BAC Information

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BAC

Clone NameB6Ng01-174B18
Chromosome17 (Build37)
Map Location 75,964,495 - 75,965,575
singlet/doubletsinglet
Overlap genenone
Upstream geneBirc6, Ttc27, LOC100043672, Ltbp1, EG621988, Rasgrp3, 2810405J04Rik
Downstream geneLOC668787, LOC100043885, LOC100043886
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-174B18.bB6Ng01-174B18.g
ACCGA002280GA002281
length1,1691,080
definitionB6Ng01-174B18.b B6Ng01-174B18.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttagctctgcaccccattttttaatgtggttatttggttttct
ggagtctaatttcttgggttctttatatattttggggattagccctctat
cagatgtagggttggtaaagctctttttccaacctgttgattgctgtttt
gtcctattgacagtgttctttgccttacagaagcgttttaattttatgag
gtcccatttgtccattgatgatcatagagcctgagccattggtactctat
tcaagaaattttccctgtcccaatgtgttcaaggatcattcctactttct
ctcttattagattcattcggtgtatctggttttgtgtgggggtccttgat
ccacttgaacttgagctttgtacaaggagataagaatggatcgatttgct
ttcttctacatgctaaccgccaattgagccagcactatttgttgaaaatg
ctttcttttttccactgtatgattttggcttctttgtcaaaaaccaagtg
accataggtgtgtgggtttatttctgggtctcaattctataccattgatc
tacctgtctgccactgtaccagtaccatgcagtttttaatcacaattgct
ctgtagtacaacttgaagtaaggggtggtgattcacgcagaagttctttt
attgttgagaattgttttcactatcctgggttttttgttattccagatga
gaataacaaaaacaatattgaaaacagctagtgtaggattgcaaccttgt
acaaccaaattttttatgaaggcactcagtgctttcaattttcctcttag
cactgctttcattgtgtcccatatgtttggatatgtggtgcccttcattt
taaattctaaaacatcttgaaattcttcatttttttccctgaccaaaatt
atctttgaatagagagttgttcagtttccatgaataatgtggactttcct
gctgttttatggttattgaaaacccagccttaagtctatgggtaatctga
tagaatgcatggagattccaatttaaatcatcttatattctggttgaggg
ttggttttgatgtccgattaatgattgaactttgggagagggttaccatg
gagtttactggaagaagaaacgtatcattccttttgtgttcttagggcgg
aacatggattcgtgaatat

gaattccttcttagcacattaacaacaaacagtcccaataacttggtggc
ttagctgttccaggatcctctgactaaccaatcagactagaaaactctga
aagtcctcaacatctgcttgaattgttttgacttgaatttatggagttgc
attgaagaattaactgttacaaagattccaaaaaatacttcgttgttttt
gttttttgtttgtttgtttgttttgtttgttttttagcttgcaaagagat
aaggaaaacagaatcaggtcttttagatgcaatgcttcattaaagcaaaa
ttatatgctcttgtttggtgagagtgatcatcattgcctgccttctcctt
ggtttctactacattttttttttcctgctgttgctaaacaataaaaagac
gttatctctcccgtgttcgttattcatgactatatcccttaaagcagcac
taaaatgtccaaactagtaaaatgaacgactaatgcttttgaaggatatc
atggctcaacattcaaaatgtatacaccattggccttggcattgttgatt
atttaaaggtaaaggcaagggagaacagcagatgaagattaattctctgc
tgttctgctgtctgcctagcagaggaggcataaatctgcccccctctgct
gtaaccagatgaggagagaggtgtttatcacaggagactggagaaccata
ctcaaatgagtctgtacaaataggtattactgaaaataacaactggctgg
ttatttcctagtcactgtgctcttatgtaaattctgtttttgttttgttt
ttgttttgttttgggtttttttttttggttttcgagacagggtttctctg
tgtaggccctggctgtccctggaactcacttgtagaccaggctgggcctc
gaactcagaaaattgcagcctctccctcccagtgctgggattaatggcgt
gtgccaccatgcccgggttatgtaaatcttaaagccccaatcctcccttt
ctttgtcccctgctcaaattcttatcttgttaaaataatgtagtcttgat
gtctcatacttctttcagacctcatctttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_75964495_75965575
seq2: B6Ng01-174B18.g_69_1148

seq1  GAATTCCTTCTTAGCACATTAACAACAAACAGTCCCAATAACTTGGTGGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTCTTAGCACATTAACAACAAACAGTCCCAATAACTTGGTGGC  50

seq1  TTAGCTGTTCCAGGATCCTCTGACTAACCAATCAGACTAGAAAACTCTGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGCTGTTCCAGGATCCTCTGACTAACCAATCAGACTAGAAAACTCTGA  100

seq1  AAGTCCTCAACATCTGCTTGAATTGTTTTGACTTGAATTTATGGAGTTGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCCTCAACATCTGCTTGAATTGTTTTGACTTGAATTTATGGAGTTGC  150

