BAC Information

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BAC

Clone NameB6Ng01-172K14
Chromosome17 (Build37)
Map Location 21,691,900 - 21,800,147
singlet/doubletdoublet
Overlap geneZfp52, BC049807
Upstream geneEG627814, EG381065, EG224582, Fpr-rs3, EG433073, V1re2, V1re6, LOC100041976, V1re3, V1re1, V1re8, V1re7, V1re4, LOC627884, Ppp2r1a, V1rf5, Zfp160, LOC627912, LOC435509, EG627924, 4933430A09, EG665654, EG665662, LOC665666, EG665669, V1rf1, V1rf2, V1rf4, V1rf3, A830058L05Rik, Zfp54, Zfp51, Zfp53, LOC100042508
Downstream geneZfp760, BC043476, 4930515G13Rik, 2610036F08Rik, LOC624960, 3110048L19Rik, 4930432O21Rik, LOC665820, LOC665825, LOC674332, LOC631010, EG665844, EG210853, LOC671007, EG240038, EG631624, 6330416L07Rik, Zfp758, 1300003B13Rik, EG210876, LOC100042656, EG628185
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-172K14.bB6Ng01-172K14.g
ACCGA001219GA001220
length1,109961
definitionB6Ng01-172K14.b B6Ng01-172K14.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(21,691,900 - 21,693,012)(21,799,521 - 21,800,147)
sequence
gaattcagtattaattttactttttctctttgaccccttggtactaaaga
ccacaatctggctattcattgttattcaaagagaaaatcaaagaagagaa
acaggaagaaatggccaattctccagtaaacacatcccaggtcagtggtc
atgtccactttcattctgaaaatattatagtttgatatattgcaaacctt
aaattttctgcttctgatgatgttttaaaaatttatctttatgaactgat
tcaccaccaaaccccaaaaacctgtgaaggaattagaacaagaaaagcaa
ttacctttatgtcctttttcataatgagtggtcattacatccatgaaacg
gatgatcttgagtgtagactgagattatattctacttgtctttctcttcg
gtatttaaatcatgatggtggtgatgtgtctacatgtgtgttggcacttc
atatctctttatcccaggagaattacaatcttggttatttctgaaagtag
agagatcagtatttttactccttttcatttactcttttttgtgtcccaca
tgcatacacttgggcttggactcattgtgtagaattatgtggaattcatc
catacaaatgtcttgtgggcattgactgacatgtgcataagctgttattt
gatgcagagaaactatcccctcattatggccttgctctagacactttgaa
tgtcagcactccatgcctaccctgcagttgcagtgtactgaaattgatat
tgttctatgttggctcttctatatgcttagaacaagtttagattttatta
agtgtatcttatgcagattttcttatctgcttgttagtggcccaaatagt
cttataaaaattaatttggtaggctacttgatttttatgttacaattaaa
cttgtgagtatgtagcattactacaatccttgttactgtggcaaaatatc
aaaatgctttgcttaaaagtcaatgggttctgccttccatatctacccct
ttgctatttaatggtgtagcattgcatgttgagtttaaatcatacctgag
cctgttagaataaggattagtagacccatagagaatagattgacccatgt
tctggattt
gaattcacaggtatcttctttcctttgttgagtgctgggattaaatggtg
ctcacaaacgtgcatgggattaataattttattatgaatttttggaagat
gaacaagatgttttaattgctaatctgcccagggggtagagagatagatt
agcatataaaagcaagagctaatcttttagaggattggggaatcaatgcc
ccaattctctaaaattcccaaagacacaaatgtctttaactccagcttca
ggggatttcttgccagcttctggcctccatgcgcactatgcaatgtagtg
caatgatacaaccacaaaagcatctatacactcacacacacaaaggaaga
gggagggggaagggaacttttcacacaatagcatttgcaaaattttaact
taaattctgtgatattttctaagatttaaaaaacttcattaaaagctttc
acaagtttctcatccttatgtttctattacgtataatgttaggatttgta
agccaatataatactggataaatgctatatcacatgatttacattggtat
gtttctctctagtatgaactctctgatgtcttctaagatttgaaaggtgg
ataaaggtttgtcacagtcttagcatttataaggtttctctcaagtatga
attttctgatgtgctctaaggtaggagcacctagtaaaagatttgtcaca
ttctgtacatttataaggtttctctccagtatgaactctctgatgtgctc
taagatttgagttatgagtaaaggacttgtcacattccatacatttgtaa
ggtttctcaccagtatgaatttttcgaatgtatcttaagagctgaattca
cagaaaagggatttgtcacacacctcacatttgtaaggcttttcaccagt
atgggttctggaatgccttttaagatgtgatatttcaagaaaggattttc
ccacattcttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_21691900_21693012
seq2: B6Ng01-172K14.b_44_1152

