seq1  GCTCAGACACTCACTCTGAAGGATCTTCAGTCTGAAGTTGCTTGGGCAAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCAGACACTCACTCTGAAGGATCTTCAGTCTGAAGTTGCTTGGGCAAC  100

seq1  ATGGTTAGGAAGTAGTTTTAGGTCTTTGCAGAGATTCAATAGTGAGATAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTTAGGAAGTAGTTTTAGGTCTTTGCAGAGATTCAATAGTGAGATAG  150

seq1  CCCAATAGCAAGGAACGTAAATCACTCAGGTAATGGGAGATTAAAAGGGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAATAGCAAGGAACGTAAATCACTCAGGTAATGGGAGATTAAAAGGGG  200

seq1  AAGTGACAGACATGCACGGCCATTAATTCTAAGTCCGTGTCATTCTCCAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGACAGACATGCACGGCCATTAATTCTAAGTCCGTGTCATTCTCCAA  250

seq1  TCATGGATTCAAGTTGTGATTCTTCTCCAGTCCTGACCAATGATGATATA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGGATTCAAGTTGTGATTCTTCTCCAGTCCTGACCAATGATGATATA  300

seq1  AGCCACAATATTGCTGCTATTACTGAGGACTTTCTTCAAGGATATGGGTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCACAATATTGCTGCTATTACTGAGGACTTTCTTCAAGGATATGGGTT  350

seq1  ATTTGGAACAAGAGTTAAAAGCACAATTACCCCCCACGGGACCCTAAGAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGGAACAAGAGTTAAAAGCACAATTACCCCCCACGGGACCCTAAGAC  400

seq1  CTCTGGTGAGTGGAACACAGCGCCTGCCCCAATCCAATCGCGCGGAACCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGGTGAGTGGAACACAGCGCCTGCCCCAATCCAATCGCGCGGAACCT  450

seq1  GAGACTGTGGTACATAGGGAAGCAGGCTACCCGGGCCTGATCTGGGGCAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACTGTGGTACATAGGGAAGCAGGCTACCCGGGCCTGATCTGGGGCAC  500

seq1  AAGTCCCTTCCGCTCGACTCGAGACTCGAGCCCCGGGCTACCTTGCCAGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCCCTTCCGCTCGACTCGAGACTCGAGCCCCGGGCTACCTTGCCAGC  550

seq1  AGAGTCTTGCCCAACACCCCCAAGGGCCCACACGGGACTCCCCACGGGAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTCTTGCCCAACACCCCCAAGGGCCCACACGGGACTCCCCACGGGAT  600

seq1  CCTAAGACCTCTGGTGAGTGGAACACAGCGCCTGCCCCAATCCAATCGTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAAGACCTCTGGTGAGTGGAACACAGCGCCTGCCCCAATCCAATCGTG  650

seq1  CGGAACCTGAGACTGTGGTACATAGGGAAGCAGGCTACCCGGGCCTGATC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGAACCTGAGACTGTGGTACATAGGGAAGCAGGCTACCCGGGCCTGATC  700

seq1  TGGGGCACAAGTCCCTTCCGCTCGACTCGAGCCCCGGGCTACCTTGCCAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGCACAAGTCCCTTCCGCTCGACTCGAGCCCCGGGCTACCTTGCCAG  750

seq1  CTGAGTCGCCTGACACCCGCAAGGGCCCACACAGGATTCCACACGTGATC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGTCGCCTGACACCCGCAAGGGCCCACACAGGATTCCACACGTGATC  800

seq1  CTAAGACCTCTAGTGAGTGGAACACAACTTCTGCCAGGAGTCTGGTTCGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGACCTCTAGTGAGTGGAACACAACTTCTGCCAGGAGTCTGGTTCGA  850

seq1  ACACCAGATATCTGGGTACCTGCCTT  876
      ||||||||||||||||||| ||||||
seq2  ACACCAGATATCTGGGTACTTGCCTT  876