BAC Information

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BAC

Clone NameB6Ng01-168B10
Chromosome17 (Build37)
Map Location 38,893,668 - 39,067,524
singlet/doubletdoublet
Overlap genenone
Upstream geneOlfr122, Olfr123, Olfr124, Olfr125, LOC672822, Olfr126, Olfr127, Olfr128, Ppia-ps17_697.1, Olfr761, Olfr1552-ps1, LOC100043265, Olfr129, Olfr130, Olfr131, Olfr132, Olfr133, Olfr134, Olfr135, Olfr138, Olfr137, Olfr762-ps1, Olfr136, LOC626985
Downstream geneLOC100043297, LOC100043300, EG668200, LOC672857, LOC627695
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-168B10.bB6Ng01-168B10.g
ACCDH959419DH959420
length1,160947
definitionDH959419|Mus musculus domesticus DNA, BAC clone: B6Ng01-168B10, 5' end.DH959420|Mus musculus domesticus DNA, BAC clone: B6Ng01-168B10, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(38,893,668 - 38,894,843)(39,066,565 - 39,067,524)
sequence
gaattcaatgaagtagagtcaattaaaaaatcaatgtagcagtttctcag
aaaattgtgaatataccttcctcaagactcacctataagactcctgggta
tacactcagagtgtatttttttttcataccacgtggaaactgctccactc
tgttcttagcatctttatgatttatagcagaaactggaaacaacctagat
atatgtcatatcgtgatatccatgccattagaatgagcccatgttttaaa
ctgcccggagatcctagagccagatattggatattccatagacccactat
agaaccaaatattattggaaaaatgaatgattgctaaatatattatgcat
tactcacagtttactatctagtccaactggttattagacatgcttcacac
aaaaacagatgacagcaatgcagagaccctaagaagatacaggcaatcaa
atatttcttatggtttgtagcatcttcaaaataaggaggaatgttggtaa
gaaccagataggtcaagagcaatgaaagaaagtgccaagaggataatatg
cccattacttattggaaatcacaagaactaaactgaaaataatgtagcat
tcatgggtttgacctagttcaattacatatatggtatggttgtgtagctt
attgctgttgtatgacttgtatcagggagcaggggaggtttctattctag
taagattcctatgggatcttttgccctattttgttagcttgtctagcctt
tgagaagtggtaccaatttattattcaagtttatataccatggctggtta
ataccaatcaaaattggcctactctgaagagaaaaggaggagtagtgttg
ggcacagatgtttgggtagctctagaaggacaggatgtaggggacactat
ggtcatgatgtaaaatattaaaaataaatcccactagaaattaaaatttt
cttttaattattcagtctttcagtgtagcacagtcacatgcaactcgagc
agattcagtttcacactattaaatactcattttcaatcatatagaattta
gtcatgatattctggctactacaatcgcttatcgttttcaactcttgctt
atttgcagcaatcagtttttctcaggtctgcaggctccactccactacag
ggttgtgtag
gaattcatttacatcatccattcatcttctgtttgtatggttaagtaaaa
gtatgcagtcataatggagagtataataagggtcacagtatttaagaaac
taggaggttattttattgggaaaaaactgaatactcactactttcaagta
tttgacaaaataaattttgaatgatagagtgaagtgtgcatttgtgtgtg
tgtgtgtgtgtgtgtgtgtgtacatgtccattgattaggccatgctaatg
agggtcacagtgtctgttatttggaggaacacataatagtgatatattta
agtcaatacatatattctacaagcattcaatatctttgggttcagttttt
aaaaacgtattgtctttgtggtcctcaagaattaaatttgcaactgaatt
ggaaatactttgtatataattgcaatcaaagagaacaagggaatcagtag
atgtagtgagttcttcctgagtctgtttcagaacctgagataaagataaa
ttaggattactgaatttacagtaaaaaaaaaaaataaaacttatccaatt
ttatttgtacagaatatataggattaaaataggttgggagctcaagacta
attctagacttctactatgcacttatctcctgtcagccaaaagtcaatga
gagtttaactcaagggaaacacaaaagagagttattttcctttagccctt
taacgggactatttcaaatatttggagcaaatttttctgggattttcaac
atccaaatttctgatattaacgcttaaaatatattttagtttattggaga
gaagtaattgatgtagttaatgttttgttttttgttttatttatggttag
tgatagaactgaattggaaagtcaagtagtactgtttcaaatgtttacgt
tatttggataataagttatgtggatatcaagctcaaactagacaatg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_38893668_38894843
seq2: B6Ng01-168B10.b_46_1205

