BAC Information

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BAC

Clone NameB6Ng01-169I23
Chromosome17 (Build37)
Map Location 38,725,467 - 38,826,284
singlet/doubletdoublet
Overlap genenone
Upstream geneOlfr114, Olfr115, Olfr116, Olfr117, Olfr118, Olfr119, Scocp, Olfr120, Olfr1558-ps1, Olfr121, Olfr122, Olfr123, Olfr124, Olfr125, LOC672822, Olfr126, Olfr127, Olfr128, Ppia-ps17_697.1, Olfr761, Olfr1552-ps1, LOC100043265, Olfr129, Olfr130, Olfr131, Olfr132, Olfr133, Olfr134, Olfr135, Olfr138, Olfr137, Olfr762-ps1, Olfr136, LOC626985
Downstream geneLOC100043297, LOC100043300, EG668200
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-169I23.bB6Ng01-169I23.g
ACCDH960507DH960508
length1,052994
definitionDH960507|Mus musculus domesticus DNA, BAC clone: B6Ng01-169I23, 5' end.DH960508|Mus musculus domesticus DNA, BAC clone: B6Ng01-169I23, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(38,825,761 - 38,826,284)(38,725,467 - 38,726,091)
sequence
gaattctgtggttgcttatgtatactataatatgatgtacaaatagtgat
ggcatgattccttcttttccaatttgcatcccatttatatcattgagttg
tgtaattgatcttgctaaagcttcaagaaatatgttgaataaacagaaac
aaaatatggtactttttcttatctctgctttagtggtattgctttaagat
tttattacatttaatgtaatggtggcaattggcttgatgtattttgattt
tattatgtttaggaatgccccttgtgtcattgttcaaagacttttaagat
gtaaagtggttagtatttctcaaagattctttcgtcatctgataagatga
tcatgtgttttttgttttgttttgttttgtttttgtttttcagtttgttt
acatggtagattatattgatggaatttttgtatattaaaacacccttgaa
ggcctgtggtgaatccttattgatcattatggatggggatttaatgtgtt
ctagaattcagtcaatgagaattttttcattgagtatttttacatgtata
tgtgcataacaaaattggtctgaagttcttgttctttttccaaggcaaaa
ctttggactgaagttcaggacccttatgaaattgttagggaaagactgaa
ggaaatgaataggatgacaacatcataggcagaccaaaagtgttaattaa
cctgcacccctgggagattcccggaatggaaccaccgacaaagaagcaag
cataggttagtccaaggtctctaacacatttgtaccataagactgccttg
tctggcctcagtgggagaggatgtgtcaaaatctgtagggactcaatacc
ccaggaaggagagattcttggtgagcatcctctcactgttgaaggtaagt
ttgtgaggaaaatctacctgagcatatcagatgcaataatttaataatta
tagtaataaaacatgtataaataagagtttctcctctaggtttttttatt
tttttaactcctgtaatacctggggaatagcatatatctactgtacgtca
aa
gaattctttgtttagctctgagccccatttttaatggggttatttgattt
tctgtagtccaacttcttgagttctctctatatattgcatattaatccct
tatctgattgttttgtttttttaatatataatcctcctcaatgaaagaat
ttctggagatgtaatcatctgtcccctcaggatgtacttcagagcattag
taaaaatttgaggttttggtacagaaacagagagattaagcaacggaatt
gaatgaagactaacaaatgaacccacacccctaacctatgcacccttgat
ttttgacaaaagggacaaaccatacaatggaaaaataaaaacataatcag
caaatggtactactttaactagaggtctgcatgtagaagattgagagtag
atccatgctttttaccccagccaaaacttaagtccaattggatcaaatac
cacaaaataaaaccattacactaaatataatggaagagaagatagggaaa
agccttgaatgaattgatacaggagatgatttcttgaacacaataccaat
ggttcaggctctgtgaacaataattgtcaaattaaatctcatacaagtga
aaagtcactttaaagaaaatgataccaatgataggaacaaacaaatgctc
acatattgggaaaatatgttcactaagctgacaaaggaataaaaggaaaa
aatgaaactgctcaagaaagtacaaaccaacaaaactgataaaccaatta
aaaatgggaaacagagataaacagagaattctcaacaaagcaattactgt
tgggcaagaagcattagtaaaaatgtaccagggaaacacaaataaaataa
ttctgggatttagtcttaacactctcagaattgctaagatgaaaaactca
gagacagtatatggtggagaggatttagacatagtatactttccatgttt
agtgcgaatgtgagtttgtaaaactcgtttggatatcattttgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_38825761_38826284
seq2: B6Ng01-169I23.b_587_1097 (reverse)

seq1  TTTGACGTTACAGTAGATATATGCTATTACCCCAGGTAATTACATGAGTA  50
      ||||||| |||||||||||||||||||| |||||||| |||||| |||| 
seq2  TTTGACG-TACAGTAGATATATGCTATT-CCCCAGGT-ATTACAGGAGTT  47

seq1  AAAAAAATAAAAAAATACCTAGAGGAGAAAACTTCTTATTTATACATGTT  100
      ||||||||||||||  ||||||||||||||   |||||||||||||||||
seq2  AAAAAAATAAAAAA--ACCTAGAGGAGAAA--CTCTTATTTATACATGTT  93

