BAC Information

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BAC

Clone NameB6Ng01-203F05
Chromosome17 (Build37)
Map Location 44,140,118 - 44,141,257
singlet/doubletsinglet
Overlap geneDscr1l1
Upstream geneTnfrsf21, LOC100043770, Gpr110, Gpr116, Mep1a, LOC100043332, Pla2g7, Tdrd6, Slc25a27, Cyp39a1
Downstream geneEnpp5, Enpp4, Clic5, Runx2, Supt3h, 4930564C03Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-203F05.bB6Ng01-203F05.g
ACCGA023573GA023574
length1,1571,129
definitionB6Ng01-203F05.b B6Ng01-203F05.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcaactgaggaatacccaagggttgagaagcacctgaaaaaaaa
tgttcaacatccttaatcatcagggaaatgcacatcaaagcaaccctgag
attccacttcacaccagtcagaatggctaagatcaaaaattcaggtgaca
gcagatgctggcgaggatgtggagaaagaggaacactcctccattgttgg
tgggattgcaagctggtacaaccactcattctggtggctcctcagaaaat
tggacatagtactacaggaagatacagcaatacctctcctgggcatatac
ccagaagatgttccaacttgtaataaggacacatgctccactatgttcat
agcagccttatttataatagccaggagctggaaagaacccagatgtccct
caacagaaaaatggatacagaaaatgcagtacatttacacaatggagtac
tactcagcgatgaaaaacaatgaatttatgtaattcctcggcaaatggat
gtatctggaggatatcatcctaagtgaggtaacccagtcataaaagaaca
cacatgatatgcactcactgataagcatatattaacccagaaacttagac
tacccaagatacaatttgtaaaacacatgaaactcaagaagaaggaagac
caaagtgtggatacttcattccttcttagaatggggaacaaaatacccat
ggaaggagttacagagacaaaattcagagctgagacagaaggaaggacca
tccagagactggcccactcagggatccatcccataaacaaccaccaaacc
cagacactattgcaaatgccaacaagattttgctgacaggaccctgatat
agctgtctcttgtgaggttatgccagtgctaggcaaatacagaagtggat
gctcacagtcatcgactggatggaacacagggcccccaatgaaggagcta
gagaaagtacccaaggagttgaagggtctgcaaccctatagaggaacaca
tatgaactaccagtaccccccagagctgtgtctctagtgcatattgtagc
aaagatggctattagcatcatgggaggaggagaccttggtctagagatta
tattgcccagtaacaggggattttcagaccaggaaatgtgaagtgggtgt
gcttgag
gaattcaataaagacagtgttccagattctcagggtggaggtaaggcctg
ctttctcattggtctctcaataattgatgagcacatgtttaggaagtgtt
atgtgaaattaaaaggctaaattctaaataagttccctatcacatccttt
tgaagatgtgcaattggaagtctaatccgttcatttttctacttggttta
tgatcaaagcgaggttgcggatgcagtgtcgaatcctcttacttatttct
ggccatgaaattgaagtggcctcggtgttccttaaagcggcaggcttgag
cagcttttgaaatctaacagggcagttttcctgctttctgaggtttccca
tcagccctgcccctcctcccatttctccttctctacttcactcaggctct
gtttattctttcctgatcaggagacataaaacagggtagacttgaatgct
accaccacatgcaaatttctctcattcgactttcttgatattgaaaataa
aaataattgcctcaatcccctgcccccacccccaggatacaaggtaccta
aacaaaagcctttccaaactgaaacatgacagtcaacaccaccaaaggct
gagctggactgacaaaacccactatggccacagctaacactgagcataac
tttggagcaccattgttgtcttagttagggttttactgctgtgaacagac
accatgaccaaggcaagtcttataaaaagcaacatttaattggggctggc
ttacaggttcagaggttcagtccattatcatcaaggtgggagcatggcag
tatccaggcaggcatggcacaggaggagctgagagttctatgtcttcatc
caaaggctgctagtggaagattgaattccaggcaactagggtgaggatct
tatgcccacaccccacagtgacacacccattccaaccaggtcacacctat
tccaacaaggctaccacctttcagatggtgtcactcctggtcaaggatat
acaaccatcacattgtctacagtgactgatttttattgggaatctatagg
ccagcaatagatgcagctcagcttgcgtatggtctgtcctctatacctcc
cttcataatggctcattctactacagtga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_44140118_44141257
seq2: B6Ng01-203F05.g_61_1189 (reverse)

