BAC Information

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BAC

Clone NameB6Ng01-182B03
Chromosome17 (Build37)
Map Location 78,218,233 - 78,219,374
singlet/doubletsinglet
Overlap genenone
Upstream geneEG624348, LOC545234, LOC100043887
Downstream geneLOC668795, LOC383275, Crim1, Fez2, LOC100043888, Hdac1-ps, Vit, Strn, Heatr5b
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-182B03.bB6Ng01-182B03.g
ACCGA008062GA008063
length1,1211,182
definitionB6Ng01-182B03.b B6Ng01-182B03.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccaggtagagtggaatgtctcttgtccatgagagttgtataagtg
gagaagtatccgccagtagacatgatgacatccaggcctgcagcctcctg
ttggaaacactcagcacagcttttactgcctgacagttcaagagcgctga
agagctgctgtgagcacgggctgaggagattttccattgattctaacttt
gcaacaagggaagcccagaggagcaggtggctccaatagaggaggcttcg
acattaaacgcgaaaagtatagtcaatactgctaaaaccgagtttgtgat
cagaagattaaatggaggaagacactttcaacacaaaggagaagctctgc
aaaatgctaatcgtggctgaaagatgagaggcatgctgggaaatccctgg
agagacaatatgcaaggagaggcacagatggagaaaggaccaataatcaa
aataatgatcttcagctcccttatttgaaaaaaaaaaagatcaaaagcac
ccacaaatacaaggcagaaatgataaaaaatgaaacatcaagacatatct
tttggaaatttctggtgtctggatagaggcaaaatgcatatactttcaga
cagatagaaaagttcatttataatggggaaagaaccagtaaacatttgta
ggtcactctggatgctaatgcagtgtttataagcctagggagaaagatct
gggtcataacagtatgacttatcactcatatgatcacacacagaataagg
aaatccaaggaaaatttggggattgaaattgttcctcctatactgccact
taaagtcacctaaaggcatcctccatcagaaataatgttaaattttgatg
gatttctaaagtaagcaattggtaatgaagtaaacgatttttaataagtc
aagaaaagagatgttagcttgttatgataacaaagcgtgattgaagtggt
aatgtcattatttaatacagcagcaaagatatgcatactattgagaactg
aaaaacagtgtgagtcagattttaatgtactgaatgtacgcttgggatgg
tatgatgatcaagaattattcatatttttaaaatgatgataagggtttaa
cagactcattcatggcgcata
gaattctcacccgaggaatactgaaaggctgagaaacacctgaaaaaatg
ttcaacatccataatcatcagagaaatgcaagtcaaaacaaccctgagat
tccatctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
aaatgctggcgaggatgtggagaaagaggaacagtcttccattgttggtg
ggattgcaagcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtattaccggaggatcctgcaatacctcttctgggc
atatatccagaagatgtcccagccggtaagaaggacacatgccccactat
gttcatagcagccttatttaaaatagccaggagctggaaagaacccagat
gcccctcaacagaggaatggatacaaaaaatgtggtacatttacacaatg
gagtactactcagctattaaaaagaatgaatttacgaaattcctaggcaa
atggatggacctggagggcatcatcctgagtgaggtaacccaatcacaaa
agaactcaaatgaaatgtactcactgataagtggatattagcccagatac
ttagtatagcaagatataaggtacaagatgcaaaacacatgaaactgaag
aagaacgaagaccaaagtgtggacactttgctccttcttaggattggaaa
caatcacccatggaaggagttacagagacaatgtttggagctgagacaaa
aggatggaccatctagagtctgccatatccagggttccgtcccataatta
gcctccaaacgatgacaccatggcatacactagcaagcctttgttgcaag
gactgtgatatagctgtcccttgtgagactaggccggagcctagcaaaca
cagaagtggatgctcacagtcaactattggatggatcacagggcccccaa
tggaggagctagagaaagtatccaagagctaagagatctgcaccctatag
gtggacacatatgactaccagtaccccagagcctcttgacttctagctac
atatgtattcaaaaatggctagtcgcaatcaatgaagagaggccaatggt
cagccaacttttaatgccaagttacgtgatgcaaggtccataatgggaat
tgggtgggtatggcaagtatgtcctcgatatc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_78218233_78219374
seq2: B6Ng01-182B03.b_43_1163 (reverse)

seq1  TATGCGCAATTGTATGAGTCTGTTAAAACCCTTATCATTCCATTTTTTAA  50
      ||||||| | || ||||||||||| |||||||||||||  ||  ||||||
seq2  TATGCGCCA-TGAATGAGTCTGTT-AAACCCTTATCAT--CA--TTTTAA  44

seq1  AAATATGATTTATTCTCTGACTCATTCATACCATTCCCAAACCCTACATT  100
      |||||||| | ||||| ||| ||| |||||||||  || || | ||||||
seq2  AAATATGAATAATTCT-TGA-TCA-TCATACCAT--CCCAAGCGTACATT  89

