BAC Information

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BAC

Clone NameB6Ng01-185I23
Chromosome17 (Build37)
Map Location 70,787,129 - 70,950,060
singlet/doubletdoublet
Overlap geneDlgap1
Upstream geneA330050F15Rik, LOC100043623, LOC668720, LOC673535, LOC100043630, LOC623112, LOC623143
Downstream geneTgif1, LOC668724, LOC546695, LOC240156, Mylc2b, 2900073G15Rik, Myom1, Lpin2, Emilin2, LOC100043644, Smchd1, LOC100043879, Ndc80, LOC668740, Spdya, LOC623451
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-185I23.bB6Ng01-185I23.g
ACCGA010637GA010638
length9121,104
definitionB6Ng01-185I23.b B6Ng01-185I23.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(70,787,129 - 70,788,030)(70,948,977 - 70,950,060)
sequence
gaattcaacaaggtacaatcttatggatatgtagcactggcctgcagacc
tcccgcactaacctttctgtggcttctgctggctctgccttcaaaaaaga
aataagtaaataaagatttcagagtgagctagtgcgttttttcttgttca
tcaaagtcctgaaaattcctctctcgaaatagaggaatctttggggaaag
gtccttggctgctttgttcttgacaggatagtgggttgtgaggaagtcca
tgatattgatatgaattatggtcttggttgatctttgaccagtttatgtt
attttatagatttagtcaagtatttgtcttcactagcaaacctaagccct
tggtcccctgttatgtaaataagttttgtgtgagatctggtagtagagaa
tactcatgttctcttctggttactaaacatgatattaaagtgtactgtat
taatgtatctaattgaacatcatttgaaaggaaaagtctgtattcaaaag
agccatggtcttgtcttgaagactaatatcaaaagctgagtctgtgacac
attaaagaggctgacactagaggactggaaggttggggctgcaaagaaag
gctctgtttcaaaggaaacaaaaaaaattgaaatgaaaataacaatataa
tgaccacacaaaagtaaatccaagagatttcttattcatatatgaagatc
acaaattaatgacaacattactgtgcgctcgaaatctgggaagaaaatta
ggtgttaaatgtgagatgcgcctacactagctagcttcattttagccaac
ccataatacctaacatattccaaaatagagaatacgtccataaatatgtg
cacttttttgctttgccatttaaaaataagcaatttttaaagaagttgag
aaagtagatata
gaattccctttgttgcttggcaactgtggaagcaggtgctaaggtggagc
tgctgccatgctgagtatgggactgatggcaacaagcagagtctcctgcc
cactggcatacagagcaagagtcaaactgtggagtctggggatcagttat
cagcggagcatagcttagcctgtccttgctggggcgtaagctggaatcag
aaataagttgttcctataacaacaagaatgaaaaaaaaatctcaaagggt
atgcctgcggtttcaggacttgttagttatcagcaaatacttgtcattag
aggctggagaaagtgttcatcaatgttccccagtaagtgaatcattttgc
aaactgttttgtataacctggaggagagatgatgcaagacacggactcat
atcatagtgttaataacatgttggttgctgttggcaacatctgacaagct
atttcatgttaggaaggaaataaataaaggagcaaagggggctcttcttt
caagcagcagtgaaagaattaaatgggttccacatttgagggcttgctgg
actggaaaaaggagccagttttaaaccaacttgtagaaggtaaaacaatc
cctgagaaacttttttttgtttttaaagatttatttattttaacaccatt
gctctcttcagacacaccggaagaggacattggatcccattacagatggt
tgtgagccaccatgtggttgctgggaattgaactcatgacctctggaaga
acaatcaatgctcttaacctctgagccatcgctccagcccccgggaaact
ttgatactgaaaggaaggtgagactcatcgtttctagcaaaagttccatt
ttaaggacacgccctaccctttccccatggcttaacccgtcctgaaagac
tcagagaaaattaagtttgatgcaatgagtctgagagtctctaagaatgg
gagatggtgtggattaggaaggcaaggaaggctccagcctagataggatt
gcatctacgtggatctgttatgacaatcagttctccgaactccactgggg
tcagagaataaaaagggtggcctgcaggattatggggctggtaactggtt
caag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_70787129_70788030
seq2: B6Ng01-185I23.b_47_956

seq1  GAATTCAACAAGGTACAATCTTATGGATATGTAGCACTGGCCTGCAGACC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAACAAGGTACAATCTTATGGATATGTAGCACTGGCCTGCAGACC  50

seq1  TCCCGCACTAACCTTTCTGTGGCTTCTGCTGGCTCTGCCTTCAAAAAAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCGCACTAACCTTTCTGTGGCTTCTGCTGGCTCTGCCTTCAAAAAAGA  100

seq1  AATAAGTAAATAAAGATTTCAGAGTGAGCTAGTGCGTTTTTTCTTGTTCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAGTAAATAAAGATTTCAGAGTGAGCTAGTGCGTTTTTTCTTGTTCA  150

