MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-186K10
Chromosome	17 (Build37)
Map Location	12,093,166 - 12,223,477
singlet/doublet	doublet
Overlap gene	Park2
Upstream gene	none
Downstream gene	Agpat4, Tdgf1-ps2, Map3k4, 4732491K20Rik, LOC625753, Plg, Slc22a3, LOC100041192, Slc22a2, Slc22a1, Igf2r, Air, EG635617, Mas1, Mrgprh, Pnldc1, Mrpl18, Tcp1, Acat3, Acat2, Wtap, Sod2
Link	Open Mouse BAC browser

Click to get alignment info.

name	Park2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:50873 MGI:1355296
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Agpat4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:68262 MGI:1915512
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Tdgf1-ps2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:21669 MGI:107366
definition	gene_synonym : Tdgf3 note : teratocarcinoma-derived growth factor, pseudogene 2 pseudo : _no_value

name	Map3k4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:26407 MGI:1346875
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	4732491K20Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:224523 MGI:3026975
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 16 ESTs

name	LOC625753 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:625753
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins pseudo : _no_value

name	Plg (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:18815 MGI:97620
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Slc22a3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:20519 MGI:1333817
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100041192 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041192
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 23 ESTs, 1 Protein pseudo : _no_value

name	Slc22a2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:20518 MGI:1335072
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Slc22a1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:20517 MGI:108111
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Igf2r (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:16004 MGI:96435
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Air (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:104103 MGI:1353471
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG635617 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:635617 MGI:3645097
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 6 Proteins pseudo : _no_value

name	Mas1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:17171 MGI:96918
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Mrgprh (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:80978 MGI:1934134
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Pnldc1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:240023 MGI:2685159
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 13 ESTs, 2 Proteins

name	Mrpl18 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67681 MGI:1914931
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Tcp1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:21454 MGI:98535
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Acat3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:224530 MGI:109182
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Acat2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:110460 MGI:87871
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Wtap (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:60532 MGI:1926395
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Sod2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:20656 MGI:98352
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Park2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118131140 GeneID:50873 MGI:1355296
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : parkin transcript_id : NM_016694.3

name	Agpat4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802840 GeneID:68262 MGI:1915512
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : 1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta) transcript_id : NM_026644.2

name	Map3k4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:93102420 GeneID:26407 MGI:1346875
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : mitogen activated protein kinase kinase kinase 4 transcript_id : NM_011948.2

name	4732491K20Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94401588 GeneID:224523 MGI:3026975
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 16 ESTs product : RIKEN cDNA 4732491K20 gene transcript_id : XM_488795.3

name	Plg (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31982112 GeneID:18815 MGI:97620
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : plasminogen transcript_id : NM_008877.2

name	Slc22a3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:133892398 GeneID:20519 MGI:1333817
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : solute carrier family 22 (organic cation transporter), member 3 transcript_id : NM_011395.2

name	Slc22a2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130849 GeneID:20518 MGI:1335072
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : solute carrier family 22 (organic cation transporter), member 2 transcript_id : NM_013667.2

name	Slc22a1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142370695 GeneID:20517 MGI:108111
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : solute carrier family 22 (organic cation transporter), member 1 transcript_id : NM_009202.3

name	Igf2r (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:133778977 GeneID:16004 MGI:96435
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : insulin-like growth factor 2 receptor transcript_id : NM_010515.2

name	Mas1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142371805 GeneID:17171 MGI:96918
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : MAS1 oncogene transcript_id : NM_008552.3

name	Mrgprh (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:13507681 GeneID:80978 MGI:1934134
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : MAS-related GPR, member H transcript_id : NM_030726.1

name	Pnldc1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149268416 GeneID:240023 MGI:2685159
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 13 ESTs, 2 Proteins product : poly(A)-specific ribonuclease (PARN)-like domain containing 1 transcript_id : XM_139740.8

name	Mrpl18 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142343757 GeneID:67681 MGI:1914931
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : mitochondrial ribosomal protein L18 transcript_id : NM_026310.2

name	Tcp1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802409 GeneID:21454 MGI:98535
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : t-complex protein 1 transcript_id : NM_013686.3

name	Acat3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:112181180 GeneID:224530 MGI:109182
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : acetyl-Coenzyme A acetyltransferase 3 transcript_id : NM_153151.3

