BAC Information

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BAC

Clone NameB6Ng01-202L11
Chromosome17 (Build37)
Map Location 69,933,452 - 70,149,339
singlet/doubletdoublet
Overlap genenone
Upstream geneEG622645, Epb4.1l3, 2410021H03Rik, Zfp161, C030034I22Rik, A930029G22Rik, A330050F15Rik, LOC100043623, LOC668720, LOC673535
Downstream geneLOC100043630, LOC623112, LOC623143, Dlgap1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-202L11.bB6Ng01-202L11.g
ACCGA023136GA023137
length1,040551
definitionB6Ng01-202L11.b B6Ng01-202L11.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(69,933,452 - 69,934,496)(70,148,783 - 70,149,339)
sequence
gaattctaaatcagtggggttcaaggaaatgaatgcagcaggcttcttag
cactgcatttttccttctgattgtttcggtgttattctgctttcaacttt
ttttttttttgcagttttgtaagtatatgaactgtctttttctggacttt
aaaagaatttataaatatactggtatagaataagacttatttttcacaga
aaggtatgtttgtacatatgtgtacatattatttactacgagtgaagcat
tgattacataaagttttatcgactgtaaatggaaaaaaatcctacttata
gaaataaatcatattgtatctatatcagactatcagaataaattagttgt
gttccaaagtaatttaatgcataaaaagtagaaacaaaataatacgataa
aaaagaggccacatgctctacatagtgtaagttttctagttggtgtaaaa
atacagcctcacttgagaagttatgtggtagggtttcttcttgattcaaa
tttgataacagtggcttctgtttctctgctttacctcctaagagttagtg
ggcatacagaccagcaagtgctctgcatatttagaaatgattttcaggcc
agttttcagtttaatttccagttctatgtattagggatgtgatttcagtt
agccacaaagagatgtgatgtttgttctattttatccccccccccacaca
cccttgtgagcctttctaccaaacacaatggctgcagttgccgtaacttg
gctgtgtctttctgtctcctggactgctgatcattttatatttttatatt
tagcaactatgttaagagtgaccagtccttgcttgggtacctcacagggg
aactttaccttttgtcatgttaattattacccatcttatttgatttcact
tggtgtgttttgcttttctttctttcttcctttctttctttcttctttct
tcattctttcttctttcttctttcttttcttccttttttttagattcaga
ctggattaaatattttatttaaaccggcttttcctatgac

tcttcctgcttccaactgagcactgatacagtaaatatttcatgtctgct
ttatttgtagctttatgggggaaaccactttatgggagaaaatatttgtc
tcagcagccaggcacagagttctgctgtttgcactctatgcttcctgctt
ttcagcctttaactgcctgtgcagactagcactttaaaccctacactgga
ttcttctagttaatttctgaagtgttaggatgtagaagctatcaaagccc
ccacacattcatacccacactcattaacaattacatgtaagttacagata
acaattcacaccaggggaaaaaatcacccgcagaattcaacagctaggga
cacagtcagtcataataatgtaagccacctcacatggagagactcatggc
tctagctgcttatgtagctgaggatggcctagtcggtcatcaatgggagg
agaggcccttggtcctgtgaaggttctatgccctagtataggggagggcc
aggaagcaggagtgggtggattggggagcagggggaactgggagaggata
g
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_69933452_69934496
seq2: B6Ng01-202L11.b_40_1079

seq1  GAATTCTAAATCAGTGGGGTTCAAGGAAATGAATGCAGCAGGCTTCTTAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAAATCAGTGGGGTTCAAGGAAATGAATGCAGCAGGCTTCTTAG  50

seq1  CACTGCATTTTTCCTTCTGATTGTTTCGGTGTTATTCTGCTTTCAACTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGCATTTTTCCTTCTGATTGTTTCGGTGTTATTCTGCTTTCAACTTT  100

seq1  TTTTTTTTTTGCAGTTTTGTAAGTATATGAACTGTCTTTTTCTGGACTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTTTGCAGTTTTGTAAGTATATGAACTGTCTTTTTCTGGACTTT  150

seq1  AAAAGAATTTATAAATATACTGGTATAGAATAAGACTTATTTTTCACAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGAATTTATAAATATACTGGTATAGAATAAGACTTATTTTTCACAGA  200

seq1  AAGGTATGTTTGTACATATGTGTACATATTATTTACTACGAGTGAAGCAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTATGTTTGTACATATGTGTACATATTATTTACTACGAGTGAAGCAT  250

seq1  TGATTACATAAAGTTTTATCGACTGTAAATGGAAAAAAATCCTACTTATA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTACATAAAGTTTTATCGACTGTAAATGGAAAAAAATCCTACTTATA  300

seq1  GAAATAAATCATATTGTATCTATATCAGACTATCAGAATAAATTAGTTGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATAAATCATATTGTATCTATATCAGACTATCAGAATAAATTAGTTGT  350

seq1  GTTCCAAAGTAATTTAATGCATAAAAAGTAGAAACAAAATAATACGATAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCCAAAGTAATTTAATGCATAAAAAGTAGAAACAAAATAATACGATAA  400

seq1  AAAAGAGGCCACATGCTCTACATAGTGTAAGTTTTCTAGTTGGTGTAAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGAGGCCACATGCTCTACATAGTGTAAGTTTTCTAGTTGGTGTAAAA  450

seq1  ATACAGCCTCACTTGAGAAGTTATGTGGTAGGGTTTCTTCTTGATTCAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACAGCCTCACTTGAGAAGTTATGTGGTAGGGTTTCTTCTTGATTCAAA  500