seq1  GAATTCAATGAAGTAGAGTCAATTAAAAAATCAATGTAGCAGTTTCTCAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAATGAAGTAGAGTCAATTAAAAAATCAATGTAGCAGTTTCTCAG  50

seq1  AAAATTGTGAATATACCTTCCTCAAGACTCACCTATAAGACTCCTGGGTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATTGTGAATATACCTTCCTCAAGACTCACCTATAAGACTCCTGGGTA  100

seq1  TACACTCAGAGTGTATTTTTTTTTCATACCACGTGGAAACTGCTCCACTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACTCAGAGTGTATTTTTTTTTCATACCACGTGGAAACTGCTCCACTC  150

seq1  TGTTCTTAGCATCTTTATGATTTATAGCAGAAACTGGAAACAACCTAGAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCTTAGCATCTTTATGATTTATAGCAGAAACTGGAAACAACCTAGAT  200

seq1  ATATGTCATATCGTGATATCCATGCCATTAGAATGAGCCCATGTTTTAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGTCATATCGTGATATCCATGCCATTAGAATGAGCCCATGTTTTAAA  250

seq1  CTGCCCGGAGATCCTAGAGCCAGATATTGGATATTCCATAGACCCACTAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCCGGAGATCCTAGAGCCAGATATTGGATATTCCATAGACCCACTAT  300

seq1  AGAACCAAATATTATTGGAAAAATGAATGATTGCTAAATATATTATGCAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACCAAATATTATTGGAAAAATGAATGATTGCTAAATATATTATGCAT  350

seq1  TACTCACAGTTTACTATCTAGTCCAACTGGTTATTAGACATGCTTCACAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTCACAGTTTACTATCTAGTCCAACTGGTTATTAGACATGCTTCACAC  400

seq1  AAAAACAGATGACAGCAATGCAGAGACCCTAAGAAGATACAGGCAATCAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAACAGATGACAGCAATGCAGAGACCCTAAGAAGATACAGGCAATCAA  450

seq1  ATATTTCTTATGGTTTGTAGCATCTTCAAAATAAGGAGGAATGTTGGTAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTCTTATGGTTTGTAGCATCTTCAAAATAAGGAGGAATGTTGGTAA  500

seq1  GAACCAGATAGGTCAAGAGCAATGAAAGAAAGTGCCAAGAGGATAATATG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACCAGATAGGTCAAGAGCAATGAAAGAAAGTGCCAAGAGGATAATATG  550

seq1  CCCATTACTTATTGGAAATCACAAGAACTAAACTGAAAATAATGTAGCAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATTACTTATTGGAAATCACAAGAACTAAACTGAAAATAATGTAGCAT  600

seq1  TCATGGGTTTGACCTAGTTCAATTACATATATGGTATGGTTGTGTAGCTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGGGTTTGACCTAGTTCAATTACATATATGGTATGGTTGTGTAGCTT  650

seq1  ATTGCTGTTGTATGACTTGTATCAGGGAGCAGGGGAGGTTTCTATTCTAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGCTGTTGTATGACTTGTATCAGGGAGCAGGGGAGGTTTCTATTCTAG  700

