BAC Information

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BAC

Clone NameB6Ng01-168A13
Chromosome17 (Build37)
Map Location 60,733,651 - 60,734,838
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100043542, LOC100043549
Downstream geneLOC433129, EG620725
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-168A13.bB6Ng01-168A13.g
ACCDH959377DH959378
length1,2031,151
definitionDH959377|Mus musculus domesticus DNA, BAC clone: B6Ng01-168A13, 5' end.DH959378|Mus musculus domesticus DNA, BAC clone: B6Ng01-168A13, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttagaaagatgtgatttaaaatggggattactttaattgtaaa
tgttacatttgttcaccagacataattatcatctcaggggcttacgggta
aataaactcattgtttcttgttctttcagaattctggctggcaggttcaa
ctcagctattctggctcaaaccacactggtttaaactcattctctcagct
tcccagtgaattattctttttgtcctcaacttaaatctgttctaatcttc
tggctccttttaattctctgcgtctgcttacctgcctggcacagtctgca
caaattgaatatgactcaagaatgaactcaactgaatacaaccgtactat
atgatctgaattgccctgcaatcctaactcattctgcctgctctcaagta
gcttctctcttcaatgtgttctcatgaagttggacatattgtatttctca
ctcattctgtcaaatatttctctggttcttccctttgtctgctcctcaat
tagaattcgctatcagtgtggctgtttttttctacaaactaactttacct
tcattggttggtattaaaggtatatactaaaggcatgtctatatttcagc
ctaatcatactataatcctgggcatgtctgcattctgaccatatcatata
gacctataaggtcataggatgttatcccttgccagaacaatggtgttgtt
gaattaaaattccccaacaatcaatcactagtatcaaggttaataacgtc
cttcaaaattttccctttacttttatctatttttttgtaatttttgaata
caaggaattatatacaactgcaattattatgaggataaatagctatataa
cttattaataatttattcaaaacagacatctaatatcattatagaatatg
atctcagtgtctttctatgtacaagtatatttgaaaattgtctctagaag
gcagagtatacctttggtatatcttattgtaagatcattacactaaaacc
acagtagtatttgcttacatgattataatattactgagaaccctaatttt
acttatgaagtttagaaggaattttattccaataacatggctggcttctt
ggttaaggatacataatgcaagaacctcaccaggttctttgtgtatccaa
acggaactggcatatccttttatttttccttctgctaaattaccacatgc
cat
gaattctcacttgaggaatacggaatgtctgagaagcacctgaaaaaatg
ctcagcatccttaatcatcagagaaatgcaaatcaaaacaaccctgagat
tccatctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcaagaatgtggagaaagaggaacattccttcattattggtg
tgattgcaagcttgtacaaccactccggaaatcattctgttggttcctca
gaaaattggacttagtactaccagtggatcccgcaatacctctcctgggc
atatatccagaagatgtcccaaccggtaagtaggacacagctccactatg
ttcatagcagccttattcataatagccagaagctggaaagaacccagatg
cccctcaacagaggaatggatacaaaaaaatgtggtacatttacacaatg
gagtactactcagctattaaaaagaaaaaaaattatgaaattcctaggca
aatggttggacctggagggcatcatccttagttaggtaacacaatgacaa
aagaactcaaatgatatgtactcattgataaatggacattagcccagaaa
cttagtatacccgagatataagagacaatttgtaaaacacatgaaactga
agaagaacgaagaccaaagtgtggatactttaccccttcttataattgga
aacaattacccatgcaaggagttacagagacaaagtttggagctgagaca
aaaggatggaccatctagagactgctatatccaggtatctatcccataat
tagcctccaaaggataacatcattgcatacactagcaagtgtttgctgaa
aggaccctgatatagctgtctcttttgagactaggctggggcctagcaaa
cacagaagtggatgctcacagtcagctattggatggagcacagggcccca
atggaggagctagagaaagtatccaggagctaagggatctgcaccctgta
gtgcaataacattatgactaccagtacctgagctcttgactctagctgca
tttgtatcaaagatgctagtcgcatcactgaagaaggtcattggacacta
cttatatgccagttaggaacacagccaaagtgggaatgggtgtatggaat
g
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_60733651_60734838
seq2: B6Ng01-168A13.b_43_1245

seq1  GAATTCTTTAGAAAGATGTGATTTAAAATGGGGATTACTTTAATTGTAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTAGAAAGATGTGATTTAAAATGGGGATTACTTTAATTGTAAA  50

seq1  TGTTACATTTGTTCACCAGACATAATTATCATCTCAGGGGCTTACGGGTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTACATTTGTTCACCAGACATAATTATCATCTCAGGGGCTTACGGGTA  100

seq1  AATAAACTCATTGTTTCTTGTTCTTTCAGAATTCTGGCTGGCAGGTTCAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAACTCATTGTTTCTTGTTCTTTCAGAATTCTGGCTGGCAGGTTCAA  150

seq1  CTCAGCTATTCTGGCTCAAACCACACTGGTTTAAACTCATTCTCTCAGCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGCTATTCTGGCTCAAACCACACTGGTTTAAACTCATTCTCTCAGCT  200

