BAC Information

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BAC

Clone NameB6Ng01-203E11
Chromosome17 (Build37)
Map Location 38,801,223 - 38,828,645
singlet/doubletdoublet
Overlap genenone
Upstream geneOlfr118, Olfr119, Scocp, Olfr120, Olfr1558-ps1, Olfr121, Olfr122, Olfr123, Olfr124, Olfr125, LOC672822, Olfr126, Olfr127, Olfr128, Ppia-ps17_697.1, Olfr761, Olfr1552-ps1, LOC100043265, Olfr129, Olfr130, Olfr131, Olfr132, Olfr133, Olfr134, Olfr135, Olfr138, Olfr137, Olfr762-ps1, Olfr136, LOC626985
Downstream geneLOC100043297, LOC100043300, EG668200
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-203E11.bB6Ng01-203E11.g
ACCGA023537GA023538
length8781,102
definitionB6Ng01-203E11.b B6Ng01-203E11.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(38,801,223 - 38,801,848)(38,827,541 - 38,828,645)
sequence
gaattcagggtataatagggattcataagttaataatggtttggttcaag
aagatgtaggaaaggcatggtagatgttgaggtaagcaaactaataattg
ctaagtaatcctacaaaaacctagtttttgtaatttatacatatatatat
atatagtattaagtttaatatgatatatattataaattatatgttatata
tacatacatacatatatatatattattaagtttaatatgatatatattat
aaattatatgttatatatacatatatatatatatatatatatatatatat
atatatatatatatattacatatatatttgtgaaaagatgccttaagagc
ctttaccttcattttgaaaaagccaaacgtatatattttgcactaatctc
catacaattatacttaaaattcccaaaaagcacccactgagctgtcaata
ctcagctgatttctagccccaaatttcaaaatgctttgaaaatcctttga
aaaatgaacagagaaagtattatcgataaaataacctctcaaacatatta
ctgagttcactcatgtttgtcatctacttctgggcatggtgtctgttctt
ttttttttttttttttttttttttttttttgcaattacgtattttcttca
attacatttccaatgttatcccaaaagccacccccccactcccctaccca
cccattcccatattttggccctggcattcccctgtactggggcatataac
gtttgcctgaccaatgggcctctctttccagtgatggccgactaggtcat
cttttgatacatatacagctagggtcaagagctctggggtactggttagt
taataatgttgttcctctgatagggttg
gaattcccataaaaactccaaaccaaattatttacagaccttgtaaatat
atttcttaacaatgtagaagttctagcaacccagaatagcttaaacaatt
tgagacactagagaaattctggaagagtcaccatcccagacttcaaaaca
agtgatttttcaacaacttattcaagtttgagagaactcaactgactcaa
atgaatattaatatacatctattaattgttataattttccacatggaaaa
ttggatatgtttgccattatagtgacttcttaagtctagaattgtaaaca
ttcagtcttagatgggaaaggatctcataggaattgcttgtcctctatga
atacattggtaatgagagcttctgaagcagggggattaattatcttcagt
gacttaggcactggtgagttgccctgttcctgggatcacttcatataaat
aaccatgtgtgtaacactggttaaacacaccctgtcacaaattacaacag
caaccaaagccaaagtctagaaagtatttcttgaggaaaaaattttcctg
ttcaaggaagatagatgtagagagcttgaaatgtgaatgtgaacataatc
tgtcatgtacatgaatgaaacctccaatgaatcacataaacgatgaaaac
aaacaatgatagtactgtatgattataaatgttcatagtgtgaagtcacg
tgcattttcattccagtgtgatcagaatatagtaagtaatagtaagggaa
caatgatgaatctatttggaattctcccaacaagtgatatgatagttaag
gcaaagggtctcaaactgttcgttgtaaaactttaggtgtaaaatgacga
atttacaggggatgcaaatccaaaatatcacaagttaacattacaattca
tagcattacaatttatagttacaaagaggaatgaaaatgcttatgttagt
tggttatcacaaaaatctcctgtatcaatttattcaaggctattcttctt
ccataatatttaatgtaatggttttctttggtggtatttgatccattgga
ctaagtttgtgtggggtaataagcatgatctactatcagttcttctacat
gc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_38801223_38801848
seq2: B6Ng01-203E11.b_47_680