seq1  ATTGAAGAATTAACTGTTACAAAGATTCCAAAAAATACTTCGTTGTTTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGAAGAATTAACTGTTACAAAGATTCCAAAAAATACTTCGTTGTTTTT  200

seq1  GTTTTTTGTTTGTTTGTTTGTTTTGTTTGTTTTTTAGCTTGCAAAGAGAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTTTGTTTGTTTGTTTGTTTTGTTTGTTTTTTAGCTTGCAAAGAGAT  250

seq1  AAGGAAAACAGAATCAGGTCTTTTAGATGCAATGCTTCATTAAAGCAAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAAAACAGAATCAGGTCTTTTAGATGCAATGCTTCATTAAAGCAAAA  300

seq1  TTATATGCTCTTGTTTGGTGAGAGTGATCATCATTGCCTGCCTTCTCCTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATATGCTCTTGTTTGGTGAGAGTGATCATCATTGCCTGCCTTCTCCTT  350

seq1  GGTTTCTACTACATTTTTTTTTTCCTGCTGTTGCTAAACAATAAAAAGAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTCTACTACATTTTTTTTTTCCTGCTGTTGCTAAACAATAAAAAGAC  400

seq1  GTTATCTCTCCCGTGTTCGTTATTCATGACTATATCCCTTAAAGCAGCAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTATCTCTCCCGTGTTCGTTATTCATGACTATATCCCTTAAAGCAGCAC  450

seq1  TAAAATGTCCAAACTAGTAAAATGAACGACTAATGCTTTTGAAGGATATC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATGTCCAAACTAGTAAAATGAACGACTAATGCTTTTGAAGGATATC  500

seq1  ATGGCTCAACATTCAAAATGTATACACCATTGGCCTTGGCATTGTTGATT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGCTCAACATTCAAAATGTATACACCATTGGCCTTGGCATTGTTGATT  550

seq1  ATTTAAAGGTAAAGGCAAGGGAGAACAGCAGATGAAGATTAATTCTCTGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAAAGGTAAAGGCAAGGGAGAACAGCAGATGAAGATTAATTCTCTGC  600

seq1  TGTTCTGCTGTCTGCCTAGCAGAGGAGGCATAAATCTGCCCCCCTCTGCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCTGCTGTCTGCCTAGCAGAGGAGGCATAAATCTGCCCCCCTCTGCT  650

seq1  GTAACCAGATGAGGAGAGAGGTGTTTATCACAGGAGACTGGAGAACCATA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAACCAGATGAGGAGAGAGGTGTTTATCACAGGAGACTGGAGAACCATA  700

seq1  CTCAAATGAGTCTGTACAAATAGGTATTACTGAAAATAACAACTGGCTGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAAATGAGTCTGTACAAATAGGTATTACTGAAAATAACAACTGGCTGG  750

seq1  TTATTTCCTAGTCACTGTGCTCTTATGTAAATTCTGTTTTTGTTTTGTTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTCCTAGTCACTGTGCTCTTATGTAAATTCTGTTTTTGTTTTGTTT  800

seq1  TTGTTTTGTTTT-GGTTTTTTTTTTGGTTTTTCGAGACAGGGTTTCTCTG  849
      |||||||||||| |||||||||||| | ||||||||||||||||||||||
seq2  TTGTTTTGTTTTGGGTTTTTTTTTTTGGTTTTCGAGACAGGGTTTCTCTG  850

seq1  TGTA-GCCCTGGCTGT-CCTGGAACTCACTTTGTAGACCAGGCT-GGCCT  896
      |||| ||||||||||| |||||||||||| |||||||||||||| |||||
seq2  TGTAGGCCCTGGCTGTCCCTGGAACTCAC-TTGTAGACCAGGCTGGGCCT  899

seq1  CGAACTCAGAAAATTGCAGCCTCTCCCTCCCAAGTGCTGGGATTAAAGGC  946
      ||||||||||||||||||||||||||||||| |||||||||||||| |||
seq2  CGAACTCAGAAAATTGCAGCCTCTCCCTCCC-AGTGCTGGGATTAATGGC  948

seq1  GTGTGCCACCATGCCCGGTTTATGTAAATTCTTTAAAGCCCCAATCC-CC  995
      |||||||||||||||||| ||||||||||   ||||||||||||||| ||
seq2  GTGTGCCACCATGCCCGGGTTATGTAAAT--CTTAAAGCCCCAATCCTCC  996

seq1  CTTTCTTTGTCCACTGCTCCAAAATTTCTTATTCTTTGGTAAAATAATGT  1045
      |||||||||||| ||||||   || |||||||   ||| |||||||||||
seq2  CTTTCTTTGTCCCCTGCTC---AAATTCTTAT--CTTGTTAAAATAATGT  1041

seq1  AAGTCTTGATGTCTCATTACTTC-TTCAGAC----TCTTTT  1081
       ||||||||||||||| |||||| |||||||    ||||||
seq2  -AGTCTTGATGTCTCA-TACTTCTTTCAGACCTCATCTTTT  1080


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