BAC Information

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BAC

Clone NameB6Ng01-184B13
Chromosome17 (Build37)
Map Location 60,022,206 - 60,124,682
singlet/doubletdoublet
Overlap genenone
Upstream gene2610034M16Rik, Nudt12, 4930505H01Rik, LOC100043537, LOC100043542
Downstream geneLOC100043549
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-184B13.bB6Ng01-184B13.g
ACCGA009557GA009558
length7091,160
definitionB6Ng01-184B13.b B6Ng01-184B13.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(60,022,206 - 60,022,914)(60,123,508 - 60,124,682)
sequence
gaattctctgttgtccaaacagtaggatagattcctgtggtggttaacat
atgtctgtctttaaactgctgacttgaaaagatatgtcctcaaaagttct
cattgaaaacaacctatcagaacaggttcatggtttccttctaaccatat
tatctctacagagaagtttctctctgtttatgaaattatgacactggaaa
tggttctaaggtccccttaatttttatataaatttatatttttcagtgga
gaacatggagccgcccccaaagagttggtgtccaaatagtatagaatgac
aaagaggagagacaatcataaagtctggcttctcccctcactccaacaat
agggctgccagtaaggtttattatgatggaggttttatgaggtagacacc
tgttagataggagtccgatggtgactagctgctcatttcccacacaccac
tgcacagcgatccatttttaatcacttctggctaatgctctctgctaagc
cagtagttgtaatatgacccaggcagatattacactgtttaacattcttt
tctgtaagaggatgaaagagaatggaaattatcacatttgaagagaaata
cacttcagaatgatacatggtagtggtatacatttgttaaaggagtttta
acttaaatgacatatatgtacaagaactgtgtgtgtgtgtgtgtgtgtgt
gtgtgtgtg

gaattccaggcatggaccaaatgaaggtaagaacctgaaaacaggaactg
aggaagcagaggccactgatgtcgtactgctttctcaagcttgctcagtt
ggctttctttatatcccagagctacctgtctagggtaggtgctgcccaca
atgagttagctttttccattcaatcattaagaaagaaaatgccataaaag
tttgcctatagatgaatatagagggaagcttgtctcagttatgtggcaaa
ttgacaaaaacaaacaaacaaacaaacaacaaaaataaaaacaaaaataa
aagaaaaaaacataacctgaagaataattgctttttcttcaatatgatat
tgttgtgacaactattgttcctcagtaaaaacttacaataggaccaataa
aatacaaattttaacaaattgcagattctacttaaagtgtattagcatta
ttagcatattagaaatgtgtgtgcatggtgttgcttttgcctaaaaaaat
gagcaaagtataattttattattctcattgctacttataaaacaagcaga
acaatggatttaataaattattttcaaaaaatcatagatgcccatcaaat
ataaggttgaaaattgtttcctgaatttaagttgaagtctacagaatagc
aacgtacagatttctaattgatcttatgtttttaagtgtgtgagggcaat
ccttccttctacatctctaatcatactagaatgttggagatgatgaaaaa
gaaacttgactgctggccagatggaccagagactgtgagcttcttctgag
ctatcaaagtatcctgaaaaatacttgtttcccagaacctatgtgaggca
gctccctgcgaactgtacttaagatcacccctcttgtccccccaattaga
aatgaaataaaatctctgaaaaagatcagttgtgacttgttatatcttat
ttgcactacattaaatatcaaaaaagtttttttttcagaaataaaaacat
tgttttccctatgtctgtggtgaccttttgaacttgataatatatgcttt
tttttttagtacaaaacaacagacaatgtttcatgcatgcataatacatg
ttatataaaaatttatggtacataacacggatgaattacttggattgtaa
tggtcatgca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_60022206_60022914
seq2: B6Ng01-184B13.b_43_751

seq1  GAATTCTCTGTTGTCCAAACAGTAGGATAGATTCCTGTGGTGGTTAACAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTGTTGTCCAAACAGTAGGATAGATTCCTGTGGTGGTTAACAT  50

seq1  ATGTCTGTCTTTAAACTGCTGACTTGAAAAGATATGTCCTCAAAAGTTCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCTGTCTTTAAACTGCTGACTTGAAAAGATATGTCCTCAAAAGTTCT  100

seq1  CATTGAAAACAACCTATCAGAACAGGTTCATGGTTTCCTTCTAACCATAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGAAAACAACCTATCAGAACAGGTTCATGGTTTCCTTCTAACCATAT  150