name	Acat2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142347821 GeneID:110460 MGI:87871
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : acetyl-Coenzyme A acetyltransferase 2 transcript_id : NM_009338.2

name	Wtap (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:33946270 GeneID:60532 MGI:1926395
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : Wilms' tumour 1-associating protein transcript_id : NM_175394.1

name	Sod2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:76253932 GeneID:20656 MGI:98352
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : superoxide dismutase 2, mitochondrial transcript_id : NM_013671.3

name	Park2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:7710078 GeneID:50873 MGI:1355296
definition	GO_component : GO:0005783 - endoplasmic reticulum [Evidence IEA]; GO:0043005 - neuron projection [Evidence IDA] GO_function : GO:0016874 - ligase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0042417 - dopamine metabolism [Evidence IMP]; GO:0051583 - dopamine uptake [Evidence IMP]; GO:0007612 - learning [Evidence IMP]; GO:0007626 - locomotory behavior [Evidence IMP]; GO:0042415 - norepinephrine metabolism [Evidence IMP]; GO:0019538 - protein metabolism [Evidence IMP]; GO:0006464 - protein modification [Evidence IEA]; GO:0046928 - regulation of neurotransmitter secretion [Evidence IMP]; GO:0050804 - regulation of synaptic transmission [Evidence IMP]; GO:0001964 - startle response [Evidence IMP]; GO:0001963 - synaptic transmission, dopaminergic [Evidence IMP]; GO:0035249 - synaptic transmission, glutamatergic [Evidence IMP] codon_start : 1 note : parkin protein; Partial coding sequence representing amino acids 206-243; Homologous to GI:7710078. Partial coding sequence amino acids 58-178 product : parkin protein_id : NP_057903.1

name	Agpat4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27229064 CCDS:CCDS28389.1 GeneID:68262 MGI:1915512
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0008415 - acyltransferase activity [Evidence IEA] GO_process : GO:0008152 - metabolism [Evidence IEA]; GO:0008654 - phospholipid biosynthesis [Evidence IEA] codon_start : 1 note : lysophosphatidic acid acyltransferase-delta; 1-acylglycerol-3-phosphate O-acyltransferase 1 (lysophosphatidic acid acyltransferase, delta) product : 1-acylglycerol-3-phosphate O-acyltransferase 4 protein_id : NP_080920.2

name	Map3k4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:93102421 GeneID:26407 MGI:1346875
definition	GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0004672 - protein kinase activity [Evidence IEA]; GO:0004674 - protein serine/threonine kinase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0006468 - protein amino acid phosphorylation [Evidence IEA] codon_start : 1 note : MEK kinase 4 product : mitogen activated protein kinase kinase kinase 4 protein_id : NP_036078.2

name	4732491K20Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:51769961 GeneID:224523 MGI:3026975
definition	codon_start : 1 product : hypothetical protein protein_id : XP_488795.1

name	Plg (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31982113 CCDS:CCDS28390.1 GeneID:18815 MGI:97620
definition	GO_component : GO:0005615 - extracellular space [Evidence ISS] GO_function : GO:0005509 - calcium ion binding [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0008233 - peptidase activity [Evidence IEA]; GO:0004283 - plasmin activity [Evidence IEA]; GO:0005515 - protein binding [Evidence ISS]; GO:0004252 - serine-type endopeptidase activity [Evidence IEA] GO_process : GO:0006915 - apoptosis [Evidence IDA]; GO:0007596 - blood coagulation [Evidence IEA]; GO:0042730 - fibrinolysis [Evidence IEA]; GO:0006917 - induction of apoptosis [Evidence IDA]; GO:0046716 - muscle maintenance [Evidence IMP]; GO:0045445 - myoblast differentiation [Evidence IMP]; GO:0016525 - negative regulation of angiogenesis [Evidence TAS]; GO:0043537 - negative regulation of blood vessel endothelial cell migration [Evidence ISS]; GO:0050874 - organismal physiological process [Evidence IEA]; GO:0006508 - proteolysis [Evidence IEA]; GO:0009888 - tissue development [Evidence IEA]; GO:0042246 - tissue regeneration [Evidence IMP] codon_start : 1 exception : mismatches in translation product : plasminogen protein_id : NP_032903.2