seq1  GAATTCAGGGTATAATAGGGATTCATAAGTTAATAATGGTTTGGTTCAAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGGGTATAATAGGGATTCATAAGTTAATAATGGTTTGGTTCAAG  50

seq1  AAGATGTAGGAAAGGCATGGTAGATGTTGAGGTAAGCAAACTAATAATTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATGTAGGAAAGGCATGGTAGATGTTGAGGTAAGCAAACTAATAATTG  100

seq1  CTAAGTAATCCTACAAAAACCTAGTTTTTGTAATTTATACATATATATAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGTAATCCTACAAAAACCTAGTTTTTGTAATTTATACATATATATAT  150

seq1  ATATAGTATTAAGTTTAATATGATATATATTATAAATTATATGTTATATA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAGTATTAAGTTTAATATGATATATATTATAAATTATATGTTATATA  200

seq1  TACATACATACATATATATATATTATTAAGTTTAATATGATATATATTAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATACATACATATATATATATTATTAAGTTTAATATGATATATATTAT  250

seq1  AAATTATATGTTATATATAC--------ATATATATATATATATATATAT  292
      ||||||||||||||||||||        ||||||||||||||||||||||
seq2  AAATTATATGTTATATATACATATATATATATATATATATATATATATAT  300

seq1  ATATATATATATATATTACATATATATTTGTGAAAAGATGCCTTAAGAGC  342
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATATATATATATTACATATATATTTGTGAAAAGATGCCTTAAGAGC  350

seq1  CTTTACCTTCATTTTGAAAAAGCCAAACGTATATATTTTGCACTAATCTC  392
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTACCTTCATTTTGAAAAAGCCAAACGTATATATTTTGCACTAATCTC  400

seq1  CATACAATTATACTTAAAATTCCCAAAAAGCACCCACTGAGCTGTCAATA  442
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATACAATTATACTTAAAATTCCCAAAAAGCACCCACTGAGCTGTCAATA  450

seq1  CTCAGCTGATTTCTAGCCCCAAATTTCAAAATGCTTTGAAAATCCTTTGA  492
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGCTGATTTCTAGCCCCAAATTTCAAAATGCTTTGAAAATCCTTTGA  500

seq1  AAAATGAACAGAGAAAGTATTATCGATAAAATAACCTCTCAAACATATTA  542
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATGAACAGAGAAAGTATTATCGATAAAATAACCTCTCAAACATATTA  550

seq1  CTGAGTTCACTCATGTTTGTCATCTACTTCTGGGCATGGTGTCTGTTCTT  592
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGTTCACTCATGTTTGTCATCTACTTCTGGGCATGGTGTCTGTTCTT  600

seq1  TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCAA  626
      |||||||||||||||||||||||||||||| |||
seq2  TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGCAA  634

seq1: chr17_38827541_38828645
seq2: B6Ng01-203E11.g_65_1166 (reverse)

seq1  GCATGTAGAAG-ACTGATAGTAGATTCATGCTTATTACCCCACACAAACT  49
      ||||||||||| |||||||||||| |||||||||||||||||||||||||
seq2  GCATGTAGAAGAACTGATAGTAGA-TCATGCTTATTACCCCACACAAACT  49

seq1  TAAGTCCAATTGGATCAAATACCACCAAAGAAAACCATTACATTAAATAT  99
      | ||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  T-AGTCCAA-TGGATCAAATACCACCAAAGAAAACCATTACATTAAATAT  97

seq1  AATGGAAG-AGAATAGCCTTGAATAAATTGATACAGGAGATTTTTGTGAT  148
       ||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  TATGGAAGAAGAATAGCCTTGAATAAATTGATACAGGAGATTTTTGTGAT  147

seq1  AACCAACTAACATAAGCATTTTCATTCCTTCTTTGTAACTATAAATTTGT  198
      |||||||||||||||||||||||||||| |||||||||||||||| ||||
seq2  AACCAACTAACATAAGCATTTTCATTCC-TCTTTGTAACTATAAA-TTGT  195

