BAC Information

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BAC

Clone NameB6Ng01-185O24
Chromosome17 (Build37)
Map Location 91,031,833 - 91,197,639
singlet/doubletdoublet
Overlap geneNrxn1
Upstream geneLOC100043906
Downstream geneEG668871, LOC668872, LOC627235, LOC100043741, LOC100043742
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-185O24.bB6Ng01-185O24.g
ACCGA010915GA010916
length1,071182
definitionB6Ng01-185O24.b B6Ng01-185O24.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(91,196,606 - 91,197,639)(91,031,833 - 91,032,014)
sequence
gaattccacttgtttgcacactcaggaatcccattaaaacattaagctgg
aagctacaatatatgcgctcttgagtttgttttctgttggctgtctaggg
cagacattaggaactgtttgtttcctcttggattacattaaagttttttt
ttttttttttttttttttttttttaacaagtggatgtggagatagggatg
gaggcatatttatatttttcctttcagctctgggactgtttaggtctgac
acatacctggacacaccctacgaatgctgcctcagtctgtgagtaaattg
atcctgttgatttagaaagctttggttttttggtgtcctccattgcctct
gactcatacactttttctgcctgaaagaggttgtgatgagtcatttttct
gagttaaagtcagagaggaagctagaagtcatgaagtgaaagcccttaga
gaaataaggaacataattgaagtcaaacttgaggaagaactgaagaaatt
gccattgaatggcacattacaccacagtacacaatacaagcaatccagaa
agtatagccaggctttcattcctcctaggaatacccaggccagtgggcag
gtaactggaggaggctggcaggaactctgttcctctgactgaggagactg
ctgaacaagtttcctccaggaacagacttatggcctgagaaatctcatta
aactcttggcttcaaatccttcctataagcataacaaaatagtcttctag
agacatggcattttaccatggctcaaatgactttttggttgcttcctaac
aaaattgaggcaatttacacaatgcccagtcagactgaccaaaacgggag
ctttcacttttttaaataatgatacaaatctaaagaattaccccataaaa
attcacccttcctttttgaaaaaacaagggaactttgcctctaggagggc
cataattggagaacccatcttggtagagctttgctgtaaaatatggaaac
caacttttttcaatgtcatcccttggagattactgggccctggggtttct
attattaatatggtaaatggt
tcagacatttctcaaacacagggatttattggcttgagcaatgttatact
ctctgttgcctccatattatatctagaatactcactagatctggagtatg
tggtgtgtgtctatgtgtgtgtgtctgagagagagaaagagagagagaga
gagaagagaagagaggggagagaggggagagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_91196606_91197639
seq2: B6Ng01-185O24.b_43_1113 (reverse)

seq1  AACATTTA-CATATTATTAATAGAAA-CCCAGG--CCAGT-ATCTC--AA  43
      | |||||| ||||||| ||||||||| ||||||  ||||| |||||  | 
seq2  ACCATTTACCATATTAATAATAGAAACCCCAGGGCCCAGTAATCTCCAAG  50

seq1  GGATGACATTGAAAAAAAGTTGGTT--CATATTTTACAGCAAAGCTCTA-  90
      ||||||||||| |||||||||||||  |||||||||||||||||||||| 
seq2  GGATGACATTG-AAAAAAGTTGGTTTCCATATTTTACAGCAAAGCTCTAC  99

seq1  CAAGAT-GGTTCTC--ATTATGG-CCTCTTAGAG--CAAGTT-CCTTGTT  133
      |||||| |||||||  ||||||| |||| |||||   ||||| |||||||
seq2  CAAGATGGGTTCTCCAATTATGGCCCTCCTAGAGGCAAAGTTCCCTTGTT  149

seq1  TTT--CAAAAGGAA-GGTGAA-TTTTAT-GGGTAATTC-TTAGA-TTGTA  176
      |||   |||||||| |||||| |||||| ||||||||| ||||| |||||
seq2  TTTTCAAAAAGGAAGGGTGAATTTTTATGGGGTAATTCTTTAGATTTGTA  199

seq1  TCATTATTT-AAAAAGTG-AAGCT-CCGTTT--GTCAGTCTGACT-GGCA  220
      ||||||||| |||||||| ||||| ||||||  |||||||||||| ||||
seq2  TCATTATTTAAAAAAGTGAAAGCTCCCGTTTTGGTCAGTCTGACTGGGCA  249

seq1  TTGTGT-AATTGCCTCAATTTTGTTA-GAAGCAACC-AAAAGTCATTTGA  267
      |||||| ||||||||||||||||||| ||||||||| |||||||||||||
seq2  TTGTGTAAATTGCCTCAATTTTGTTAGGAAGCAACCAAAAAGTCATTTGA  299