seq1  TTTGATAACAGTGGCTTCTGTTTCTCTGCTTTACCTCCTAAGAGTTAGTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGATAACAGTGGCTTCTGTTTCTCTGCTTTACCTCCTAAGAGTTAGTG  550

seq1  GGCATACAGACCAGCAAGTGCTCTGCATATTTAGAAATGATTTTCAGGCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATACAGACCAGCAAGTGCTCTGCATATTTAGAAATGATTTTCAGGCC  600

seq1  AGTTTTCAGTTTAATTTCCAGTTCTATGTATTAGGGATGTGATTTCAGTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTTCAGTTTAATTTCCAGTTCTATGTATTAGGGATGTGATTTCAGTT  650

seq1  AGCCACAAAGAGATGTGATGTTTGTTCTATTTTATCCCCCCCCCCACACA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCACAAAGAGATGTGATGTTTGTTCTATTTTATCCCCCCCCCCACACA  700

seq1  CCCTTGTGAGCCTTTCTACCAAACACAATGGCTGCAGTTGCCGTAACTTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTGTGAGCCTTTCTACCAAACACAATGGCTGCAGTTGCCGTAACTTG  750

seq1  GCTGTGTCTTTCTGTCTCCTGGACTGCTGATCATTTTATATTTTTATATT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTGTCTTTCTGTCTCCTGGACTGCTGATCATTTTATATTTTTATATT  800

seq1  TAGCAACTATGTTAAGAGTGACCAGTCCTTGCTTGGGTACCTCACAGGGG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCAACTATGTTAAGAGTGACCAGTCCTTGCTTGGGTACCTCACAGGGG  850

seq1  AACTTTACC-TTTGTCATGTTAATTATTACCCATCTTA-TTGATTTCACT  898
      ||||||||| |||||||||||||||||||||||||||| |||||||||||
seq2  AACTTTACCTTTTGTCATGTTAATTATTACCCATCTTATTTGATTTCACT  900

seq1  TGGTGTGTTTTGCTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTC  948
      |||||||||||||||||||||||||||| ||||||||||||| |||||||
seq2  TGGTGTGTTTTGCTTTTCTTTCTTTCTTCCTTTCTTTCTTTC-TTCTTTC  949

seq1  TTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTCTTTCTTTTTTTTTTAGA  998
       ||| ||||||| ||||||| |||||||||||||| |  |||||||||||
seq2  -TTCATTCTTTC-TTCTTTC-TTCTTTCTTTTCTTCC--TTTTTTTTAGA  994

seq1  TTCTAGAACTGAATAAATAATTTATTTAAACCGGCTTTTCCTATGAC  1045
      ||| |||   || |||||| |||||||||||||||||||||||||||
seq2  TTC-AGACTGGATTAAATATTTTATTTAAACCGGCTTTTCCTATGAC  1040


seq1: chr17_70148783_70149339
seq2: B6Ng01-202L11.g_63_619 (reverse)

seq1  CTATCCTCTCCCAGTTCCCCCTGCTCCCCAATCCACCCACTCCTGCTTCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATCCTCTCCCAGTTCCCCCTGCTCCCCAATCCACCCACTCCTGCTTCC  50

seq1  TGGCCCTCCCCTATACTAGGGCATAGAACCTTCACAGGACCAAGGGCCTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCCCTCCCCTATACTAGGGCATAGAACCTTCACAGGACCAAGGGCCTC  100

seq1  TCCTCCCATTGATGACCGACTAGGCCATCCTCAGCTACATAAGCAGCTAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCCCATTGATGACCGACTAGGCCATCCTCAGCTACATAAGCAGCTAG  150

seq1  AGCCATGAGTCTCTCCATGTGAGGTGGCTTACATTATTATGACTGACTGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCATGAGTCTCTCCATGTGAGGTGGCTTACATTATTATGACTGACTGT  200

seq1  GTCCCTAGCTGTTGAATTCTGCGGGTGATTTTTTCCCCTGGTGTGAATTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCCTAGCTGTTGAATTCTGCGGGTGATTTTTTCCCCTGGTGTGAATTG  250

seq1  TTATCTGTAACTTACATGTAATTGTTAATGAGTGTGGGTATGAATGTGTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCTGTAACTTACATGTAATTGTTAATGAGTGTGGGTATGAATGTGTG  300

seq1  GGGGCTTTGATAGCTTCTACATCCTAACACTTCAGAAATTAACTAGAAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGCTTTGATAGCTTCTACATCCTAACACTTCAGAAATTAACTAGAAGA  350

seq1  ATCCAGTGTAGGGTTTAAAGTGCTAGTCTGCACAGGCAGTTAAAGGCTGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCAGTGTAGGGTTTAAAGTGCTAGTCTGCACAGGCAGTTAAAGGCTGA  400

seq1  AAAGCAGGAAGCATAGAGTGCAAACAGCAGAACTCTGTGCCTGGCTGCTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCAGGAAGCATAGAGTGCAAACAGCAGAACTCTGTGCCTGGCTGCTG  450

seq1  AGACAAATATTTTCTCCCATAAAGTGGTTTCCCCCATAAAGCTACAAATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAAATATTTTCTCCCATAAAGTGGTTTCCCCCATAAAGCTACAAATA  500

seq1  AAGCAGACATGAAATATTTACTGTATCAGTGCTCAGTTGGAAGCAGGAAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAGACATGAAATATTTACTGTATCAGTGCTCAGTTGGAAGCAGGAAG  550

seq1  AGAATTC  557
      |||||||
seq2  AGAATTC  557


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