name	Slc22a3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6755538 CCDS:CCDS28391.1 GeneID:20519 MGI:1333817
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0005887 - integral to plasma membrane [Evidence TAS]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0015075 - ion transporter activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0015101 - organic cation transporter activity [Evidence ISS]; GO:0031402 - sodium ion binding [Evidence IEA]; GO:0015293 - symporter activity [Evidence IEA]; GO:0005215 - transporter activity [Evidence IEA] GO_process : GO:0006811 - ion transport [Evidence IEA]; GO:0015695 - organic cation transport [Evidence ISS]; GO:0006814 - sodium ion transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 note : solute carrier family 22, member 3; organic cation transporter 3 product : solute carrier family 22 (organic cation transporter), member 3 protein_id : NP_035525.1

name	Slc22a2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:7305499 CCDS:CCDS28392.1 GeneID:20518 MGI:1335072
definition	GO_component : GO:0005887 - integral to plasma membrane [Evidence ISS] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0015101 - organic cation transporter activity [Evidence ISS] [Evidence IDA]; GO:0031402 - sodium ion binding [Evidence IEA]; GO:0015293 - symporter activity [Evidence IEA] GO_process : GO:0006812 - cation transport [Evidence IDA]; GO:0015695 - organic cation transport [Evidence ISS]; GO:0006814 - sodium ion transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 note : solute carrier family 22, member 2; organic cation transporter 2 product : solute carrier family 22 member 2 protein_id : NP_038695.1

name	Slc22a1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31982010 CCDS:CCDS28393.1 GeneID:20517 MGI:108111
definition	GO_component : GO:0005887 - integral to plasma membrane [Evidence ISS] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0015101 - organic cation transporter activity [Evidence IDA]; GO:0031402 - sodium ion binding [Evidence IEA]; GO:0015293 - symporter activity [Evidence IEA] GO_process : GO:0006812 - cation transport [Evidence IDA]; GO:0006814 - sodium ion transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 note : solute carrier family 22, member 1 product : solute carrier family 22 member 1 protein_id : NP_033228.2

name	Igf2r (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:133778978 GeneID:16004 MGI:96435
definition	GO_component : GO:0005768 - endosome [Evidence ISS]; GO:0005764 - lysosome [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]; GO:0005641 - nuclear envelope lumen [Evidence IDA]; GO:0005634 - nucleus [Evidence IDA]; GO:0030140 - trans-Golgi network transport vesicle [Evidence ISS] GO_function : GO:0005520 - insulin-like growth factor binding [Evidence IPI]; GO:0004872 - receptor activity [Evidence IEA]; GO:0005215 - transporter activity [Evidence IEA] GO_process : GO:0006810 - transport [Evidence IEA] codon_start : 1 note : IGF-II/CI-MPR; cation-independent MPR; cation-independent mannose 6-phosphate receptor; mannose-6-phosphate receptor, cation independent product : insulin-like growth factor 2 receptor protein_id : NP_034645.2

name	Mas1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31543241 CCDS:CCDS28394.1 GeneID:17171 MGI:96918
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0001584 - rhodopsin-like receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0050875 - cellular physiological process [Evidence IEA]; GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence IEA]; GO:0000074 - regulation of progression through cell cycle [Evidence IEA]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 product : MAS1 oncogene protein_id : NP_032578.2

name	Mrgprh (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13507682 CCDS:CCDS28395.1 GeneID:80978 MGI:1934134
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 note : G-protein coupled receptor GPR90; G protein-coupled receptor 90 product : MAS-related GPR, member H protein_id : NP_109651.1

name	Pnldc1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149268417 GeneID:240023 MGI:2685159
definition	codon_start : 1 product : poly(A)-specific ribonuclease (PARN)-like domain containing 1 protein_id : XP_139740.6

name	Mrpl18 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13385808 CCDS:CCDS28396.1 GeneID:67681 MGI:1914931
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0005739 - mitochondrion [Evidence IEA]; GO:0030529 - ribonucleoprotein complex [Evidence IEA]; GO:0005840 - ribosome [Evidence IEA] GO_function : GO:0003735 - structural constituent of ribosome [Evidence IEA] GO_process : GO:0006412 - protein biosynthesis [Evidence IEA] codon_start : 1 product : mitochondrial ribosomal protein L18 protein_id : NP_080586.1

