BAC Information

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BAC

Clone NameB6Ng01-184B01
Chromosome17 (Build37)
Map Location 91,941,633 - 91,942,682
singlet/doubletsinglet
Overlap genenone
Upstream geneNrxn1, EG668871, LOC668872, LOC627235
Downstream geneLOC100043741, LOC100043742, EG640442, LOC627395, LOC676141
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-184B01.bB6Ng01-184B01.g
ACCGA009535GA009536
length3551,050
definitionB6Ng01-184B01.b B6Ng01-184B01.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
cagagagtgagccatcaaccaggagcaaagactggcaggttcaaggcccc
tggcacttatgtggttgaggtctgcttggtttgacctcagaatatgtgct
tattcctcaagagacttgaggcctcactgaagcgggaggtctgatgtggg
caggtaccctctcagagacaagggggaggagaaatgggatgaggaactgt
gggagggagatggggtacaatgactggaatgtaaataaataaaataaaag
gtcagatgtgaaccactttttatagatggccttgatgtctggatgtctag
gaggaagaatttattttgtttttcttttcttccactcctgtgggtcagca
cagct

gaattctttgtttagctctgtactgcatttttaaatagacttatttggtt
ctctggagtctaatagcttgagttccttgtatattttggatattatccct
ctatctgatataggattggtaaagatcttttcccaatctgtgtattgctg
ttttgccctattgacagtgcccttgaccttacagaagcctttcaatctta
tgaggctccatttgtcaatttttgattttgggcataagctattggtgttc
tgttcaggaaattttctcctgtgcccatgttccccactttattttctatt
actttcagtgtatctagttttatgtggaggttcttgatctacttggactt
gagctttgtacaaggagatagaaatggactgatttgcattcttctacatg
ctaactcccatttgaaccagcaccatttgttgtaaatgctgtcttttttc
cactggatggttgttgggccctattttgaccttggtttaagccttgagga
caaacccaagcctgtctcaagtttctgcagccttgtgggagaacctaagc
ccagcttgagttttgagacctgtctgtcacttctgtatcaggatgaatca
acaagaccagtttggccctgcctttgtcccactgtttttgatgtagagct
ttgccattggccctgtcagtcactccatatcctctgtcacccttccctgc
ctcctatgtcatcttatcctaccaaaagtccccctacctatgtttcaaac
ttatataagggaaaggctgatgccataaagtgtagttcctgcttcaacca
gactcctgactcactgtgtttcttttggaccatcaacactcaccatcccg
ctcagcccgagagtgatccaggactgggacttctctcctcttgcctggac
ctgctggcagggagcctgcagatggttttagcgcctttgtcaaagatcaa
gtgaccatagtgtctgggttcatttctgggtcttcagtgagagtacacct
cacaccattcagaatggcctaagatcaaaacctcagggtgatagagatgc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_91941633_91942682
seq2: B6Ng01-184B01.g_65_1114 (reverse)

seq1  GCATCTCCTATCA-CCTGAGGTTTTGATCTTA-GCCATTCTGAATGGTGT  48
      |||||| |||||| |||||||||||||||||| |||||||||||||||||
seq2  GCATCT-CTATCACCCTGAGGTTTTGATCTTAGGCCATTCTGAATGGTGT  49

seq1  GAGGTGTACTCTCACTGAAGACCCAGAAATGAACCCAGACACCTATGGTC  98
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  GAGGTGTACTCTCACTGAAGACCCAGAAATGAACCCAGACA-CTATGGTC  98

seq1  ACTTGATCTTTGACAAAGGCGCTAAAACCATCTGCAGGCTCCCTGCCAGC  148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGATCTTTGACAAAGGCGCTAAAACCATCTGCAGGCTCCCTGCCAGC  148

seq1  AGGTCCAGGCAAGAGGAGAGAAGTCCCAGTCCTGGATCACTCTCGGGCTG  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTCCAGGCAAGAGGAGAGAAGTCCCAGTCCTGGATCACTCTCGGGCTG  198