seq1  TCAAAGTCCTGAAAATTCCTCTCTCGAAATAGAGGAATCTTTGGGGAAAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAGTCCTGAAAATTCCTCTCTCGAAATAGAGGAATCTTTGGGGAAAG  200

seq1  GTCCTTGGCTGCTTTGTTCTTGACAGGATAGTGGGTTGTGAGGAAGTCCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCTTGGCTGCTTTGTTCTTGACAGGATAGTGGGTTGTGAGGAAGTCCA  250

seq1  TGATATTGATATGAATTATGGTCTTGGTTGATCTTTGACCAGTTTATGTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATATTGATATGAATTATGGTCTTGGTTGATCTTTGACCAGTTTATGTT  300

seq1  ATTTTATAGATTTAGTCAAGTATTTGTCTTCACTAGCAAACCTAAGCCCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTATAGATTTAGTCAAGTATTTGTCTTCACTAGCAAACCTAAGCCCT  350

seq1  TGGTCCCCTGTTATGTAAATAAGTTTTGTGTGAGATCTGGTAGTAGAGAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTCCCCTGTTATGTAAATAAGTTTTGTGTGAGATCTGGTAGTAGAGAA  400

seq1  TACTCATGTTCTCTTCTGGTTACTAAACATGATATTAAAGTGTACTGTAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTCATGTTCTCTTCTGGTTACTAAACATGATATTAAAGTGTACTGTAT  450

seq1  TAATGTATCTAATTGAACATCATTTGAAAGGAAAAGTCTGTATTCAAAAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGTATCTAATTGAACATCATTTGAAAGGAAAAGTCTGTATTCAAAAG  500

seq1  AGCCATGGTCTTGTCTTGAAGACTAATATCAAAAGCTGAGTCTGTGACAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCATGGTCTTGTCTTGAAGACTAATATCAAAAGCTGAGTCTGTGACAC  550

seq1  ATTAAAGAGGCTGACACTAGAGGACTGGAAGGTTGGGGCTGCAAAGAAAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAAGAGGCTGACACTAGAGGACTGGAAGGTTGGGGCTGCAAAGAAAG  600

seq1  GCTCTGTTTCAAAGGAAACAAAAAAAATTGAAATGAAAATAACAATATAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTGTTTCAAAGGAAACAAAAAAAATTGAAATGAAAATAACAATATAA  650

seq1  TGACCACACAAAAGTAAATCCAAGAGATTTCTTATTCATATATGAAGATC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACCACACAAAAGTAAATCCAAGAGATTTCTTATTCATATATGAAGATC  700

seq1  AC-AATTAATGACAACA-TACTGTGCGCTCGAAATCTGGGAAGAAAA-TA  747
      || |||||||||||||| ||||||||||||||||||||||||||||| ||
seq2  ACAAATTAATGACAACATTACTGTGCGCTCGAAATCTGGGAAGAAAATTA  750

seq1  GGTGTTAAATGTGAGATGCGCCTACACTAGCTAGCTTCA-TTTAGCCAAC  796
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  GGTGTTAAATGTGAGATGCGCCTACACTAGCTAGCTTCATTTTAGCCAAC  800

seq1  CCATAATACCTAACATATTCCAAAATAGAGAATACG-CCATAAATATGTG  845
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  CCATAATACCTAACATATTCCAAAATAGAGAATACGTCCATAAATATGTG  850

seq1  CAC-TTTTTGC-TTGCCAATTAAAAATAAGCAATTTTTAAAGAAG-TGAG  892
      ||| ||||||| |||||| |||||||||||||||||||||||||| ||||
seq2  CACTTTTTTGCTTTGCCATTTAAAAATAAGCAATTTTTAAAGAAGTTGAG  900

seq1  AAAGTAGATA  902
      ||||||||||
seq2  AAAGTAGATA  910

seq1: chr17_70948977_70950060
seq2: B6Ng01-185I23.g_67_1170 (reverse)

seq1  CTTGAA-CAGT--ACAGCCCCATAATCCTGCAGG-CACCCTTTT--ATCT  44
      |||||| ||||   |||||||||||||||||||| |||||||||   |||
seq2  CTTGAACCAGTTACCAGCCCCATAATCCTGCAGGCCACCCTTTTTATTCT  50

seq1  CTGACCCCAGT-GAGTTCGGAGAACTGATTGTCAT-ACAGAATCCACGTA  92
      ||||||||||| ||||||||||||||||||||||| |||| |||||||||
seq2  CTGACCCCAGTGGAGTTCGGAGAACTGATTGTCATAACAG-ATCCACGTA  99

seq1  GATGCAATTCCTATCTAGGCTG--GGCTTCTTTGCCTT-CTTATCCACA-  138
      ||||||| ||||||||||||||  | |||| ||||||| || ||||||| 
seq2  GATGCAA-TCCTATCTAGGCTGGAGCCTTCCTTGCCTTCCTAATCCACAC  148