name	Tcp1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:110625624 CCDS:CCDS28397.1 GeneID:21454 MGI:98535
definition	GO_component : GO:0005832 - chaperonin-containing T-complex [Evidence IDA]; GO:0005815 - microtubule organizing center [Evidence IDA]; GO:0005720 - nuclear heterochromatin [Evidence IDA]; GO:0000242 - pericentriolar material [Evidence IDA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]; GO:0051082 - unfolded protein binding [Evidence IEA] GO_process : GO:0044267 - cellular protein metabolism [Evidence IEA]; GO:0006457 - protein folding [Evidence IEA] codon_start : 1 note : snoRNA MBI-39; snoRNA MBI-125; t-complex polypeptide 1 product : t-complex protein 1 protein_id : NP_038714.2

name	Acat3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:110625948 CCDS:CCDS28398.1 GeneID:224530 MGI:109182
definition	GO_function : GO:0016740 - transferase activity [Evidence IEA] codon_start : 1 note : acetyl CoA transferase-like product : acetyl-Coenzyme A acetyltransferase 3 protein_id : NP_694791.2

name	Acat2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30348956 GeneID:110460 MGI:87871
definition	GO_function : GO:0003985 - acetyl-CoA C-acetyltransferase activity [Evidence IEA]; GO:0008415 - acyltransferase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] codon_start : 1 exception : mismatches in translation note : t-complex protein 1, related sequence 1 product : acetyl-Coenzyme A acetyltransferase 2 protein_id : NP_033364.1

name	Wtap (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:33946271 GeneID:60532 MGI:1926395
definition	GO_component : GO:0005654 - nucleoplasm [Evidence IDA]; GO:0005634 - nucleus [Evidence IEA] codon_start : 1 product : Wilms' tumour 1-associating protein protein_id : NP_780603.1

name	Sod2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31980762 CCDS:CCDS28399.1 GeneID:20656 MGI:98352
definition	GO_component : GO:0005743 - mitochondrial inner membrane [Evidence IDA]; GO:0005739 - mitochondrion [Evidence IDA] GO_function : GO:0030145 - manganese ion binding [Evidence IEA]; GO:0008383 - manganese superoxide dismutase activity [Evidence IMP] [Evidence IDA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]; GO:0004784 - superoxide dismutase activity [Evidence IEA] GO_process : GO:0001315 - age-dependent response to reactive oxygen species [Evidence ISS]; GO:0006357 - regulation of transcription from RNA polymerase II promoter [Evidence ISS]; GO:0000303 - response to superoxide [Evidence ISS]; GO:0006801 - superoxide metabolism [Evidence ISS] [Evidence IMP] codon_start : 1 note : manganese SOD; manganese superoxide dismutase product : superoxide dismutase 2, mitochondrial protein_id : NP_038699.2

name	LOC625753 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:625753
definition	number : 1 pseudo : _no_value

name	LOC100041192 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149268415 GeneID:100041192
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 23 ESTs, 1 Protein product : similar to NADH dehydrogenase (ubiquinone) 1 beta subcomplex 3 pseudo : _no_value transcript_id : XR_033029.1

name	Air (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:84872146 GeneID:104103 MGI:1353471
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : antisense Igf2r RNA transcript_id : NR_002853.1

name	EG635617 (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:94401589 GeneID:635617 MGI:3645097
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 6 Proteins product : predicted gene, EG635617 pseudo : _no_value transcript_id : XR_002006.1