seq1  TATCTCTACAGAGAAGTTTCTCTCTGTTTATGAAATTATGACACTGGAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTCTACAGAGAAGTTTCTCTCTGTTTATGAAATTATGACACTGGAAA  200

seq1  TGGTTCTAAGGTCCCCTTAATTTTTATATAAATTTATATTTTTCAGTGGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTCTAAGGTCCCCTTAATTTTTATATAAATTTATATTTTTCAGTGGA  250

seq1  GAACATGGAGCCGCCCCCAAAGAGTTGGTGTCCAAATAGTATAGAATGAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACATGGAGCCGCCCCCAAAGAGTTGGTGTCCAAATAGTATAGAATGAC  300

seq1  AAAGAGGAGAGACAATCATAAAGTCTGGCTTCTCCCCTCACTCCAACAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAGGAGAGACAATCATAAAGTCTGGCTTCTCCCCTCACTCCAACAAT  350

seq1  AGGGCTGCCAGTAAGGTTTATTATGATGGAGGTTTTATGAGGTAGACACC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGCTGCCAGTAAGGTTTATTATGATGGAGGTTTTATGAGGTAGACACC  400

seq1  TGTTAGATAGGAGTCCGATGGTGACTAGCTGCTCATTTCCCACACACCAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTAGATAGGAGTCCGATGGTGACTAGCTGCTCATTTCCCACACACCAC  450

seq1  TGCACAGCGATCCATTTTTAATCACTTCTGGCTAATGCTCTCTGCTAAGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCACAGCGATCCATTTTTAATCACTTCTGGCTAATGCTCTCTGCTAAGC  500

seq1  CAGTAGTTGTAATATGACCCAGGCAGATATTACACTGTTTAACATTCTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTAGTTGTAATATGACCCAGGCAGATATTACACTGTTTAACATTCTTT  550

seq1  TCTGTAAGAGGATGAAAGAGAATGGAAATTATCACATTTGAAGAGAAATA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTAAGAGGATGAAAGAGAATGGAAATTATCACATTTGAAGAGAAATA  600

seq1  CACTTCAGAATGATACATGGTAGTGGTATACATTTGTTAAAGGAGTTTTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTCAGAATGATACATGGTAGTGGTATACATTTGTTAAAGGAGTTTTA  650

seq1  ACTTAAATGACATATATGTACAAGAACTGTGTGTGTGTGTGTGTGTGTGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTAAATGACATATATGTACAAGAACTGTGTGTGTGTGTGTGTGTGTGT  700

seq1  GTGTGTGTG  709
      |||||||||
seq2  GTGTGTGTG  709


seq1: chr17_60123508_60124682
seq2: B6Ng01-184B13.g_62_1221 (reverse)

seq1  TGCATGACATATACAAT-CAAGTAATTTCATCAGTGTTTTATGTAACATA  49
      ||||||||   |||||| ||||||| |||||| |||  ||||||| ||||
seq2  TGCATGACCATTACAATCCAAGTAA-TTCATCCGTG--TTATGTACCATA  47

seq1  AA-TTTTATAT-ACATGTAATAATGCATGCATGAAAACATGTCTGTTGTT  97
      || |||||||| |||||| || ||||||||||||||   |||||||||||
seq2  AATTTTTATATAACATGT-ATTATGCATGCATGAAACATTGTCTGTTGTT  96

seq1  TTGTACCTAAAAAAAAAAAGCATTAATTATTTAATCAAAGTTTCAAAAAG  147
      ||||||   ||||||||||||||  |||||       |||||   |||||
seq2  TTGTAC--TAAAAAAAAAAGCATATATTAT------CAAGTT--CAAAAG  136

seq1  GTCACCAACAGAACATTAGGGAAAACAATTGTTTTATTTCTG-AAAAAAA  196
      |||||| |||| ||| |||||||||||||  ||||||||||| |||||||
seq2  GTCACC-ACAG-ACA-TAGGGAAAACAATGTTTTTATTTCTGAAAAAAAA  183

seq1  ACTTTTTTGATATTTAATGTAGTGCAAATAAGATTATAAACAAGTCACAA  246
      ||||||||||||||||||||||||||||||||| ||| ||||||||||||
seq2  ACTTTTTTGATATTTAATGTAGTGCAAATAAGA-TAT-AACAAGTCACAA  231