seq1  GAATTCAGTATTAATTTTACTTTTTCTCTTTGACCCCTTGGTACTAAAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTATTAATTTTACTTTTTCTCTTTGACCCCTTGGTACTAAAGA  50

seq1  CCACAATCTGGCTATTCATTGTTATTCAAAGAGAAAATCAAAGAAGAGAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACAATCTGGCTATTCATTGTTATTCAAAGAGAAAATCAAAGAAGAGAA  100

seq1  ACAGGAAGAAATGGCCAATTCTCCAGTAAACACATCCCAGGTCAGTGGTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGAAGAAATGGCCAATTCTCCAGTAAACACATCCCAGGTCAGTGGTC  150

seq1  ATGTCCACTTTCATTCTGAAAATATTATAGTTTGATATATTGCAAACCTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCCACTTTCATTCTGAAAATATTATAGTTTGATATATTGCAAACCTT  200

seq1  AAATTTTCTGCTTCTGATGATGTTTTAAAAATTTATCTTTATGAACTGAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTTTCTGCTTCTGATGATGTTTTAAAAATTTATCTTTATGAACTGAT  250

seq1  TCACCACCAAACCCCAAAAACCTGTGAAGGAATTAGAACAAGAAAAGCAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACCACCAAACCCCAAAAACCTGTGAAGGAATTAGAACAAGAAAAGCAA  300

seq1  TTACCTTTATGTCCTTTTTCATAATGAGTGGTCATTACATCCATGAAACG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACCTTTATGTCCTTTTTCATAATGAGTGGTCATTACATCCATGAAACG  350

seq1  GATGATCTTGAGTGTAGACTGAGATTATATTCTACTTGTCTTTCTCTTCG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGATCTTGAGTGTAGACTGAGATTATATTCTACTTGTCTTTCTCTTCG  400

seq1  GTATTTAAATCATGATGGTGGTGATGTGTCTACATGTGTGTTGGCACTTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTTAAATCATGATGGTGGTGATGTGTCTACATGTGTGTTGGCACTTC  450

seq1  ATATCTCTTTATCCCAGGAGAATTACAATCTTGGTTATTTCTGAAAGTAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATCTCTTTATCCCAGGAGAATTACAATCTTGGTTATTTCTGAAAGTAG  500

seq1  AGAGATCAGTATTTTTACTCCTTTTCATTTACTCTTTTTTGTGTCCCACA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGATCAGTATTTTTACTCCTTTTCATTTACTCTTTTTTGTGTCCCACA  550

seq1  TGCATACACTTGGGCTTGGACTCATTGTGTAGAATTATGTGGAATTCATC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATACACTTGGGCTTGGACTCATTGTGTAGAATTATGTGGAATTCATC  600

seq1  CATACAAATGTCTTGTGGGCATTGACTGACATGTGCATAAGCTGTTATTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATACAAATGTCTTGTGGGCATTGACTGACATGTGCATAAGCTGTTATTT  650

seq1  GATGCAGAGAAACTATCCCCTCATTATGGCCTTGCTCTAGACACTTTGAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGCAGAGAAACTATCCCCTCATTATGGCCTTGCTCTAGACACTTTGAA  700

seq1  TGTCAGCACTCCATGCCTACCCTGCAGTTGCAGTGTACTGAAATTGATAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCAGCACTCCATGCCTACCCTGCAGTTGCAGTGTACTGAAATTGATAT  750

seq1  TGTTCTATGTTGGCTCTTCTATATGCTTAGAACAAGTTTAGATTTTATTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCTATGTTGGCTCTTCTATATGCTTAGAACAAGTTTAGATTTTATTA  800

seq1  AGTGTATCTTATGCAGATTTTCTTATCTGCTTGTTAGTGGCCCAAATAGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTATCTTATGCAGATTTTCTTATCTGCTTGTTAGTGGCCCAAATAGT  850

seq1  CTTATAAAAATTAATTTGGTAGGCTACTTGATTTTTATGTTACAATTAAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATAAAAATTAATTTGGTAGGCTACTTGATTTTTATGTTACAATTAAA  900