clone name	MSMg01-109E12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-292E17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-367A18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-385A14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-232A06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-477F05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-540E19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-186C07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-401O11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-494H09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-539J07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-522A11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-349C16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-457N14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-316N19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-521B02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-475H20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-394D03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-460F08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-263A04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-101N03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-479K05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-430P09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-212G11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-547G19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-516L12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-148M05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-071C04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-538J13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-096B14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-301K19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-092N21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-475I12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-292A17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-291K20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-471C07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-444M09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-378F08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-399H14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-320H16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-166L23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-361L03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-318K20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-156H24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-060G09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-153O11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-191J21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-354B07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-294A16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-169J16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-069I15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-435D14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-120J17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-147F10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-301I01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-313D12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-111F12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-363B16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-476H12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-470M19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-167H06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-112J10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-385P13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-173I01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-513A04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-452N01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-543L23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-404K24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-171H02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-527H18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-373K15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-519P23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-485N08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-462G07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-340B24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-532D12
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-196F19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-342F12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-137N04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-150A08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-491N23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-275J09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-073D22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-131K11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-477N15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-525L11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-537M14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-502N18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-306M03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-122M11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-340B23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-227H16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-088H09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-174C17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-246M04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-343F10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-139H05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-263D20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-255A09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-012I21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-138C07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-236J16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-124L15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-299E10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-337P12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-082I22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-205C04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-213H11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-296O21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-276P08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-321B21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-260P05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-261F24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-290F16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-007N06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-325L12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-262K10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-012N06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-069B19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-327D19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-328A19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-155G05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-076N11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-143B18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-251D05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-075B22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-296B14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-116N01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-275O04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-205D17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-292H03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-037F19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-071I15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-042P14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-250G17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-208K15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-299N20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-084C23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-216E18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-023B01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-246E13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-246G14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-046D18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-219J06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-015O13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-186K10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-135C08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-293E12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-214O10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-219J10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-241E11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-028P18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-098H01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-191J15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-045H15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-257K07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-335J01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-234N22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-094H12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-288G10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-211N22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-167F18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-123O15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-079P20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-254J02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-208C09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-252F22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-111M23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-255I10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-196L18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-242J06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-286I09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-282K20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-186M10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-216A14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-203J05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-059G03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-298K23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-270O07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-090H11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-089F21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-263A24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-013K09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-330C18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-228D17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-350E15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-328C09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-346E15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-327G05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-189D19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-116M05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-288C05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-259H24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-137D11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-321K14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-049M15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-102I23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-169A03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-002B16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-217D11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-013K16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-296A03
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-186K10.b	B6Ng01-186K10.g
ACC	GA011435	GA011436
length	1,047	1,166
definition	B6Ng01-186K10.b	B6Ng01-186K10.g
singlet/doublet	doublet	doublet
BLAST hit	unique	unique
Map location.	(12,093,166 - 12,094,214)	(12,222,300 - 12,223,477)
sequence	gaattccaaagcaagaacacacctgtaaagtgcgggcacacacacattct gtggtgctgaattaacacctggactctcagacagtcgtgcaatcatttct tttgttgtctgtgattgcaaactaacagttattagtctatcacggcactt aaaaaaaaaaaaaagatccagcttttaagcccaacatgtacagtgcttct attagcgaagcgttgccatggatacattggatcaaaacttcactccccga aataataatacagaagacattcccttgtgttgaaaggtaggtcatttata tcatctactattgttgaacccttattataaaccaggacctgtctcataca tcggcatgcaaagatgaaaaagtaagtcacagtgcttctggggggcctgt gagggagggggtgtcggcacttactattcagctatagtttaccaaatgct gggaggggttacactgagcagtaagaggtcgaatggccattcctaatagc tcaaccaagaaacctccatccagtatgagtctgtgcatcactgccccctg cctggccattctgcttaatggtatgacttaatggttttgcctagacactt gagtcaaagctgatggccaatgctttaaattcctttgagaggagctggac caacccattcccaggagatgagtgagctttcaaatgccaatgtcaagcag aaagatgccttggcaaaaccatccacgcctaaacaggcctgcttccttag gttgacagagctagaagttcaaagaaaccaaagaatggtcctcccctcta cactgggaggacagctccacatatagcctttatagtgactccctctctcc cctcccctttggcttcagtttcttgattaaaatttaaaaattaccttcct tggatcttgatagcactgaatgaaccatggaaaggccccaagccatgatg gcagcagtcattaggataagcaggcaaagacaagttcccatatttctgag ctctagtgccagtgacctcctggatcgagggcagatgggggcagggg	gaattccaggacagccaaggctgttacatagagaaaccctgtttcagaaa acgaccctaccctcaaacagaaacctcttccttcaaaaatcgcttagtct cagagcagctttctctgttacaatttaggagaataggttatttatgactc gttttttctgttgctgtgaagaacagctggacaaggtaatttacaaaaga agaggtttgcctgagtacaatgagcctctgtttgccctgccagcacatct ttcatggcttctctatagcgcctgacattttaagcatccggccttaaaca acccaagccccacgttttttatcattttgccgtacgctatgacttgtaaa atacttcacataccttctcatttcattatttatagttcagtagatcttac tggccccatgtggcagagaggaaaaagctgtaagcatctgagtgacttgc ctgcaagcgaaagaaagagatcaaacggcttcctctgatggccagcctag ggccctttctgctccagaacaaacctttccaggccggctaagtgctctgt aaatgcaccgctgagagtctggtgctgtcctcggcggttatttagctccc atggacgagatggagggggccatccaggaggatacgccagctttaatgga gatctattgccaccattccgctctgtctgtgcatcagttaggctgtgtcc agcgcggaggaagagcggcaatagagctgtttcactcgaggcaacaggtg actcagtaaatgactcccagatcatggagacaggagaactcactcacggt ctcttaacttggggaacatagttgggtgggtacagagcgtggtaaggaca ctccttcggagacaggccatctcatactttgcttatttggctccagaata gcttcctcctccagaggccctatgcaatctgcttctgaagcccctggaca tttctgtggggacgtccacactgtaactgtggcctcctccaagccctgac tccgccgtttctctctggtgacgttagacttgagcagctagtgacatgct tcactctccagcctgtcttctgctcatccaactttgtgacttccctctga gccttgagcttcctgctggtcaatgaactgctgtatgccttgtccttcta accttcacctttggga
quality values	Open. 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Alignment Information

