BAC Information

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BAC

Clone NameB6Ng01-167J05
Chromosome17 (Build37)
Map Location 68,579,433 - 68,580,149
singlet/doubletsinglet
Overlap genenone
Upstream genePtprm, Lrrc30, Lama1, Arhgap28
Downstream geneD930040M24Rik, EG622645, Epb4.1l3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-167J05.bB6Ng01-167J05.g
ACCDH959032DH959033
length7201,180
definitionDH959032|Mus musculus domesticus DNA, BAC clone: B6Ng01-167J05, 5' end.DH959033|Mus musculus domesticus DNA, BAC clone: B6Ng01-167J05, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctaactagcatccagtctatatatagaggatcagggaaagccaca
ctcaggccaggcaaggactttgacctatccatagatgaacaactagtaaa
aaaaaggctccaggagctcgagatgcctcacaagccccaagaattatgag
tcccaagaactcagtccacaattggccttaattctataaaacagaaattc
cttttgagtacctacatagtctttaacacgagccaggaaatatgccaaca
ttaaaatgatcagtgtgtttcttaaaatgttcagggaactacagttctta
gatgttatacttaactatataaaatgttatttaaaaatctacttctcact
agtgatgtgtgcgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtacat
tacctggatgtagaattagaccacggcttatctcagcactataatgttaa
tatatgttttcacacctgagaaaaataggccatcttcttaaaagatgagg
gtaagtctgaaagctgcctttcactcactgtggaacacttctcacagatg
tcctgtgtctttcagcattcacacgccctggctataggaagctgccagga
ttctgtttctcttttaaactgccagatgctgacttttaacagactcctct
taggaagctactgggtgctctttcctttactctggaattttgctatagaa
atcagctcatacacagttac
gaattcatcatgcaagtgaggaatgtgaaaaggattgacaagcaaacagc
cctgaccttcagctcagaaaatcatccatcaaagaacgaaggctactgtg
ccatcagaaggaagaggaagggaaagctggggacattcaaccaagactga
gacagccactcattgagtccattgatattaagatatatttttatttggaa
attgggtccattgatattaagaaatattaaggaaaagtaattgttgcttc
ctgttatttttgttgttagagttgggattctgttcttgttttttgaagga
ttactttcttgtttttttctaggacatacttctcctttttgtgttggagt
tttccctttattatcctttgaagggcttgattagtggaaagatattgtgt
gaatttggttttgtcatggaatactttggtttcttcatctatgataagtg
agagttttgctgggtatagtagcctgggctggcatttgtgttgtcttagg
gtctgtataacatctatgcaggatcttctggctttcatagtctctggtga
gaagtctggtataattctattaggtctgcctttatatgttacttgacctt
tttcccttaatgtttttactattttttaaagaaattttttatctttattt
agtgaatttgttgttctgattattatgtgtagggagaagtttcttttctg
gtccagtctatttggaattctataggctttttgtatgttcacggccatct
ctttctttaggttagggaagttttcttctataatttcgttgaagatattt
actcgccctttaagttgaaaatcttcattttcatcgatacctattatcct
taggtttggtcttctcattgtgtcctggatttcctggatgtttgagttag
gatcttttttgcattttgccttttctttgattgttgtgttcatgttttct
atggaattttatgcacctgagatttctctccatctcttgtattctgttgg
tgatgtcaccatctatgcctcctgattccttccctaggaattcatttcca
gaaatgtttctcttgggttcttaattgttcccccctcaatttgtaaggcc
gggtggccacatccatctccggttgtgtgttcgactctcttaggatctgt
gttccgctaaggaactccatgtgatacggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_68579433_68580149
seq2: B6Ng01-167J05.b_48_767

seq1  GAATTCTAACTAGCATCCAGTCTATATATAGAGGATCAGGGAAAGCCACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAACTAGCATCCAGTCTATATATAGAGGATCAGGGAAAGCCACA  50

seq1  CTCAGGCCAGGCAAGGACTTTGACCTATCCATAGATGAACAACTAGTAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGGCCAGGCAAGGACTTTGACCTATCCATAGATGAACAACTAGTAAA  100

seq1  AAAAAGGCTCCAGGAGCTCGAGATGCCTCACAAGCCCCAAGAATTATGAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAGGCTCCAGGAGCTCGAGATGCCTCACAAGCCCCAAGAATTATGAG  150

seq1  TCCCAAGAACTCAGTCCACAATTGGCCTTAATTCTATAAAACAGAAATTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAAGAACTCAGTCCACAATTGGCCTTAATTCTATAAAACAGAAATTC  200

seq1  CTTTTGAGTACCTACATAGTCTTTAACACGAGCCAGGAAATATGCCAACA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTGAGTACCTACATAGTCTTTAACACGAGCCAGGAAATATGCCAACA  250

seq1  TTAAAATGATCAGTGTGTTTCTTAAAATGTTCAGGGAACTACAGTTCTTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAATGATCAGTGTGTTTCTTAAAATGTTCAGGGAACTACAGTTCTTA  300

seq1  GATGTTATACTTAACTATATAAAATGTTATTTAAAAATCTACTTCTCACT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGTTATACTTAACTATATAAAATGTTATTTAAAAATCTACTTCTCACT  350

seq1  AGTGATGTGTGCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTACAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGATGTGTGCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTACAT  400

seq1  TACCTGGATGTAGAATTAGACCACGGCTTATCTCAGCACTATAATGTTAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCTGGATGTAGAATTAGACCACGGCTTATCTCAGCACTATAATGTTAA  450

seq1  TATATGTTTTCACACCTGAGAAAAATAGGCCATCTTCTTAAAAGATGAGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATGTTTTCACACCTGAGAAAAATAGGCCATCTTCTTAAAAGATGAGG  500

seq1  GTAAGTCTGAAAGCTGCC-TTCACTCACTGTGGAACACTTCTCACAGATG  549
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  GTAAGTCTGAAAGCTGCCTTTCACTCACTGTGGAACACTTCTCACAGATG  550

seq1  TCCTGTGTCTTTCAGCATTCACACGCCCTGGCTATAGGAAGCTGCCAGGA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGTGTCTTTCAGCATTCACACGCCCTGGCTATAGGAAGCTGCCAGGA  600

seq1  TTCTGTTTCTCTTTTAAACTGCCAGATGCTGAC-TTTAACAGACTCCTCT  648
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  TTCTGTTTCTCTTTTAAACTGCCAGATGCTGACTTTTAACAGACTCCTCT  650

seq1  TAGGAAGCTACTGGGTGCTCTTTCC-TTACCCTGGAA-TCTGCTATAGAA  696
      ||||||||||||||||||||||||| |||| |||||| | ||||||||||
seq2  TAGGAAGCTACTGGGTGCTCTTTCCTTTACTCTGGAATTTTGCTATAGAA  700

seq1  AACAGCTCATTACACAGTTAC  717
      | ||||||| |||||||||||
seq2  ATCAGCTCA-TACACAGTTAC  720