seq1  TCCCAGTGAATTATTCTTTTTGTCCTCAACTTAAATCTGTTCTAATCTTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAGTGAATTATTCTTTTTGTCCTCAACTTAAATCTGTTCTAATCTTC  250

seq1  TGGCTCCTTTTAATTCTCTGCGTCTGCTTACCTGCCTGGCACAGTCTGCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTCCTTTTAATTCTCTGCGTCTGCTTACCTGCCTGGCACAGTCTGCA  300

seq1  CAAATTGAATATGACTCAAGAATGAACTCAACTGAATACAACCGTACTAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATTGAATATGACTCAAGAATGAACTCAACTGAATACAACCGTACTAT  350

seq1  ATGATCTGAATTGCCCTGCAATCCTAACTCATTCTGCCTGCTCTCAAGTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATCTGAATTGCCCTGCAATCCTAACTCATTCTGCCTGCTCTCAAGTA  400

seq1  GCTTCTCTCTTCAATGTGTTCTCATGAAGTTGGACATATTGTATTTCTCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCTCTCTTCAATGTGTTCTCATGAAGTTGGACATATTGTATTTCTCA  450

seq1  CTCATTCTGTCAAATATTTCTCTGGTTCTTCCCTTTGTCTGCTCCTCAAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATTCTGTCAAATATTTCTCTGGTTCTTCCCTTTGTCTGCTCCTCAAT  500

seq1  TAGAATTCGCTATCAGTGTGGCTGTTTTTTTCTACAAACTAACTTTACCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAATTCGCTATCAGTGTGGCTGTTTTTTTCTACAAACTAACTTTACCT  550

seq1  TCATTGGTTGGTATTAAAGGTATATACTAAAGGCATGTCTATATTTCAGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTGGTTGGTATTAAAGGTATATACTAAAGGCATGTCTATATTTCAGC  600

seq1  CTAATCATACTATAATCCTGGGCATGTCTGCATTCTGACCATATCATATA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATCATACTATAATCCTGGGCATGTCTGCATTCTGACCATATCATATA  650

seq1  GACCTATAAGGTCATAGGATGTTATCCCTTGCCAGAACAATGGTGTTGTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCTATAAGGTCATAGGATGTTATCCCTTGCCAGAACAATGGTGTTGTT  700

seq1  GAATTAAAATTCCCCAACAATCAATCACTAGTATCAAGGTTAATAACGTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTAAAATTCCCCAACAATCAATCACTAGTATCAAGGTTAATAACGTC  750

seq1  CTTCAAAATTTTCCCTTTACTTTTATCTATTTTTTTGTAATTTTTGAATA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCAAAATTTTCCCTTTACTTTTATCTATTTTTTTGTAATTTTTGAATA  800

seq1  CAAGGAATTATATACAACTGCAATTATTATGAGGATAAATAGCTATATAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGAATTATATACAACTGCAATTATTATGAGGATAAATAGCTATATAA  850

seq1  CTTATTAATAATTTATTCAAAACAGACATCTAATATCATTATAGAATATG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATTAATAATTTATTCAAAACAGACATCTAATATCATTATAGAATATG  900

seq1  ATCTCAGTGTCTTTCTATGTACAAGTATATTTGAAAATTGTCTCTAGAAG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCAGTGTCTTTCTATGTACAAGTATATTTGAAAATTGTCTCTAGAAG  950

seq1  GCAGAGTATAACCTTTGGTATATCTTATTGTAAGATCATTACACTAAAA-  999
      ||||||||| ||||||||||||||||||||||||||||||||||||||| 
seq2  GCAGAGTAT-ACCTTTGGTATATCTTATTGTAAGATCATTACACTAAAAC  999

seq1  CACAGTAGTATTTGCTTACATGATTATAATA-TACTGAG-ACACTAATGT  1047
      ||||||||||||||||||||||||||||||| ||||||| || ||||| |
seq2  CACAGTAGTATTTGCTTACATGATTATAATATTACTGAGAACCCTAATTT  1049

seq1  TACATATGAAGTGTAG-AGGAATTTTAATCCAATAACATGGCT-GCT--C  1093
      ||| |||||||| ||| |||||||||| ||||||||||||||| |||   
seq2  TACTTATGAAGTTTAGAAGGAATTTTATTCCAATAACATGGCTGGCTTCT  1099

seq1  TGGTTAGGGAT-CAT-ATGCAAAGACCTCA-CAGG-TCTGTGTG-ATCCA  1138
      |||||| |||| ||| ||||||  |||||| |||| ||| |||| |||||
seq2  TGGTTAAGGATACATAATGCAAGAACCTCACCAGGTTCTTTGTGTATCCA  1149

seq1  AACGG-ACTGGCATA-CCTT---TATTTCCTCTAGCTAAAATACACACAT  1183
      ||||| ||||||||| ||||   | ||||||   |||||| ||| |||||
seq2  AACGGAACTGGCATATCCTTTTATTTTTCCTTCTGCTAAATTAC-CACAT  1198

seq1  GCCAT  1188
      |||||
seq2  GCCAT  1203