BAC End 1

BAC End 2

seq1: chr17_12093166_12094214
seq2: B6Ng01-186K10.b_43_1089

seq1  GAATTCCAAAGCAAGAACACACCTGTAAAGTGCGGGCACACACACATTCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAAAGCAAGAACACACCTGTAAAGTGCGGGCACACACACATTCT  50

seq1  GTGGTGCTGAATTAACACCTGGACTCTCAGACAGTCGTGCAATCATTTCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGTGCTGAATTAACACCTGGACTCTCAGACAGTCGTGCAATCATTTCT  100

seq1  TTTGTTGTCTGTGATTGCAAACTAACAGTTATTAGTCTATCACGGCACTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTTGTCTGTGATTGCAAACTAACAGTTATTAGTCTATCACGGCACTT  150

seq1  AAAAAAAAAAAAAAGATCCAGCTTTTAAGCCCAACATGTACAGTGCTTCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAAAAAAAAGATCCAGCTTTTAAGCCCAACATGTACAGTGCTTCT  200

seq1  ATTAGCGAAGCGTTGCCATGGATACATTGGATCAAAACTTCACTCCCCGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAGCGAAGCGTTGCCATGGATACATTGGATCAAAACTTCACTCCCCGA  250

seq1  AATAATAATACAGAAGACATTCCCTTGTGTTGAAAGGTAGGTCATTTATA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAATAATACAGAAGACATTCCCTTGTGTTGAAAGGTAGGTCATTTATA  300

seq1  TCATCTACTATTGTTGAACCCTTATTATAAACCAGGACCTGTCTCATACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCTACTATTGTTGAACCCTTATTATAAACCAGGACCTGTCTCATACA  350

seq1  TCGGCATGCAAAGATGAAAAAGTAAGTCACAGTGCTTCTGGGGGGCCTGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGGCATGCAAAGATGAAAAAGTAAGTCACAGTGCTTCTGGGGGGCCTGT  400

seq1  GAGGGAGGGGGTGTCGGCACTTACTATTCAGCTATAGTTTACCAAATGCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGAGGGGGTGTCGGCACTTACTATTCAGCTATAGTTTACCAAATGCT  450

seq1  GGGAGGGGTTACACTGAGCAGTAAGAGGTCGAATGGCCATTCCTAATAGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGGGGTTACACTGAGCAGTAAGAGGTCGAATGGCCATTCCTAATAGC  500

seq1  TCAACCAAGAAACCTCCATCCAGTATGAGTCTGTGCATCACTGCCCCCTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAACCAAGAAACCTCCATCCAGTATGAGTCTGTGCATCACTGCCCCCTG  550

seq1  CCTGGCCATTCTGCTTAATGGTATGACTTAATGGTTTTGCCTAGACACTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGCCATTCTGCTTAATGGTATGACTTAATGGTTTTGCCTAGACACTT  600

seq1  GAGTCAAAGCTGATGGCCAATGCTTTAAATTCCTTTGAGAGGAGCTGGAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTCAAAGCTGATGGCCAATGCTTTAAATTCCTTTGAGAGGAGCTGGAC  650

