BAC Information

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BAC

Clone NameB6Ng01-193C06
Chromosome17 (Build37)
Map Location 52,894,283 - 52,895,289
singlet/doubletsinglet
Overlap genenone
Upstream geneSatb1, EG628919, LOC672987, EG328839
Downstream geneKcnh8, LOC668506, EG629036, LOC668512, Efhb, LOC668513, Rab5a, 4921523A10Rik, Pcaf, EG628822, Sgol1, EG629065, 4932415M13Rik, Ck-ps1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-193C06.bB6Ng01-193C06.g
ACCGA016197GA016198
length421995
definitionB6Ng01-193C06.b B6Ng01-193C06.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
tgctccttaggaattccagggatcaatcccataattagcctccaaacgct
gacaccattgcatacactagcaagcgttggctgaaaggaccctgatatag
ctgtctcttctgagactaggctggggcctatcaaacacagaagtggatgc
tcacagtcaactattggatggatcacagggcccccaatggaggagccaga
gaaagtatccaaggagctaaagagatctgcaaccctgtaggtgcaacaac
attatgaactaaccagtaccccggagctcttgactctagctgcatatgta
tcaaaggatggcctagtcggtcatcactggaaagagaggcccattggaca
cgcaaactttatatgccccagtacaggggaatgccagggccaaaaaatgg
gaataggtgggtaggggagtg
gaattcaggagaatttaacaagaaattctgtttactctatttcttatcta
taaactgtttttaatataaaaattgagtctatatttcatgattttcagag
cctagattcttagtagtctaaagtctttcctcccacttatatttcctgaa
aagaaaaaaaaaaacataacattattctgtcttaatgtaattagctttgc
aaaggctttctgatcacagaattctcaaaaatgggagggaagttaacatt
atttttttaagattgaaaaataatcacttgtgaattcagcaaatgttgaa
actttattttttaatgaatttggatttaattaaataaatgtaataaaata
gattaaaatttaaacattatatttaacatttaacataactgtaagaaatt
aatagtggattgaataatttgcaaatgtaccgtaattagtgtctatcagc
agcaaagccagcatttgcgatgtcaccaaccacatctcagctcaaatcca
gcagcttccagccaatgacaggaggagtaaagagaaatgagcattgctat
ctgtgtgcatccgggaagaagggtgtggaaaggggcctgagaccatgatg
agacactgaagacactttgtacagaagttaagaaagatgtaggcagagat
gtgctcattggagtgggtaaaggagagatggctgctctgattctgtaaca
cagcatccaaagagtgatgagataaacactaggtattcctcacacttgtt
tttctaactttactaactccctcatgtttgaaaccatcacattaaaacca
aaggagatacaaccacagtgcttcatcacatgatgttggctcttgtgaag
caggttttaagttcaatcatttaagcatcagctaataaagcattcctccc
tcaaaatcaaaacaaatagattaaacacttatttgataccatgacacttt
caacatctgaggcttctgctagcagctgctatttactctcagcaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_52894283_52895289
seq2: B6Ng01-193C06.g_64_1058

seq1  GAATTCAGGAGAATTTAACAAGAAATTCTGTTTACTCTATTTCTTATCTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGGAGAATTTAACAAGAAATTCTGTTTACTCTATTTCTTATCTA  50

seq1  TAAACTGTTTTTAATATAAAAATTGAGTCTATATTTCATGATTTTCAGAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACTGTTTTTAATATAAAAATTGAGTCTATATTTCATGATTTTCAGAG  100

seq1  CCTAGATTCTTAGTAGTCTAAAGTCTTTCCTCCCACTTATATTTCCTGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAGATTCTTAGTAGTCTAAAGTCTTTCCTCCCACTTATATTTCCTGAA  150

seq1  AAGAAAAAAAAAAACATAACATTATTCTGTCTTAATGTAATTAGCTTTGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAAAAAAAAAACATAACATTATTCTGTCTTAATGTAATTAGCTTTGC  200