seq1  TTATTACTATTAATTATTAAATTTATTTGCATCCTGATATGCTCAGGTAG  150
      ||||||||| |||||||||||||   |||||| |||||||||||||||||
seq2  TTATTACTA-TAATTATTAAATT--ATTGCAT-CTGATATGCTCAGGTAG  139

seq1  ATTTTTCCTCACAAACCTTACCTTCAACAGTGAGAGGATGCTCACCAAGA  200
      | ||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  A-TTTTCCTCACAAA-CTTACCTTCAACAGTGAGAGGATGCTCACCAAGA  187

seq1  ATCTCTCCTTCCTGGGGTATTGAGTCCCTACAGATTTTGACACATCCTCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCTCCTTCCTGGGGTATTGAGTCCCTACAGATTTTGACACATCCTCT  237

seq1  CCCACTGAGGCCAGACAAGGCAGTCTTATGGTACAAATGTGTTAGAGACC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACTGAGGCCAGACAAGGCAGTCTTATGGTACAAATGTGTTAGAGACC  287

seq1  TTGGACTAACCTATGCTTGCTTCTTTGTCGGTGGTTCCATTCCGGGAATC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGACTAACCTATGCTTGCTTCTTTGTCGGTGGTTCCATTCCGGGAATC  337

seq1  TCCCAGGGGTGCAGGTTAATTAACACTTTTGGTCTGCCTATGATGTTGTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAGGGGTGCAGGTTAATTAACACTTTTGGTCTGCCTATGATGTTGTC  387

seq1  ATCCTATTCATTTCCTTCAGTCTTTCCCTAACAATTTCATAAGGGTCCTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTATTCATTTCCTTCAGTCTTTCCCTAACAATTTCATAAGGGTCCTG  437

seq1  AACTTCAGTCCAAAGTTTTGCCTTGGAAAAAGAACAAGAACTTCAGACCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTCAGTCCAAAGTTTTGCCTTGGAAAAAGAACAAGAACTTCAGACCA  487

seq1  ATTTTGTTATGCACATATACATGT  524
      ||||||||||||||||||||||||
seq2  ATTTTGTTATGCACATATACATGT  511

seq1: chr17_38725467_38726091
seq2: B6Ng01-169I23.g_68_692

seq1  GAATTCTTTGTTTAGCTCTGAGCCCCATTTTTAATGGGGTTATTTGATTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTGTTTAGCTCTGAGCCCCATTTTTAATGGGGTTATTTGATTT  50

seq1  TCTGTAGTCCAACTTCTTGAGTTCTCTCTATATATTGCATATTAATCCCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTAGTCCAACTTCTTGAGTTCTCTCTATATATTGCATATTAATCCCT  100

seq1  TATCTGATTGTTTTGTTTTTTTAATATATAATCCTCCTCAATGAAAGAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTGATTGTTTTGTTTTTTTAATATATAATCCTCCTCAATGAAAGAAT  150

seq1  TTCTGGAGATGTAATCATCTGTCCCCTCAGGATGTACTTCAGAGCATTAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGGAGATGTAATCATCTGTCCCCTCAGGATGTACTTCAGAGCATTAG  200

seq1  TAAAAATTTGAGGTTTTGGTACAGAAACAGAGAGATTAAGCAACGGAATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAATTTGAGGTTTTGGTACAGAAACAGAGAGATTAAGCAACGGAATT  250

seq1  GAATGAAGACTAACAAATGAACCCACACCCCTAACCTATGCACCCTTGAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGAAGACTAACAAATGAACCCACACCCCTAACCTATGCACCCTTGAT  300

seq1  TTTTGACAAAAGGGACAAACCATACAATGGAAAAATAAAAACATAATCAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGACAAAAGGGACAAACCATACAATGGAAAAATAAAAACATAATCAG  350

seq1  CAAATGGTACTACTTTAACTAGAGGTCTGCATGTAGAAGATTGAGAGTAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATGGTACTACTTTAACTAGAGGTCTGCATGTAGAAGATTGAGAGTAG  400

seq1  ATCCATGCTTTTTACCCCAGCCAAAACTTAAGTCCAATTGGATCAAATAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCATGCTTTTTACCCCAGCCAAAACTTAAGTCCAATTGGATCAAATAC  450

seq1  CACAAAATAAAACCATTACACTAAATATAATGGAAGAGAAGATAGGGAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAAAATAAAACCATTACACTAAATATAATGGAAGAGAAGATAGGGAAA  500

seq1  AGCCTTGAATGAATTGATACAGGAGATGATTTCTTGAACACAATACCAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTTGAATGAATTGATACAGGAGATGATTTCTTGAACACAATACCAAT  550

seq1  GGTTCAGGCTCTGTGAACAATAATTGTCAAATTAAATCTCATACAAGTGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTCAGGCTCTGTGAACAATAATTGTCAAATTAAATCTCATACAAGTGA  600

seq1  AAAGTCACTTTAAAGAAAATGATAC  625
      |||||||||||||||||||||||||
seq2  AAAGTCACTTTAAAGAAAATGATAC  625