seq1  TTCCAAGTTACATTAAAATCTGACTCCACACTGTTTTTCAGTTTTCTCAA  150
         ||   ||||||||||||||||| |||||||||||||||  |||||||
seq2  ---CA--GTACATTAAAATCTGACT-CACACTGTTTTTCAG--TTCTCAA  131

seq1  TAGTATGCATATTCTTTGCCTGCTGTATTTAATAATGACATTACCACTTC  200
      ||||||||||| |||||| |||||||||| ||||||||||||||||||||
seq2  TAGTATGCATA-TCTTTG-CTGCTGTATTAAATAATGACATTACCACTTC  179

seq1  AATCACGCTTTGTTATCATAACAAGCTAACATCTCTTTTCTTGACTTATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCACGCTTTGTTATCATAACAAGCTAACATCTCTTTTCTTGACTTATT  229

seq1  AAAAATCGTTTACTTCATTACCAATTGCTTACTTTAGAAATCCATCAAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATCGTTTACTTCATTACCAATTGCTTACTTTAGAAATCCATCAAAA  279

seq1  TTTAACATTATTTCTGATGGAGGATGCCTTTAGGTGACTTTAAGTGGCAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAACATTATTTCTGATGGAGGATGCCTTTAGGTGACTTTAAGTGGCAG  329

seq1  TATAGGAGGAACAATTTCAATCCCCAAATTTTCCTTGGATTTCCTTATTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGGAGGAACAATTTCAATCCCCAAATTTTCCTTGGATTTCCTTATTC  379

seq1  TGTGTGTGATCATATGAGTGATAAGTCATACTGTTATGACCCAGATCTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTGATCATATGAGTGATAAGTCATACTGTTATGACCCAGATCTTT  429

seq1  CTCCCTAGGCTTATAAACACTGCATTAGCATCCAGAGTGACCTACAAATG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCTAGGCTTATAAACACTGCATTAGCATCCAGAGTGACCTACAAATG  479

seq1  TTTACTGGTTCTTTCCCCATTATAAATGAACTTTTCTATCTGTCTGAAAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACTGGTTCTTTCCCCATTATAAATGAACTTTTCTATCTGTCTGAAAG  529

seq1  TATATGCATTTTGCCTCTATCCAGACACCAGAAATTTCCAAAAGATATGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATGCATTTTGCCTCTATCCAGACACCAGAAATTTCCAAAAGATATGT  579

seq1  CTTGATGTTTCATTTTTTATCATTTCTGCCTTGTATTTGTGGGTGCTTTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGATGTTTCATTTTTTATCATTTCTGCCTTGTATTTGTGGGTGCTTTT  629

seq1  GATCTTTTTTTTTTTCAAATAAGGGAGCTGAAGATCATTATTTTGATTAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCTTTTTTTTTTTCAAATAAGGGAGCTGAAGATCATTATTTTGATTAT  679

seq1  TGGTCCTTTCTCCATCTGTGCCTCTCCTTGCATATTGTCTCTCCAGGGAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTCCTTTCTCCATCTGTGCCTCTCCTTGCATATTGTCTCTCCAGGGAT  729

seq1  TTCCCAGCATGCCTCTCATCTTTCAGCCACGATTAGCATTTTGCAGAGCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCAGCATGCCTCTCATCTTTCAGCCACGATTAGCATTTTGCAGAGCT  779

seq1  TCTCCTTTGTGTTGAAAGTGTCTTCCTCCATTTAATCTTCTGATCACAAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCTTTGTGTTGAAAGTGTCTTCCTCCATTTAATCTTCTGATCACAAA  829

seq1  CTCGGTTTTAGCAGTATTGACTATACTTTTCGCGTTTAATGTCGAAGCCT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCGGTTTTAGCAGTATTGACTATACTTTTCGCGTTTAATGTCGAAGCCT  879

seq1  CCTCTATTGGAGCCACCTGCTCCTCTGGGCTTCCCTTGTTGCAAAGTTAG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTATTGGAGCCACCTGCTCCTCTGGGCTTCCCTTGTTGCAAAGTTAG  929

seq1  AATCAATGGAAAATCTCCTCAGCCCGTGCTCACAGCAGCTCTTCAGCGCT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCAATGGAAAATCTCCTCAGCCCGTGCTCACAGCAGCTCTTCAGCGCT  979

seq1  CTTGAACTGTCAGGCAGTAAAAGCTGTGCTGAGTGTTTCCAACAGGAGGC  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGAACTGTCAGGCAGTAAAAGCTGTGCTGAGTGTTTCCAACAGGAGGC  1029

seq1  TGCAGGCCTGGATGTCATCATGTCTACTGGCGGATACTTCTCCACTTATA  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGGCCTGGATGTCATCATGTCTACTGGCGGATACTTCTCCACTTATA  1079

seq1  CAACTCTCATGGACAAGAGACATTCCACTCTACCTGGAATTC  1142
      ||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTCTCATGGACAAGAGACATTCCACTCTACCTGGAATTC  1121