seq1  CAACCCATTCCCAGGAGATGAGTGAGCTTTCAAATGCCAATGTCAAGCAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACCCATTCCCAGGAGATGAGTGAGCTTTCAAATGCCAATGTCAAGCAG  700

seq1  AAAGATGCCTTGGCAAAACCATCCACGCCTAAACAGGCCTGCTTCCTTAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGATGCCTTGGCAAAACCATCCACGCCTAAACAGGCCTGCTTCCTTAG  750

seq1  GTTGACAGAGCTAGAAGTTCAAAGAAACCAAAGAATGGTCCTCCCCTCTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGACAGAGCTAGAAGTTCAAAGAAACCAAAGAATGGTCCTCCCCTCTA  800

seq1  CACTGGGAGGACAGCTCCACATATAGCCTTTATAGTGACTCCCTCTCTCC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGGGAGGACAGCTCCACATATAGCCTTTATAGTGACTCCCTCTCTCC  850

seq1  CCTCCCCTTTGGCTTCAGTTTCTTGATTAAAA-TTAAAAATTACC-TCCT  898
      |||||||||||||||||||||||||||||||| |||||||||||| ||||
seq2  CCTCCCCTTTGGCTTCAGTTTCTTGATTAAAATTTAAAAATTACCTTCCT  900

seq1  TGGATCTTGATAGCACTGAAATGAACCATGGAAAAGGCCCCAAGCCATGA  948
      |||||||||||||||||| |||||||||||| ||||||||||||||||||
seq2  TGGATCTTGATAGCACTG-AATGAACCATGG-AAAGGCCCCAAGCCATGA  948

seq1  TGGCAGCAGTCATTAGGATAAGCAGGCAAAGACAAGTTCCCATATTTCTG  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCAGCAGTCATTAGGATAAGCAGGCAAAGACAAGTTCCCATATTTCTG  998

seq1  AGCTCTAGTGCCAGTGACCTCCTGGGATCGAGGGCAGAAGGGGGCGAGGG  1048
      ||||||||||||||||||||||| |||||||||||||| |||||| ||||
seq2  AGCTCTAGTGCCAGTGACCTCCT-GGATCGAGGGCAGATGGGGGC-AGGG  1046

seq1  G  1049
      |
seq2  G  1047

seq1: chr17_12222300_12223477
seq2: B6Ng01-186K10.g_62_1227 (reverse)

seq1  TCCC-AAGGTG-AGGTGAGAA-GACAGAGGCACACAGCAGCTCATTGACA  47
      |||| |||||| |||| |||| |||| ||||| ||||||| |||||||| 
seq2  TCCCAAAGGTGAAGGTTAGAAGGACA-AGGCATACAGCAGTTCATTGAC-  48

seq1  CAGCAGGGAAGGCTCAAGGGCTCAGAGGGGAAAGTCCACAAAGTGGGAAG  97
      |||||||  | |||||| |||||||||||  |||| |||||||| ||| |
seq2  CAGCAGG--AAGCTCAA-GGCTCAGAGGG--AAGT-CACAAAGTTGGATG  92

seq1  GAAGCAGAAGACAGGCTGGGAGAAGTG-AGCATGTCACTAGGCTGCTCAA  146
        ||||||||||||||| |||| |||| |||||||||||| |||||||||
seq2  --AGCAGAAGACAGGCT-GGAG-AGTGAAGCATGTCACTA-GCTGCTCAA  137

seq1  GTCTAACGTCACCAGAAGAGGAAACGGCGGAGTCAGGCTTTGGAGGAGGC  196
      ||||||||||||||| ||| |||||||||||||||||  |||||||||||
seq2  GTCTAACGTCACCAG-AGA-GAAACGGCGGAGTCAGGGCTTGGAGGAGGC  185

seq1  CACAGTTACAGTGTGGACGTCCCCACAGAAATGTCCAGGGGCTTCAGAAG  246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGTTACAGTGTGGACGTCCCCACAGAAATGTCCAGGGGCTTCAGAAG  235

seq1  CAGATTGCATAGGGCCTCTTGGAGGAGGAAGCTATTCTGGAGCCAAATAA  296
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  CAGATTGCATAGGGCCTC-TGGAGGAGGAAGCTATTCTGGAGCCAAATAA  284