seq1  AATGCTATGAATTGTAATGTTAACTTGTGATATTTTGGATTTGCATCCCC  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCTATGAATTGTAATGTTAACTTGTGATATTTTGGATTTGCATCCCC  245

seq1  TGTAAATTCGTCATTTTACACCTAAAGTTTTACAACGAACAGTTTGAGAC  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAAATTCGTCATTTTACACCTAAAGTTTTACAACGAACAGTTTGAGAC  295

seq1  CCTTTGCCTTAACTATCATATCACTTGTTGGGAGAATTCCAAATAGATTC  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTGCCTTAACTATCATATCACTTGTTGGGAGAATTCCAAATAGATTC  345

seq1  ATCATTGTTCCCTTACTATTACTTACTATATTCTGATCACACTGGAATGA  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATTGTTCCCTTACTATTACTTACTATATTCTGATCACACTGGAATGA  395

seq1  AAATGCACGTGACTTCACACTATGAACATTTATAATCATACAGTACTATC  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGCACGTGACTTCACACTATGAACATTTATAATCATACAGTACTATC  445

seq1  ATTGTTTGTTTTCATCGTTTATGTGATTCATTGGAGGTTTCATTCATGTA  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTTTGTTTTCATCGTTTATGTGATTCATTGGAGGTTTCATTCATGTA  495

seq1  CATGACAGATTATGTTCACATTCACATTTCAAGCTCTCTACATCTATCTT  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGACAGATTATGTTCACATTCACATTTCAAGCTCTCTACATCTATCTT  545

seq1  CCTTGAACAGGAAAATTTTTTCCTCAAGAAATACTTTCTAGACTTTGGCT  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGAACAGGAAAATTTTTTCCTCAAGAAATACTTTCTAGACTTTGGCT  595

seq1  TTGGTTGCTGTTGTAATTTGTGACAGGGTGTGTTTAACCAGTGTTACACA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTTGCTGTTGTAATTTGTGACAGGGTGTGTTTAACCAGTGTTACACA  645

seq1  CATGGTTATTTATATGAAGTGATCCCAGGAACAGGGCAACTCACCAGTGC  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGTTATTTATATGAAGTGATCCCAGGAACAGGGCAACTCACCAGTGC  695

seq1  CTAAGTCACTGAAGATAATTAATCCCCCTGCTTCAGAAGCTCTCATTACC  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGTCACTGAAGATAATTAATCCCCCTGCTTCAGAAGCTCTCATTACC  745

seq1  AATGTATTCATAGAGGACAAGCAATTCCTATGAGATCCTTTCCCATCTAA  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTATTCATAGAGGACAAGCAATTCCTATGAGATCCTTTCCCATCTAA  795

seq1  GACTGAATGTTTACAATTCTAGACTTAAGAAGTCACTATAATGGCAAACA  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTGAATGTTTACAATTCTAGACTTAAGAAGTCACTATAATGGCAAACA  845

seq1  TATCCAATTTTCCATGTGGAAAATTATAACAATTAATAGATGTATATTAA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCCAATTTTCCATGTGGAAAATTATAACAATTAATAGATGTATATTAA  895

seq1  TATTCATTTGAGTCAGTTGAGTTCTCTCAAACTTGAATAAGTTGTTGAAA  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCATTTGAGTCAGTTGAGTTCTCTCAAACTTGAATAAGTTGTTGAAA  945

seq1  AATCACTTGTTTTGAAGTCTGGGATGGTGACTCTTCCAGAATTTCTCTAG  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCACTTGTTTTGAAGTCTGGGATGGTGACTCTTCCAGAATTTCTCTAG  995

seq1  TGTCTCAAATTGTTTAAGCTATTCTGGGTTGCTAGAACTTCTACATTGTT  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTCAAATTGTTTAAGCTATTCTGGGTTGCTAGAACTTCTACATTGTT  1045

seq1  AAGAAATATATTTACAAGGTCTGTAAATAATTTGGTTTGGAGTTTTTATG  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAATATATTTACAAGGTCTGTAAATAATTTGGTTTGGAGTTTTTATG  1095

seq1  GGAATTC  1105
      |||||||
seq2  GGAATTC  1102