BAC Information

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BAC

Clone NameB6Ng01-201O09
Chromosome17 (Build37)
Map Location 56,829,413 - 56,829,787
singlet/doubletsinglet
Overlap geneRanbp3
Upstream genePot1b, Emr4, Zfp119, BC011426, EG433125, BC031441, Ebi3, Ccdc94, Shd, Fsd1, AW049765, Mpnd, Sh3gl1, Chaf1a, Ubxd1, Hdgfrp2, S3-12, 2310076L09Rik, Lrg1, Sema6b, Tnfaip8l1, D17Wsu104e, Dpp9, LOC668573, A230051N06Rik, Fem1a, Ticam1, M6prbp1, Arrdc5, Uhrf1, Jmjd2b, Ptprs, EG668592, Znrf4, Safb2, Safb, 2410015M20Rik, Rpl36, Lonp1, LOC619718, Tmem146
Downstream geneCcpn-ps, AI662250, Ndufa11, Fut4-ps1, Nrtn, Dus3l, Gm546, Rfx2, Acsbg2, 1700061G19Rik, Mllt1, Asah3, Clpp, Alkbh7, Pspn, Gtf2f1, Khsrp, Slc25a41, Slc25a23, Crb3, Dennd1c, Tubb4, Tnfsf9, Cd70, Tnfsf14, C3, Gpr108, Trip10, LOC668635, Vav1, Emr1, EG224916
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-201O09.bB6Ng01-201O09.g
ACCGA022545GA022546
length951370
definitionB6Ng01-201O09.b B6Ng01-201O09.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgtttagttctgtaccccattttaataggtttatttggttct
cttgagtctaacttcttgagttctttgtatatattggtattagccctcta
tcagatttaggattggcaaagatctttccccaatctgttggctgcctttt
tgttttattgacagtgtcctttgccttacagaagctttgcaattttatga
ggccccatgcgacgattcttgatcttacagcacaagccgttggtgttctg
ttcaggagtttgtaccctgtgcctatatgtttgaggctttcctactttct
tctctctaagtttcagggtatctggttttatgtggagttccttgatccac
ttgaacttgaactttgtacaaggagataagaatggatcaatttgccaggc
gtggtggcacacgcctctgtcccagcactcgggaggcagaggcaggcaga
tttctgagttcgaggccaccctggtctacaaagtgagttccaggacatcc
agggctatacagagaaaccctgtctcgaaaaaccaaaaaaaaaaaaaaaa
aaaaaaaagaatggatcgatttgcattcttctacatgctagttgagcctg
caccaatgtgtgggttcatttctgggtcttcaattttattccattgatct
acctgtctgtcattgtaccagtaccatgcagtttttatcacaattgctct
gtagtacagcttgaggtcaggcatggtgattccaccagaggttcttttat
tgttgagaatagtttttgctatcctgggtttttgttattccagatgaatt
tgcaaattgccctatctaactcagtgaagaattgagttgggattttggat
gggggattgcattgaatctgtagattgcttttcggtaggatgggccattt
tactatattaatcctgccaatccatgagcatgggagattcttttcacctt
t
caggacagccagggctacacagagaaaccctgtctcgaaaaacaaaaaaa
acaaacaaaaaaccaaacaaacaaacaaaaatatgaccaaaaggctagaa
agatgactcaaagaaaactgggtattctagaagacaggggttggattctc
agtacctacatggcagctcaccactgtctgaaattctagttctaaaggac
tcaacaccctcttctgatctgcttcaacaccagtcaagcacagggtgcaa
acctatgtgcaggcaaaacacccatatacctaaaataaattactaaaaca
atgaccacccagctaactcaattttgcatacatgagactgtttttgttgt
tggtttttttttcccccccc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_56829413_56829787
seq2: B6Ng01-201O09.g_68_443 (reverse)

seq1  GGGGGGGGAAAAAAAAACCAACAACAAAAACAGTCTCATGTCTGC-TGAT  49
      ||||||||||||||||||||||||||||||||||||||||| |||   ||
seq2  GGGGGGGGAAAAAAAAACCAACAACAAAAACAGTCTCATGTATGCAAAAT  50

seq1  TGAGTTAGCTGGGTGGTCATTGTTTTAGTAATTTATTTTAGGTATATGGG  99
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTTAGCTGGGTGGTCATTGTTTTAGTAATTTATTTTAGGTATATGGG  100

seq1  TGTTTTGCCTGCACATAGGTTTGCACCCTGTGCTTGACTGGTGTTGAAGC  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTGCCTGCACATAGGTTTGCACCCTGTGCTTGACTGGTGTTGAAGC  150

seq1  AGATCAGAAGAGGGTGTTGAGTCCTTTAGAACTAGAATTTCAGACAGTGG  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATCAGAAGAGGGTGTTGAGTCCTTTAGAACTAGAATTTCAGACAGTGG  200

seq1  TGAGCTGCCATGTAGGTACTGAGAATCCAACCCCTGTCTTCTAGAATACC  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCTGCCATGTAGGTACTGAGAATCCAACCCCTGTCTTCTAGAATACC  250

seq1  CAGTTTTCTTTGAGTCATCTTTCTAGCCTTTTGGTCATATTTTTGTTTGT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTTTCTTTGAGTCATCTTTCTAGCCTTTTGGTCATATTTTTGTTTGT  300

seq1  TTGTTTGGTTTTTTGTTTGTTTTTTTTGTTTTTCGAGACAGGGTTTCTCT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTTGGTTTTTTGTTTGTTTTTTTTGTTTTTCGAGACAGGGTTTCTCT  350

seq1  GTGTAGCCCTGGCTGTCCTGGAATTC  375
      ||||||||||||||||||||||||||
seq2  GTGTAGCCCTGGCTGTCCTGGAATTC  376