seq1  CTGATCTTTTTCAGAGATTTTATTTCATTTCTAATTGGGGGGACAAGAGG  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATCTTTTTCAGAGATTTTATTTCATTTCTAATTGGGGGGACAAGAGG  281

seq1  GGTGATCTTAAGTACAGTTCGCAGGGAGCTGCCTCACATAGGTTCTGGGA  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGATCTTAAGTACAGTTCGCAGGGAGCTGCCTCACATAGGTTCTGGGA  331

seq1  AACAAGTATTTTTCAGGATACTTTGATAGCTCAGAAGAAGCTCACAGTCT  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAGTATTTTTCAGGATACTTTGATAGCTCAGAAGAAGCTCACAGTCT  381

seq1  CTGGTCCATCTGGCCAGCAGTCAAGTTTCTTTTTCATCATCTCCAACATT  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTCCATCTGGCCAGCAGTCAAGTTTCTTTTTCATCATCTCCAACATT  431

seq1  CTAGTATGATTAGAGATGTAGAAGGAAGGATTGCCCTCACACACTTAAAA  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGTATGATTAGAGATGTAGAAGGAAGGATTGCCCTCACACACTTAAAA  481

seq1  ACATAAGATCAATTAGAAATCTGTACGTTGCTATTCTGTAGACTTCAACT  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATAAGATCAATTAGAAATCTGTACGTTGCTATTCTGTAGACTTCAACT  531

seq1  TAAATTCAGGAAACAATTTTCAACCTTATATTTGATGGGCATCTATGATT  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATTCAGGAAACAATTTTCAACCTTATATTTGATGGGCATCTATGATT  581

seq1  TTTTGAAAATAATTTATTAAATCCATTGTTCTGCTTGTTTTATAAGTAGC  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGAAAATAATTTATTAAATCCATTGTTCTGCTTGTTTTATAAGTAGC  631

seq1  AATGAGAATAATAAAATTATACTTTGCTCATTTTTTTAGGCAAAAGCAAC  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAGAATAATAAAATTATACTTTGCTCATTTTTTTAGGCAAAAGCAAC  681

seq1  ACCATGCACACACATTTCTAATATGCTAATAATGCTAATACACTTTAAGT  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATGCACACACATTTCTAATATGCTAATAATGCTAATACACTTTAAGT  731

seq1  AGAATCTGCAATTTGTTAAAATTTGTATTTTATTGGTCCTATTGTAAGTT  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATCTGCAATTTGTTAAAATTTGTATTTTATTGGTCCTATTGTAAGTT  781

seq1  TTTACTGAGGAACAATAGTTGTCACAACAATATCATATTGAAGAAAAAGC  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACTGAGGAACAATAGTTGTCACAACAATATCATATTGAAGAAAAAGC  831

seq1  AATTATTCTTCAGGTTATGTTTTTTTCTTTTATTTTTGTTTTTATTTTTG  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTATTCTTCAGGTTATGTTTTTTTCTTTTATTTTTGTTTTTATTTTTG  881

seq1  TTGTTTGTTTGTTTGTTTGTTTTTGTCAATTTGCCACATAACTGAGACAA  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTTGTTTGTTTGTTTGTTTTTGTCAATTTGCCACATAACTGAGACAA  931

seq1  GCTTCCCTCTATATTCATCTATAGGCAAACTTTTATGGCATTTTCTTTCT  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCCCTCTATATTCATCTATAGGCAAACTTTTATGGCATTTTCTTTCT  981

seq1  TAATGATTGAATGGAAAAAGCTAACTCATTGTGGGCAGCACCTACCCTAG  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGATTGAATGGAAAAAGCTAACTCATTGTGGGCAGCACCTACCCTAG  1031

seq1  ACAGGTAGCTCTGGGATATAAAGAAAGCCAACTGAGCAAGCTTGAGAAAG  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGTAGCTCTGGGATATAAAGAAAGCCAACTGAGCAAGCTTGAGAAAG  1081

seq1  CAGTACGACATCAGTGGCCTCTGCTTCCTCAGTTCCTGTTTTCAGGTTCT  1146
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTACGACATCAGTGGCCTCTGCTTCCTCAGTTCCTGTTTTCAGGTTCT  1131

seq1  TACCTTCATTTGGTCCATGCCTGGAATTC  1175
      |||||||||||||||||||||||||||||
seq2  TACCTTCATTTGGTCCATGCCTGGAATTC  1160


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