BAC Information

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BAC

Clone NameB6Ng01-172F12
Chromosome17 (Build37)
Map Location 93,285,374 - 93,286,594
singlet/doubletsinglet
Overlap genenone
Upstream geneEG640442, LOC627395, LOC676141, LOC668877
Downstream geneLOC100043746, LOC100043747, LOC100043748, LOC100043907, Adcyap1, LOC676157, LOC627503
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-172F12.bB6Ng01-172F12.g
ACCGA000988GA000989
length1,2261,185
definitionB6Ng01-172F12.b B6Ng01-172F12.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccacatgattataggctgtgagctgcctaacatgggagatggaaa
ttgaacttgggtatatgtactgaaagagcaatactaaggatcagcaactc
ctaactgctcagctgactgtctttgtagccctgtgtgtgctcttgttaaa
aatcaccattaattcttttctgtaaaggcataggtatatttaattttttc
atatggcctggactatacaacataattaattatatgtgaattccaagagt
agatgttaaagaaataattaccttctatagagttgcttaaccttagaacc
taatagcaatacttggcaaaatttaagtatctgtgtgtgtgaaatatatg
taagggcagtctaactggtacagtcagctttattcccggatccctgttta
cgttttagatctataaatacaaaagatatagttaagtgaagatattacat
tatggctttgcattctttatagtaatacttaaccacaatatctatcacaa
aataccatattatctgctcttgtttattaaatataagaaaataaatacta
taaggacaattttccctttggttaattttctattgtaattattcattgaa
cttactccaagctattaaaattgatttaatatcttcaactcctactattg
aaattatgttccagaaaccagcacttgtttcctgttccttgtttaagttt
tagatctataaattgaattgaaccctaattctaataagacccagtactga
atcttattcatattaaagcctgagagttattaatacagatgtattaattg
attaattgcagccgttgtacagcgaccatgattaattatatatgttgtcc
agtctaagaaaaccattagctcttttgtcacatatagaaactatattctg
gtcttcacagatagaaatgtttaatgcagtaggatactgcttgaattttc
atggaaaaattcatgagaaataaaaatcttcaaaagcctcttgtgtcttc
tttcaagatgaatggaagtcttggccgtggtgacccaacatgatctgaca
gatgtaatatgtaaggtggatgagaggaagaagaacaaaagagcattttc
acaagtacctgaattgtaggtttagcagaaagcttgtttttggccaggtt
ggcagcattccattccgtccaacatgtttttggatcacgtttagcattcc
aaaattgtagcatatgcgctagctgg

gaattcttaactgaggaataatgaatggctgagaagcatataaagcaatg
ttcaacattcttagtcatcagggaaatgcaaatcaaaacgagtctgagat
tccacttcacaccagtcagactgactaagattaaaaattcaggtgacaac
agatgctggtgaggatggagacaaaaaggaaaagtcttccactgtttgga
tagcaagcttggaccactactgtggaattcagtctggctgttccttagaa
aattggacacagtactacctgacaatacagttagaccacttctgggttca
tatacccagaagatgctccaaaatattacaaggacacataaaagccagaa
cctggaaagaacccagatttccttcaacagaggaatatatacagaaattg
tggtacatttacacaatggagtacaacccacctatcaaaaacaatgattt
tatgaaattcttaggcaaatggatgtatctggaggatattatcctgagtg
aggtaaccctgtcacaaaagaacacacatagtatacactcactgataagt
ggatcttagtccaaaggctcagcatacccaagatacaatttacaaaccac
atgaagctcaagaagaaggaagaccaaagtgtggatgttccagtccttag
aagggggaagaaaatcctcaagggaggaaatatatggagacaaatgtgga
acagagactgtaggaaaggctaaccagagactgccccacttggagatcta
tcccatatacagacaccatacccagcactattgtggctgccaataagttc
ttgctgacaagagcctgatactgtctcctgaaagggtctgccagagcctg
agtaatacagaggcaggtgcttgcagccaaccattgggactaagcactgg
gtccccagtggaggagttagagaaaggactgaaggagatgaaaggggtgt
gcaaccccataggaagaacaatgatatcacccaaccattcctccagaatt
cctagagactaactacacaaacatacatatggaggacccaatgctcttag
cagcatgtaatagcagagatgacctggtgtcatcatgggaggagaatgac
ttggtctggagcctaaatccaagtgtaagaattcagctaaggaattgcac
gtggttgtctggccgtcgacgatctcgctgtatac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_93285374_93286594
seq2: B6Ng01-172F12.b_34_1259

seq1  GAATTCCACATGATTATAGGCTGTGAGCTGCCTAACATGGGAGATGGAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCACATGATTATAGGCTGTGAGCTGCCTAACATGGGAGATGGAAA  50

seq1  TTGAACTTGGGTATATGTACTGAAAGAGCAATACTAAGGATCAGCAACTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAACTTGGGTATATGTACTGAAAGAGCAATACTAAGGATCAGCAACTC  100

seq1  CTAACTGCTCAGCTGACTGTCTTTGTAGCCCTGTGTGTGCTCTTGTTAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAACTGCTCAGCTGACTGTCTTTGTAGCCCTGTGTGTGCTCTTGTTAAA  150

seq1  AATCACCATTAATTCTTTTCTGTAAAGGCATAGGTATATTTAATTTTTTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCACCATTAATTCTTTTCTGTAAAGGCATAGGTATATTTAATTTTTTC  200