seq1  GCCATGGTAAAATGCCATGTCTCTAG-AGACTA-TTTGTTATGC-TATAG  314
      |||||||||||||||||||||||||| |||||| |||||||||| |||||
seq2  GCCATGGTAAAATGCCATGTCTCTAGAAGACTATTTTGTTATGCTTATAG  349

seq1  GAAGGATTTG-AGCC-AGAGTTTAATGAGATTTCTCAGGCCATAAGTCTG  362
      |||||||||| |||| ||||||||||||||||||||||||||||||||||
seq2  GAAGGATTTGAAGCCAAGAGTTTAATGAGATTTCTCAGGCCATAAGTCTG  399

seq1  TTCCTGGAGGAAACTTGTTCAGCAGTCTCCTCAGTCAGAGGAACAGAGTT  412
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTGGAGGAAACTTGTTCAGCAGTCTCCTCAGTCAGAGGAACAGAGTT  449

seq1  CCTGCCAGCCTCCTCCAGTTACCTGCCCACTGGCCTGGGTATTCCTAGGA  462
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGCCAGCCTCCTCCAGTTACCTGCCCACTGGCCTGGGTATTCCTAGGA  499

seq1  GGAATGAAAGCCTGGCTATACTTTCTGGATTGCTTGTATTGTGTACTGTG  512
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATGAAAGCCTGGCTATACTTTCTGGATTGCTTGTATTGTGTACTGTG  549

seq1  GTGTAATGTGCCATTCAATGGCAATTTCTTCAGTTCTTCCTCAAGTTTGA  562
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTAATGTGCCATTCAATGGCAATTTCTTCAGTTCTTCCTCAAGTTTGA  599

seq1  CTTCAATTATGTTCCTTATTTCTCTAAGGGCTTTCACTTCATGACTTCTA  612
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCAATTATGTTCCTTATTTCTCTAAGGGCTTTCACTTCATGACTTCTA  649

seq1  GCTTCCTCTCTGACTTTAACTCAGAAAAATGACTCATCACAACCTCTTTC  662
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCCTCTCTGACTTTAACTCAGAAAAATGACTCATCACAACCTCTTTC  699

seq1  AGGCAGAAAAAGTGTATGAGTCAGAGGCAATGGAGGACACCAAAAAACCA  712
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCAGAAAAAGTGTATGAGTCAGAGGCAATGGAGGACACCAAAAAACCA  749

seq1  AAGCTTTCTAAATCAACAGGATCAATTTACTCACAGACTGAGGCAGCATT  762
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTTTCTAAATCAACAGGATCAATTTACTCACAGACTGAGGCAGCATT  799

seq1  CGTAGGGTGTGTCCAGGTATGTGTCAGACCTAAACAGTCCCAGAGCTGAA  812
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTAGGGTGTGTCCAGGTATGTGTCAGACCTAAACAGTCCCAGAGCTGAA  849

seq1  AGGAAAAATATAAATATGCCTCCATCCCTATCTCCACATCCACTTGTTAA  862
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAAAATATAAATATGCCTCCATCCCTATCTCCACATCCACTTGTTAA  899

seq1  AAAAAAAAAAAAAAAAAAAAAAAAAAAAACTTTAATGTAATCCAAGAGGA  912
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAAAAAAAAAAAAAAAAAAAAAAACTTTAATGTAATCCAAGAGGA  949

seq1  AACAAACAGTTCCTAATGTCTGCCCTAGACAGCCAACAGAAAACAAACTC  962
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAACAGTTCCTAATGTCTGCCCTAGACAGCCAACAGAAAACAAACTC  999

seq1  AAGAGCGCATATATTGTAGCTTCCAGCTTAATGTTTTAATGGGATTCCTG  1012
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGCGCATATATTGTAGCTTCCAGCTTAATGTTTTAATGGGATTCCTG  1049

seq1  AGTGTGCAAACAAGTGGAATTC  1034
      ||||||||||||||||||||||
seq2  AGTGTGCAAACAAGTGGAATTC  1071

seq1: chr17_91031833_91032014
seq2: B6Ng01-185O24.g_70_251

seq1  TCAGACATTTCTCAAACACAGGGATTTATTGGCTTGAGCAATGTTATACT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGACATTTCTCAAACACAGGGATTTATTGGCTTGAGCAATGTTATACT  50

seq1  CTCTGTTGCCTCCATATTATATCTAGAATACTCACTAGATCTGGAGTATG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGTTGCCTCCATATTATATCTAGAATACTCACTAGATCTGGAGTATG  100

seq1  TGGTGTGTGTCTATGTGTGTGTGTCTGAGAGAGAGAAAGAGAGAGAGAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGTGTGTCTATGTGTGTGTGTCTGAGAGAGAGAAAGAGAGAGAGAGA  150

seq1  GAGAAGAGAAGAGAGGGGAGAGAGGGGAGAGG  182
      ||||||||||||||||||||||||||||||||
seq2  GAGAAGAGAAGAGAGGGGAGAGAGGGGAGAGG  182