seq1  TAAGATTCCTATGGGATCTTTTGCCCTATTTTGTTAGCTTGTCTAGCCTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGATTCCTATGGGATCTTTTGCCCTATTTTGTTAGCTTGTCTAGCCTT  750

seq1  TGAGAAGTGGTACCAATTTATTATTCAAGTTTATATACCATGGCTGGTTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGAAGTGGTACCAATTTATTATTCAAGTTTATATACCATGGCTGGTTA  800

seq1  ATACCAATCAAAATTGGCCTACTCTGAAGAGAAAAGGAGGAGTAGTGTTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACCAATCAAAATTGGCCTACTCTGAAGAGAAAAGGAGGAGTAGTGTTG  850

seq1  GGCACAGATG-TTGGGTAGCTCTAGAAGGACAGGATGTAGGGGACACTAT  899
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  GGCACAGATGTTTGGGTAGCTCTAGAAGGACAGGATGTAGGGGACACTAT  900

seq1  GGTCATGATGTAAAATATTAAAAATAAAATCCCACTAGAAATTAAAATTT  949
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  GGTCATGATGTAAAATATTAAAAAT-AAATCCCACTAGAAATTAAAATTT  949

seq1  TCTTTTAATTATTCAGTCTTTCAGGTGTAGCACAGTCACAATGCAACTCG  999
      ||||||||||||||||||||||| ||||||||||||||| ||||||||||
seq2  TCTTTTAATTATTCAGTCTTTCA-GTGTAGCACAGTCAC-ATGCAACTCG  997

seq1  AGCAGATTCAAGTTTCAACACTATTAATTACTCAATTTTCAATCATATAG  1049
      ||||||||| |||||| |||||||||| ||||| ||||||||||||||||
seq2  AGCAGATTC-AGTTTC-ACACTATTAAATACTC-ATTTTCAATCATATAG  1044

seq1  AATTTAGTCATGATATTCTGGGCTACTACAAATCGCTTTTATCGTTTTTC  1099
      ||||||||||||||||||| ||||||||| ||||||  ||||||||||  
seq2  AATTTAGTCATGATATTCT-GGCTACTAC-AATCGC--TTATCGTTTT--  1088

seq1  CAACTC-TGC-TATTTGCAGCACATTCAGTTTTTCTCCAAGGTTCTGGCA  1147
      |||||| ||| |||||||||  || ||||||||||||  ||| ||| |||
seq2  CAACTCTTGCTTATTTGCAG--CAATCAGTTTTTCTC--AGG-TCT-GCA  1132

seq1  GGCTCCACTCCACTACAGGTGTTGTGTAG  1176
      ||||||||||||||||||| |||||||||
seq2  GGCTCCACTCCACTACAGG-GTTGTGTAG  1160

seq1: chr17_39066565_39067524
seq2: B6Ng01-168B10.g_67_1013 (reverse)

seq1  CATTGTTCTAGTCTCTGAGCTTGATCTCCACATACATATTTCTACAAATA  50
      ||||| |||||  | |||||||||| ||||||||  |  || | ||||||
seq2  CATTG-TCTAG--TTTGAGCTTGATATCCACATAACTTATTATCCAAATA  47

seq1  ACGTATACATTTGAACCAGTACTACTTGGCTTT-CAATTCAGTTACTATC  99
      ||||| ||||||||| |||||||||||| |||| |||||||||| |||||
seq2  ACGTAAACATTTGAAACAGTACTACTTGACTTTCCAATTCAGTT-CTATC  96

seq1  ACTAA-CATAAATAAAAC-AAAAACAAAACATTAACTACATCAATTTACT  147
      ||||| |||||||||||| ||||||||||||||||||||||||| |||||
seq2  ACTAACCATAAATAAAACAAAAAACAAAACATTAACTACATCAA-TTACT  145