seq1  AAAGGCTTTCTGATCACAGAATTCTCAAAAATGGGAGGGAAGTTAACATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGCTTTCTGATCACAGAATTCTCAAAAATGGGAGGGAAGTTAACATT  250

seq1  ATTTTTTTAAGATTGAAAAATAATCACTTGTGAATTCAGCAAATGTTGAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTTTAAGATTGAAAAATAATCACTTGTGAATTCAGCAAATGTTGAA  300

seq1  ACTTTATTTTTTAATGAATTTGGATTTAATTAAATAAATGTAATAAAATA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTATTTTTTAATGAATTTGGATTTAATTAAATAAATGTAATAAAATA  350

seq1  GATTAAAATTTAAACATTATATTTAACATTTAACATAACTGTAAGAAATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTAAAATTTAAACATTATATTTAACATTTAACATAACTGTAAGAAATT  400

seq1  AATAGTGGATTGAATAATTTGCAAATGTACCGTAATTAGTGTCTATCAGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGTGGATTGAATAATTTGCAAATGTACCGTAATTAGTGTCTATCAGC  450

seq1  AGCAAAGCCAGCATTTGCGATGTCACCAACCACATCTCAGCTCAAATCCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAAAGCCAGCATTTGCGATGTCACCAACCACATCTCAGCTCAAATCCA  500

seq1  GCAGCTTCCAGCCAATGACAGGAGGAGTAAAGAGAAATGAGCATTGCTAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGCTTCCAGCCAATGACAGGAGGAGTAAAGAGAAATGAGCATTGCTAT  550

seq1  CTGTGTGCATCCGGGAAGAAGGGTGTGGAAAGGGGCCTGAGACCATGATG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGTGCATCCGGGAAGAAGGGTGTGGAAAGGGGCCTGAGACCATGATG  600

seq1  AGACACTGAAGACACTTTGTACAGAAGTTAAGAAAGATGTAGGCAGAGAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACACTGAAGACACTTTGTACAGAAGTTAAGAAAGATGTAGGCAGAGAT  650

seq1  GTGCTCATTGGAGTGGGTAAAGGAGAGATGGCTGCTCTGATTCTGTAACA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCTCATTGGAGTGGGTAAAGGAGAGATGGCTGCTCTGATTCTGTAACA  700

seq1  CAGCATCCAAAGAGTGATGAGATAAACACTAGGTATTCCTCACACTTGTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCATCCAAAGAGTGATGAGATAAACACTAGGTATTCCTCACACTTGTT  750

seq1  TTTCTAACTTTACTAACTCCCTCATGTTTGAAACCATCACATTAAAACC-  799
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  TTTCTAACTTTACTAACTCCCTCATGTTTGAAACCATCACATTAAAACCA  800

seq1  AAGGAGATACAACCACAGTGCTTCATCACATGATGTTGGCTCTTGTGAAG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAGATACAACCACAGTGCTTCATCACATGATGTTGGCTCTTGTGAAG  850

seq1  CAGGTTTTAAGTTCAATCATTTAAGCATCAGCTAATAAAGCATTCCTCCC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTTTTAAGTTCAATCATTTAAGCATCAGCTAATAAAGCATTCCTCCC  900

seq1  TCAAAAATCAAAAACAAATAAGAATTAAACACTTATTTGATACCATGACA  949
      || |||||| ||||||||||   |||||||||||||||||||||||||||
seq2  TC-AAAATC-AAAACAAATA--GATTAAACACTTATTTGATACCATGACA  946

seq1  CCTTTCAACAATCTTGAGGCTTCTGGCTAAGCCAAGCTTGCCTATTTACT  999
       |||||||| ||| |||||||||| ||| |||  ||||   |||||||||
seq2  -CTTTCAAC-ATC-TGAGGCTTCT-GCT-AGC--AGCT--GCTATTTACT  987

seq1  CTCAGCAA  1007
      ||||||||
seq2  CTCAGCAA  995