seq1  AGCGGGATGGTGAGTGTTGATGGTCCAAAAGAAACACAGTGAGTCAGGAG  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCGGGATGGTGAGTGTTGATGGTCCAAAAGAAACACAGTGAGTCAGGAG  248

seq1  TCTGGTTGAAGCAGGAACTACACTTTATGGCATCAGCCTTTCCCTTATAT  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGTTGAAGCAGGAACTACACTTTATGGCATCAGCCTTTCCCTTATAT  298

seq1  AAGTTTGAAACATAGGTAGGGGGACTTTTGGTAGGATAAGATGACATAGG  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTTGAAACATAGGTAGGGGGACTTTTGGTAGGATAAGATGACATAGG  348

seq1  AGGCAGGGAAGGGTGACAGAGGATATGGAGTGACTGACAGGGCCAATGGC  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCAGGGAAGGGTGACAGAGGATATGGAGTGACTGACAGGGCCAATGGC  398

seq1  AAAGCTCTACATCAAAAACAGTGGGACAAAGGCAGGGCCAAACTGGTCTT  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCTCTACATCAAAAACAGTGGGACAAAGGCAGGGCCAAACTGGTCTT  448

seq1  GTTGATTCATCCTGATACAGAAGTGACAGACAGGTCTCAAAACTCAAGCT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGATTCATCCTGATACAGAAGTGACAGACAGGTCTCAAAACTCAAGCT  498

seq1  GGGCTTAGGTTCTCCCACAAGGCTGCAGAAACTTGAGACAGGCTTGGGTT  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCTTAGGTTCTCCCACAAGGCTGCAGAAACTTGAGACAGGCTTGGGTT  548

seq1  TGTCCTCAAGGCTTAAACCAAGGTCAAAATAGGGCCCAACAACCATCCAG  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCTCAAGGCTTAAACCAAGGTCAAAATAGGGCCCAACAACCATCCAG  598

seq1  TGGAAAAAAGACAGCATTTACAACAAATGGTGCTGGTTCAAATGGGAGTT  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAAAAAGACAGCATTTACAACAAATGGTGCTGGTTCAAATGGGAGTT  648

seq1  AGCATGTAGAAGAATGCAAATCAGTCCATTTCTATCTCCTTGTACAAAGC  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATGTAGAAGAATGCAAATCAGTCCATTTCTATCTCCTTGTACAAAGC  698

seq1  TCAAGTCCAAGTAGATCAAGAACCTCCACATAAAACTAGATACACTGAAA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGTCCAAGTAGATCAAGAACCTCCACATAAAACTAGATACACTGAAA  748

seq1  GTAATAGAAAATAAAGTGGGGAACATGGGCACAGGAGAAAATTTCCTGAA  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAATAGAAAATAAAGTGGGGAACATGGGCACAGGAGAAAATTTCCTGAA  798

seq1  CAGAACACCAATAGCTTATGCCCAAAATCAAAAATTGACAAATGGAGCCT  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAACACCAATAGCTTATGCCCAAAATCAAAAATTGACAAATGGAGCCT  848

seq1  CATAAGATTGAAAGGCTTCTGTAAGGTCAAGGGCACTGTCAATAGGGCAA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAAGATTGAAAGGCTTCTGTAAGGTCAAGGGCACTGTCAATAGGGCAA  898

seq1  AACAGCAATACACAGATTGGGAAAAGATCTTTACCAATCCTATATCAGAT  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGCAATACACAGATTGGGAAAAGATCTTTACCAATCCTATATCAGAT  948

seq1  AGAGGGATAATATCCAAAATATACAAGGAACTCAAGCTATTAGACTCCAG  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGGATAATATCCAAAATATACAAGGAACTCAAGCTATTAGACTCCAG  998

seq1  AGAACCAAATAAGTCTATTTAAAAATGCAGTACAGAGCTAAACAAAGAAT  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACCAAATAAGTCTATTTAAAAATGCAGTACAGAGCTAAACAAAGAAT  1048

seq1  TC  1050
      ||
seq2  TC  1050


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