seq1  CTTGTGAGTATGTAGCATTACTACAATCCTTGTTACTGTGGCAAAATATC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTGAGTATGTAGCATTACTACAATCCTTGTTACTGTGGCAAAATATC  950

seq1  AAAATGCTTTGCTTAAAAGTCAATGGGTTCTGCCTTCCATATCTACCCCT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATGCTTTGCTTAAAAGTCAATGGGTTCTGCCTTCCATATCTACCCCT  1000

seq1  TTGCTATTTAATGGTGTAGCATTGCATGTTGAGTTTAAAAATCATACCTG  1050
      ||||||||||||||||||||||||||||||||||||  ||||||||||||
seq2  TTGCTATTTAATGGTGTAGCATTGCATGTTGAGTTT--AAATCATACCTG  1048

seq1  AGCCTGTTAGAAT-AGGATTAGGTAAGACCCAATAGAGATAGGATTGACT  1099
      ||||||||||||| ||||||||   |||||| |||||||   ||||||| 
seq2  AGCCTGTTAGAATAAGGATTAG--TAGACCC-ATAGAGAATAGATTGACC  1095

seq1  CAATGTCTGGATTT  1113
      ||   |||||||||
seq2  CATGTTCTGGATTT  1109

seq1: chr17_21799521_21800147
seq2: B6Ng01-172K14.g_62_688 (reverse)

seq1  AATGCTAAGACTGTGACAAACCTTTATCCACCTTTCAAATCTTAGAAGAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCTAAGACTGTGACAAACCTTTATCCACCTTTCAAATCTTAGAAGAC  50

seq1  ATCAGAGAGTTCATACTAGAGAGAAACATACCAATGTAAATCATGTGATA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGAGAGTTCATACTAGAGAGAAACATACCAATGTAAATCATGTGATA  100

seq1  TAGCATTTATCCAGTATTATATTGGCTTACAAATCCTAACATTATACGTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCATTTATCCAGTATTATATTGGCTTACAAATCCTAACATTATACGTA  150

seq1  ATAGAAACATAAGGATGAGAAACTTGTGAAAGCTTTTAATGAAGTTTTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGAAACATAAGGATGAGAAACTTGTGAAAGCTTTTAATGAAGTTTTTT  200

seq1  AAATCTTAGAAAATATCACAGAATTTAAGTTAAAATTTTGCAAATGCTAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCTTAGAAAATATCACAGAATTTAAGTTAAAATTTTGCAAATGCTAT  250

seq1  TGTGTGAAAAGTTCCCTTCCCCCTCCCTCTTCCTTTGTGTGTGTGAGTGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGAAAAGTTCCCTTCCCCCTCCCTCTTCCTTTGTGTGTGTGAGTGT  300

seq1  ATAGATGCTTTTGTGGTTGTATCATTGCACTACATTGCATAGTGCGCATG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGATGCTTTTGTGGTTGTATCATTGCACTACATTGCATAGTGCGCATG  350

seq1  GAGGCCAGAAGCTGGCAAGAAATCCCCTGAAGCTGGAGTTAAAGACATTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGCCAGAAGCTGGCAAGAAATCCCCTGAAGCTGGAGTTAAAGACATTT  400

seq1  GTGTCTTTGGGAATTTTAGAGAATTGGGGCATTGATTCCCCAATCCTCTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTCTTTGGGAATTTTAGAGAATTGGGGCATTGATTCCCCAATCCTCTA  450

seq1  AAAGATTAGCTCTTGCTTTTATATGCTAATCTATCTCTCTACCCCCTGGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGATTAGCTCTTGCTTTTATATGCTAATCTATCTCTCTACCCCCTGGG  500

seq1  CAGATTAGCAATTAAAACATCTTGTTCATCTTCCAAAAATTCATAATAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATTAGCAATTAAAACATCTTGTTCATCTTCCAAAAATTCATAATAAA  550

seq1  ATTATTAATCCCATGCACGTTTGTGAGCACCATTTAATCCCAGCACTCAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATTAATCCCATGCACGTTTGTGAGCACCATTTAATCCCAGCACTCAA  600

seq1  CAAAGGAAAGAAGATACCTGTGAATTC  627
      |||||||||||||||||||||||||||
seq2  CAAAGGAAAGAAGATACCTGTGAATTC  627