seq1  CATCTCC--ATCTTAGAGACTCTCAG-CTCATTGCATC-AACTTAA-TTT  183
      |||||||   |||||||||||||||| ||||||||||| ||||||| |||
seq2  CATCTCCCATTCTTAGAGACTCTCAGACTCATTGCATCAAACTTAATTTT  198

seq1  CTCTGAGTCTTTCAGGACGGGTTAAGCCATGGGG-AAGGGTA-GGCGTGT  231
      |||||||||||||||||||||||||||||||||| ||||||| |||||||
seq2  CTCTGAGTCTTTCAGGACGGGTTAAGCCATGGGGAAAGGGTAGGGCGTGT  248

seq1  CCTT-AAATGGAAC-TTTGCTAGAAACGATGAGTCTCACCTTCC-TTCAG  278
      |||| ||||||||| ||||||||||||||||||||||||||||| |||||
seq2  CCTTAAAATGGAACTTTTGCTAGAAACGATGAGTCTCACCTTCCTTTCAG  298

seq1  TATCAAAGTTTCCCGGGGGCTGGAGCGATGGCTCAGAGGTTAAGAGCATT  328
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCAAAGTTTCCCGGGGGCTGGAGCGATGGCTCAGAGGTTAAGAGCATT  348

seq1  GATTGTTCTTCCAGAGGTCATGAGTTCAATTCCCAGCAACCACATGGTGG  378
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTGTTCTTCCAGAGGTCATGAGTTCAATTCCCAGCAACCACATGGTGG  398

seq1  CTCACAACCATCTGTAATGGGATCCAATGTCCTCTTCCGGTGTGTCTGAA  428
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCACAACCATCTGTAATGGGATCCAATGTCCTCTTCCGGTGTGTCTGAA  448

seq1  GAGAGCAATGGTGTTAAAATAAATAAATCTTTAAAAACAAAAAAAAGTTT  478
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGCAATGGTGTTAAAATAAATAAATCTTTAAAAACAAAAAAAAGTTT  498

seq1  CTCAGGGATTGTTTTACCTTCTACAAGTTGGTTTAAAACTGGCTCCTTTT  528
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGGGATTGTTTTACCTTCTACAAGTTGGTTTAAAACTGGCTCCTTTT  548

seq1  TCCAGTCCAGCAAGCCCTCAAATGTGGAACCCATTTAATTCTTTCACTGC  578
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGTCCAGCAAGCCCTCAAATGTGGAACCCATTTAATTCTTTCACTGC  598

seq1  TGCTTGAAAGAAGAGCCCCCTTTGCTCCTTTATTTATTTCCTTCCTAACA  628
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTGAAAGAAGAGCCCCCTTTGCTCCTTTATTTATTTCCTTCCTAACA  648

seq1  TGAAATAGCTTGTCAGATGTTGCCAACAGCAACCAACATGTTATTAACAC  678
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAATAGCTTGTCAGATGTTGCCAACAGCAACCAACATGTTATTAACAC  698

seq1  TATGATATGAGTCCGTGTCTTGCATCATCTCTCCTCCAGGTTATACAAAA  728
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGATATGAGTCCGTGTCTTGCATCATCTCTCCTCCAGGTTATACAAAA  748

seq1  CAGTTTGCAAAATGATTCACTTACTGGGGAACATTGATGAACACTTTCTC  778
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTTGCAAAATGATTCACTTACTGGGGAACATTGATGAACACTTTCTC  798

seq1  CAGCCTCTAATGACAAGTATTTGCTGATAACTAACAAGTCCTGAAACCGC  828
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCTCTAATGACAAGTATTTGCTGATAACTAACAAGTCCTGAAACCGC  848

seq1  AGGCATACCCTTTGAGATTTTTTTTTCATTCTTGTTGTTATAGGAACAAC  878
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCATACCCTTTGAGATTTTTTTTTCATTCTTGTTGTTATAGGAACAAC  898

seq1  TTATTTCTGATTCCAGCTTACGCCCCAGCAAGGACAGGCTAAGCTATGCT  928
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTCTGATTCCAGCTTACGCCCCAGCAAGGACAGGCTAAGCTATGCT  948

seq1  CCGCTGATAACTGATCCCCAGACTCCACAGTTTGACTCTTGCTCTGTATG  978
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGCTGATAACTGATCCCCAGACTCCACAGTTTGACTCTTGCTCTGTATG  998

seq1  CCAGTGGGCAGGAGACTCTGCTTGTTGCCATCAGTCCCATACTCAGCATG  1028
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTGGGCAGGAGACTCTGCTTGTTGCCATCAGTCCCATACTCAGCATG  1048

seq1  GCAGCAGCTCCACCTTAGCACCTGCTTCCACAGTTGCCAAGCAACAAAGG  1078
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGCAGCTCCACCTTAGCACCTGCTTCCACAGTTGCCAAGCAACAAAGG  1098

seq1  GAATTC  1084
      ||||||
seq2  GAATTC  1104