seq1  ATATGGCCTGGACTATACAACATAATTAATTATATGTGAATTCCAAGAGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGGCCTGGACTATACAACATAATTAATTATATGTGAATTCCAAGAGT  250

seq1  AGATGTTAAAGAAATAATTACCTTCTATAGAGTTGCTTAACCTTAGAACC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGTTAAAGAAATAATTACCTTCTATAGAGTTGCTTAACCTTAGAACC  300

seq1  TAATAGCAATACTTGGCAAAATTTAAGTATCTGTGTGTGTGAAATATATG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATAGCAATACTTGGCAAAATTTAAGTATCTGTGTGTGTGAAATATATG  350

seq1  TAAGGGCAGTCTAACTGGTACAGTCAGCTTTATTCCCGGATCCCTGTTTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGGGCAGTCTAACTGGTACAGTCAGCTTTATTCCCGGATCCCTGTTTA  400

seq1  CGTTTTAGATCTATAAATACAAAAGATATAGTTAAGTGAAGATATTACAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTTTTAGATCTATAAATACAAAAGATATAGTTAAGTGAAGATATTACAT  450

seq1  TATGGCTTTGCATTCTTTATAGTAATACTTAACCACAATATCTATCACAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGGCTTTGCATTCTTTATAGTAATACTTAACCACAATATCTATCACAA  500

seq1  AATACCATATTATCTGCTCTTGTTTATTAAATATAAGAAAATAAATACTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACCATATTATCTGCTCTTGTTTATTAAATATAAGAAAATAAATACTA  550

seq1  TAAGGACAATTTTCCCTTTGGTTAATTTTCTATTGTAATTATTCATTGAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGGACAATTTTCCCTTTGGTTAATTTTCTATTGTAATTATTCATTGAA  600

seq1  CTTACTCCAAGCTATTAAAATTGATTTAATATCTTCAACTCCTACTATTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTACTCCAAGCTATTAAAATTGATTTAATATCTTCAACTCCTACTATTG  650

seq1  AAATTATGTTCCAGAAACCAGCACTTGTTTCCTGTTCCTTGTTTAAGTTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTATGTTCCAGAAACCAGCACTTGTTTCCTGTTCCTTGTTTAAGTTT  700

seq1  TAGATCTATAAATTGAATTGAACCCTAATTCTAATAAGACCCAGTACTGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATCTATAAATTGAATTGAACCCTAATTCTAATAAGACCCAGTACTGA  750

seq1  ATCTTATTCATATTAAAGCCTGAGAGTTATTAATACAGATGTATTAATTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTATTCATATTAAAGCCTGAGAGTTATTAATACAGATGTATTAATTG  800

seq1  ATTAATTGCAGCCGTTGTACAGCGACCATGATTAATTATATATGTTGTCC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAATTGCAGCCGTTGTACAGCGACCATGATTAATTATATATGTTGTCC  850

seq1  AGTCTAAGAAAACCATTAGCTCTTTTGTCACATATAGAAACTATATTCTG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTAAGAAAACCATTAGCTCTTTTGTCACATATAGAAACTATATTCTG  900

seq1  GTCTTCACAGATAGAAATG-TTAATGCAGTAGGATACTGCTTGAATTTTC  949
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  GTCTTCACAGATAGAAATGTTTAATGCAGTAGGATACTGCTTGAATTTTC  950

seq1  ATTGGAAAATTCATGAGAAATAAAAATCTTCAAAAG-CTC-TGTGTC-TC  996
      || | ||||||||||||||||||||||||||||||| ||| |||||| ||
seq2  ATGGAAAAATTCATGAGAAATAAAAATCTTCAAAAGCCTCTTGTGTCTTC  1000

seq1  TTTCAAGATGAATGGAAGTC-TGGCCGTGGTGACCCAACATGATCTGACA  1045
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  TTTCAAGATGAATGGAAGTCTTGGCCGTGGTGACCCAACATGATCTGACA  1050

seq1  GATGGTATATGTTAGGTGGATGAGAGGAAG-AGAACAAAAAGAGCA-TTT  1093
      ||||  |||||| ||||||||||||||||| ||||| ||||||||| |||
seq2  GATGTAATATGTAAGGTGGATGAGAGGAAGAAGAAC-AAAAGAGCATTTT  1099

seq1  CA-AAGTACCTG-ATTGTAGGTTTAGCAGAAAGCTGTCTTTGGGCCAGTT  1141
      || ||||||||| ||||||||||||||||||||||   ||| |||||| |
seq2  CACAAGTACCTGAATTGTAGGTTTAGCAGAAAGCTTGTTTTTGGCCAGGT  1149

seq1  TTGCAGCATTCAATCCCTTCC-ACATGTTTTTGAATCAAGGGTTCAGCAT  1190
      | ||||||||| || || ||| ||||||||||| ||||   ||| |||||
seq2  TGGCAGCATTCCATTCCGTCCAACATGTTTTTGGATCA--CGTTTAGCAT  1197

seq1  TCCAAAATTTTGTAGGTAATTGGCTAGCTGG  1221
      |||||||  ||||||   ||  |||||||||
seq2  TCCAAAA--TTGTAGCATATGCGCTAGCTGG  1226


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