seq1  TCTCTTCAATAAACTAAAATATATTTT-AGCGTTAATATCAGAAATTTGG  196
      ||||| ||||||||||||||||||||| ||||||||||||||||||||||
seq2  TCTCTCCAATAAACTAAAATATATTTTAAGCGTTAATATCAGAAATTTGG  195

seq1  ATGTTGAAAATCCCAGAAAAATTTGCTCCAAATATTTGAAATAGTCCCGT  246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTGAAAATCCCAGAAAAATTTGCTCCAAATATTTGAAATAGTCCCGT  245

seq1  TAAAGGGCTAA--GGAAATAACTCTCTTTTGTGTTTCCCTTTGAGTTAAA  294
      |||||||||||  | |||||||||||||||||||||||| ||||||||||
seq2  TAAAGGGCTAAAGGAAAATAACTCTCTTTTGTGTTTCCC-TTGAGTTAAA  294

seq1  CTCTCATTGAC-TTTGGCTGACAGGAGATAAGTGCATAGTAGAAGTCTAG  343
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  CTCTCATTGACTTTTGGCTGACAGGAGATAAGTGCATAGTAGAAGTCTAG  344

seq1  AATTAGTCTTGAGCTCCCAACCTATTTTAATCCTATATATTCTGTACAAA  393
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAGTCTTGAGCTCCCAACCTATTTTAATCCTATATATTCTGTACAAA  394

seq1  TAAAATTGGATAAGTTTTATTTTTTTTTTTTACTGTAAATTCAGTAATCC  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATTGGATAAGTTTTATTTTTTTTTTTTACTGTAAATTCAGTAATCC  444

seq1  TAATTTATCTTTATCTCAGGTTCTGAAACAGACTCAGGAAGAACTCACTA  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTTATCTTTATCTCAGGTTCTGAAACAGACTCAGGAAGAACTCACTA  494

seq1  CATCTACTGATTCCCTTGTTCTCTTTGATTGCAATTATATACAAAGTATT  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTACTGATTCCCTTGTTCTCTTTGATTGCAATTATATACAAAGTATT  544

seq1  TCCAATTCAGTTGCAAATTTAATTCTTGAGGACCACAAAGACAATACGTT  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAATTCAGTTGCAAATTTAATTCTTGAGGACCACAAAGACAATACGTT  594

seq1  TTTAAAAACTGAACCCAAAGATATTGAATGCTTGTAGAATATATGTATTG  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAAAACTGAACCCAAAGATATTGAATGCTTGTAGAATATATGTATTG  644

seq1  ACTTAAATATATCACTATTATGTGTTCCTCCAAATAACAGACACTGTGAC  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTAAATATATCACTATTATGTGTTCCTCCAAATAACAGACACTGTGAC  694

seq1  CCTCATTAGCATGGCCTAATCAATGGACATGTATTTGGAAAAACACACAC  743
      ||||||||||||||||||||||||||||||||              ||||
seq2  CCTCATTAGCATGGCCTAATCAATGGACATGT--------------ACAC  730

seq1  ACACACACACACACACACACACACAAATGCACACTTCACTCTATCATTCA  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACACACACACACACACACACAAATGCACACTTCACTCTATCATTCA  780

seq1  AAATTTATTTTGTCAAATACTTGAAAGTAGTGAGTATTCAGTTTTTTCCC  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTTATTTTGTCAAATACTTGAAAGTAGTGAGTATTCAGTTTTTTCCC  830

seq1  AATAAAATAACCTCCTAGTTTCTTAAATACTGTGACCCTTATTATACTCT  893
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAAATAACCTCCTAGTTTCTTAAATACTGTGACCCTTATTATACTCT  880

seq1  CCATTATGACTGCATACTTTTACTTAACCATACAAACAGAAGATGAATGG  943
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTATGACTGCATACTTTTACTTAACCATACAAACAGAAGATGAATGG  930

seq1  ATGATGTAAATGAATTC  960
      |||||||||||||||||
seq2  ATGATGTAAATGAATTC  947