BAC Information

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BAC

Clone NameB6Ng01-179E13
Chromosome17 (Build37)
Map Location 17,349,573 - 17,350,422
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100041383, LOC100041394, LOC213781, LOC100041407, LOC665072, EG383211, LOC626785, LOC665085, BC002059, BC018101, Zfp97, EG382161
Downstream geneLOC676238, EG626854, LOC100041965, Riok2, Lix1, LOC383297, Lnpep, EG665140, LOC100041519, EG626942, 4930546H06Rik, Has1, Fpr1, Fpr-rs2, LOC665183, LOC670250, EG665187, LOC546683, Fprl1, LOC627060, Fpr-rs4, EG637021, EG665210, Vmn2r92
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-179E13.g
ACCGA006046
length852
definitionB6Ng01-179E13.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgtttaaatgtgttcataaatttttatctgttcttttgtttg
ttttgtatatttttaaaacatgtgattacttgaggtctttgtatattttt
gtatattacaactctatcatgtagggctcggtagaaaaaaagtatcctca
ttccgtaatttccctctttcattttctaatcaacttggcttttgccttac
agaaacgtcactatttcttgagttccaatttattaattgctgatcttaat
gccagcgatattagtgtttttcagaaggctgtctgctgtgacagtgctgc
tggggatgttctccccatagggttcactcaggtttgctgttgtctgactt
taagtctttaatccacttggacttgagttttgtgcagggtgagtaatata
ggtatacttgcattcttttgcttgtagagctacagtttaataagctatat
gaagttagcttatcacttacagcttaattattcttgcgcacgcccaactc
gccagcaagaaagatgctgcaacaggatccttctacacacatttattggg
agagcttgattgccgaggcgaagagaccccaagcccataactggtgctgc
ttatataggcctaggagaggtgtgtctcagacctggataggttgtgcatg
gattatgcttaccacctcatttgcatgcctacatctgattggataagttc
tctctcatctgattggttaagttctctctcatctgattggttaattctca
aaaccgcatcttgggaagaaaaattttactgcctatgtatgtgtggtgga
ccatcggtaagtagcgccaccccgcaacggcacatgtgggcttcccacaa
gt
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_17349573_17350422
seq2: B6Ng01-179E13.g_66_917

seq1  GAATTCTTTGTTTAAATGTGTTCATAAATTTTTATCTGTTCTTTTGTTTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTGTTTAAATGTGTTCATAAATTTTTATCTGTTCTTTTGTTTG  50

seq1  TTTTGTATATTTTTAAAACATGTAGTTACTTGAGGTCTTTGTATATTTTT  100
      |||||||||||||||||||||||  |||||||||||||||||||||||||
seq2  TTTTGTATATTTTTAAAACATGTGATTACTTGAGGTCTTTGTATATTTTT  100

seq1  GTATATTACAACTCTATCATGTAGGGCTCGGTAGAAAAAAAGTATCCTCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATATTACAACTCTATCATGTAGGGCTCGGTAGAAAAAAAGTATCCTCA  150

seq1  TTCCGTAATTTCCCTCTTTCATTTTCTAATCAACTTGGCTTTTGCCTTAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCGTAATTTCCCTCTTTCATTTTCTAATCAACTTGGCTTTTGCCTTAC  200

seq1  AGAAACATCACTATTTCTTGAGTTCCAATTTATTAATTGCTGATCTTAAT  250
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAACGTCACTATTTCTTGAGTTCCAATTTATTAATTGCTGATCTTAAT  250

seq1  GCCAGCGATATTAGTGTTTTTCAGAAGGCTGTCTGCTGTGACAGTGCTGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGCGATATTAGTGTTTTTCAGAAGGCTGTCTGCTGTGACAGTGCTGC  300

seq1  TGGGGATGTTCTCCCCATAGGGTTCACTCAGGTTTGCTGTTGTCTGACTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGATGTTCTCCCCATAGGGTTCACTCAGGTTTGCTGTTGTCTGACTT  350

seq1  TAAGTCTTTAATCCACTTGGACTTGAGTTTTGTGCAGGGTGAGTAATATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTCTTTAATCCACTTGGACTTGAGTTTTGTGCAGGGTGAGTAATATA  400

seq1  GGTATACTTGCATTCTTTTGCATGTAGAGCTACAGTTTAATAAGCTATAT  450
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  GGTATACTTGCATTCTTTTGCTTGTAGAGCTACAGTTTAATAAGCTATAT  450

seq1  GAAGTTAGCTTATCACTTACAGCTTAGTTATTCTTGCGCACGCCCAACTC  500
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  GAAGTTAGCTTATCACTTACAGCTTAATTATTCTTGCGCACGCCCAACTC  500

seq1  GCCAGCAAGAAAGATGCTGCAACAGGATCCTTCTACACACATTTATTGGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGCAAGAAAGATGCTGCAACAGGATCCTTCTACACACATTTATTGGG  550

seq1  AGAGCTTGATTGCAGAGGCGAAGAGACCCCAAGCCCAGAACTGGTGCTGC  600
      ||||||||||||| ||||||||||||||||||||||| ||||||||||||
seq2  AGAGCTTGATTGCCGAGGCGAAGAGACCCCAAGCCCATAACTGGTGCTGC  600

seq1  TTATATAGGCCTAGGAGAGGTGTGTCTCACACCTGGATTGGTTGTGCATG  650
      ||||||||||||||||||||||||||||| |||||||| |||||||||||
seq2  TTATATAGGCCTAGGAGAGGTGTGTCTCAGACCTGGATAGGTTGTGCATG  650

seq1  GGTTATGCTTACCACCTCATTTGCATGCCTACATCTGATTGGTTAAGTTC  700
      | |||||||||||||||||||||||||||||||||||||||| |||||||
seq2  GATTATGCTTACCACCTCATTTGCATGCCTACATCTGATTGGATAAGTTC  700

seq1  TCTCTCATCTGATTGGTTAAGTTCTCTCTCATCTGATTGGTTAATTCTCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCATCTGATTGGTTAAGTTCTCTCTCATCTGATTGGTTAATTCTCA  750

seq1  AAACCTCATCTTGGCAAGAAAAACTTTACTGCCTATGTATGTGTGGTGG-  799
      ||||| |||||||| |||||||| ||||||||||||||||||||||||| 
seq2  AAACCGCATCTTGGGAAGAAAAATTTTACTGCCTATGTATGTGTGGTGGA  800

seq1  CCAGCGGTAGTTAGCGCCACCCTGCAACGGCACATGT-GGCTTCCCACAA  848
      ||| |||||  ||||||||||| |||||||||||||| ||||||||||||
seq2  CCATCGGTAAGTAGCGCCACCCCGCAACGGCACATGTGGGCTTCCCACAA  850

seq1  GT  850
      ||
seq2  GT  852