BAC Information

Click to search

BAC

Clone NameB6Ng01-186N08
Chromosome17 (Build37)
Map Location 13,739,337 - 13,739,711
singlet/doubletsinglet
Overlap genenone
Upstream geneSlc22a2, Slc22a1, Igf2r, Air, EG635617, Mas1, Mrgprh, Pnldc1, Mrpl18, Tcp1, Acat3, Acat2, Wtap, Sod2, Gpr31c, Tcp10c, Ttll2, Unc93a, Smok2a, Smok2b, LOC667359, LOC100041352, LOC667372, LOC667384, Smok4a
Downstream geneTcte2, Mllt4, LOC100041464, EG635895, EG664821, EG664831, 4930488N24Rik, Dact2, Smoc2, LOC664856
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-186N08.b
ACCGA011575
length369
definitionB6Ng01-186N08.b
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
ataaaagctctctgctgcattctttcgagctatttccagggccacggcac
ttctatctaatattgtcagaggctgtgttgcttcatgcaagaagcgaggg
gcagatggtataatgttgacagatggagatggaaccagacggacttaatt
tgatactttattttcatctcctttatgtaaaaatgatgttctagcaaaag
ataatcacttaggatctcaaaacctcagccagaaaacaaaagggagcctg
agagatgagaccatacagctgaggtaacctgtgtcccacctgaagagaca
gaaggaccgagagatgggggtgggggagattgtgctaaataacatgcttt
ggtctttctattgggaacg
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_13739337_13739711
seq2: B6Ng01-186N08.b_43_417 (reverse)

seq1  CGTTCCCAATAGAAAAGCCAAAGCTTGTTCTTTTGCACAATCTCCCCCAC  50
      |||||||||||||||  ||||||| |||| ||| ||||||||||||||||
seq2  CGTTCCCAATAGAAAGACCAAAGCATGTTATTTAGCACAATCTCCCCCAC  50

seq1  CCCCATCTCTCGGTCCTTCTGTCTCTTCAGGTGGGACACAGGTTACCTCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCATCTCTCGGTCCTTCTGTCTCTTCAGGTGGGACACAGGTTACCTCA  100

seq1  GCTGTATGGTCTCATCTCTCAGGCTCCCTTTTGTTTTCTGGCTGAGGTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTATGGTCTCATCTCTCAGGCTCCCTTTTGTTTTCTGGCTGAGGTTT  150

seq1  TGAGATCCTAAGTGATTATCTTTTGCTAGAACATCATTTTTACATAAAGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGATCCTAAGTGATTATCTTTTGCTAGAACATCATTTTTACATAAAGG  200

seq1  AGATGAAAATAAAGTATCAAATTAAGTCCGTCTGGTTCCATCTCCATCTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGAAAATAAAGTATCAAATTAAGTCCGTCTGGTTCCATCTCCATCTG  250

seq1  TCAACATTATACCATCTGCCCCTCGCTTCTTGCATGAAGCAACACAGCCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAACATTATACCATCTGCCCCTCGCTTCTTGCATGAAGCAACACAGCCT  300

seq1  CTGACAATATTAGATAGAAGTGCCGTGGCCCTGGAAATAGCTCGAAAGAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACAATATTAGATAGAAGTGCCGTGGCCCTGGAAATAGCTCGAAAGAA  350

seq1  TGCAGCAGAGAGCTTTTATGAATTC  375
      |||||||||||||||||||||||||
seq2  TGCAGCAGAGAGCTTTTATGAATTC  375