seq1  GCAAAGTATGAGATGGCCTGTCTCCGAAGGAGTGTCCTTACCACGCTCTG  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAAGTATGAGATGGCCTGTCTCCGAAGGAGTGTCCTTACCACGCTCTG  334

seq1  TACCCACCCAACTATGTTCCCCAAGTTAAGAGACCGTGAGTGAGTTCTCC  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCCACCCAACTATGTTCCCCAAGTTAAGAGACCGTGAGTGAGTTCTCC  384

seq1  TGTCTCCATGATCTGGGAGTCATTTACTGAGTCACCTGTTGCCTCGAGTG  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTCCATGATCTGGGAGTCATTTACTGAGTCACCTGTTGCCTCGAGTG  434

seq1  AAACAGCTCTATTGCCGCTCTTCCTCCGCGCTGGACACAGCCTAACTGAT  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAGCTCTATTGCCGCTCTTCCTCCGCGCTGGACACAGCCTAACTGAT  484

seq1  GCACAGACAGAGCGGAATGGTGGCAATAGATCTCCATTAAAGCTGGCGTA  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACAGACAGAGCGGAATGGTGGCAATAGATCTCCATTAAAGCTGGCGTA  534

seq1  TCCTCCTGGATGGCCCCCTCCATCTCGTCCATGGGAGCTAAATAACCGCC  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCCTGGATGGCCCCCTCCATCTCGTCCATGGGAGCTAAATAACCGCC  584

seq1  GAGGACAGCACCAGACTCTCAGCGGTGCATTTACAGAGCACTTAGCCGGC  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGACAGCACCAGACTCTCAGCGGTGCATTTACAGAGCACTTAGCCGGC  634

seq1  CTGGAAAGGTTTGTTCTGGAGCAGAAAGGGCCCTAGGCTGGCCATCAGAG  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGAAAGGTTTGTTCTGGAGCAGAAAGGGCCCTAGGCTGGCCATCAGAG  684

seq1  GAAGCCGTTTGATCTCTTTCTTTCGCTTGCAGGCAAGTCACTCAGATGCT  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGCCGTTTGATCTCTTTCTTTCGCTTGCAGGCAAGTCACTCAGATGCT  734

seq1  TACAGCTTTTTCCTCTCTGCCACATGGGGCCAGTAAGATCTACTGAACTA  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGCTTTTTCCTCTCTGCCACATGGGGCCAGTAAGATCTACTGAACTA  784

seq1  TAAATAATGAAATGAGAAGGTATGTGAAGTATTTTACAAGTCATAGCGTA  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATAATGAAATGAGAAGGTATGTGAAGTATTTTACAAGTCATAGCGTA  834

seq1  CGGCAAAATGATAAAAAACGTGGGGCTTGGGTTGTTTAAGGCCGGATGCT  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGCAAAATGATAAAAAACGTGGGGCTTGGGTTGTTTAAGGCCGGATGCT  884

seq1  TAAAATGTCAGGCGCTATAGAGAAGCCATGAAAGATGTGCTGGCAGGGCA  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATGTCAGGCGCTATAGAGAAGCCATGAAAGATGTGCTGGCAGGGCA  934

seq1  AACAGAGGCTCATTGTACTCAGGCAAACCTCTTCTTTTGTAAATTACCTT  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGAGGCTCATTGTACTCAGGCAAACCTCTTCTTTTGTAAATTACCTT  984

seq1  GTCCAGCTGTTCTTCACAGCAACAGAAAAAACGAGTCATAAATAACCTAT  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCAGCTGTTCTTCACAGCAACAGAAAAAACGAGTCATAAATAACCTAT  1034

seq1  TCTCCTAAATTGTAACAGAGAAAGCTGCTCTGAGACTAAGCGATTTTTGA  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCTAAATTGTAACAGAGAAAGCTGCTCTGAGACTAAGCGATTTTTGA  1084

seq1  AGGAAGAGGTTTCTGTTTGAGGGTAGGGTCGTTTTCTGAAACAGGGTTTC  1146
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAGAGGTTTCTGTTTGAGGGTAGGGTCGTTTTCTGAAACAGGGTTTC  1134

seq1  TCTATGTAACAGCCTTGGCTGTCCTGGAATTC  1178
      ||||||||||||||||||||||||||||||||
seq2  TCTATGTAACAGCCTTGGCTGTCCTGGAATTC  1166

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information