seq1  TCACTGTAAGTAGAAATGAGCATATATGAAAGGGAGGGTTATAGAGGACA  50
      ||||||| ||||| |||||||   |||| ||||||||  |||||||||||
seq2  TCACTGT-AGTAG-AATGAGCCATTATG-AAGGGAGG--TATAGAGGACA  45

seq1  GAACCATACGCAAGCCTGAGCTGCATCTATTTGCTGGCCTATAGATTCCC  100
      | |||||||||||| |||||||||||||| ||||||||||||||||||||
seq2  G-ACCATACGCAAG-CTGAGCTGCATCTA-TTGCTGGCCTATAGATTCCC  92

seq1  AATTAAAAATTCAGTCACTGTAGACAATTGTGATGGTTTGTATATCCTTG  150
      |||  |||| ||||||||||||||||| |||||||| |||||||||||| 
seq2  AAT--AAAAATCAGTCACTGTAGACAA-TGTGATGG-TTGTATATCCTT-  137

seq1  GACCAGGGAGTGACACCATCTG-AAGGT-GTAGCCTTGTTGGAATAGGTG  198
      ||||| |||||||||||||||| ||||| |||||||||||||||||||||
seq2  GACCA-GGAGTGACACCATCTGAAAGGTGGTAGCCTTGTTGGAATAGGTG  186

seq1  TGACCTGGTTGGAATGGGTGTGTCACTGT-GGGTGTGGGCATAAGATCCT  247
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  TGACCTGGTTGGAATGGGTGTGTCACTGTGGGGTGTGGGCATAAGATCCT  236

seq1  CACCCTAGTTGCCTGGAATTCAATCTTCCACTAGCAGCCTTTGGATGAAG  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCCTAGTTGCCTGGAATTCAATCTTCCACTAGCAGCCTTTGGATGAAG  286

seq1  ACATAGAACTCTCAGCTCCTCCTGTGCCATGCCTGCCTGGATACTGCCAT  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATAGAACTCTCAGCTCCTCCTGTGCCATGCCTGCCTGGATACTGCCAT  336

seq1  GCTCCCACCTTGATGATAATGGACTGAACCTCTGAACCTGTAAGCCAGCC  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCCCACCTTGATGATAATGGACTGAACCTCTGAACCTGTAAGCCAGCC  386

seq1  CCAATTAAATGTTGCTTTTTATAAGACTTGCCTTGGTCATGGTGTCTGTT  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAATTAAATGTTGCTTTTTATAAGACTTGCCTTGGTCATGGTGTCTGTT  436

seq1  CACAGCAGTAAAACCCTAACTAAGACAACAATGGTGCTCCAAAGTTATGC  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGCAGTAAAACCCTAACTAAGACAACAATGGTGCTCCAAAGTTATGC  486

seq1  TCAGTGTTAGCTGTGGCCATAGTGGGTTTTGTCAGTCCAGCTCAGCCTTT  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTGTTAGCTGTGGCCATAGTGGGTTTTGTCAGTCCAGCTCAGCCTTT  536

seq1  GGTGGTGTTGACTGTCATGTTTCAGTTTGGAAAGGCTTTTGTTTAGGTAC  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGGTGTTGACTGTCATGTTTCAGTTTGGAAAGGCTTTTGTTTAGGTAC  586

seq1  CTTGTATCCTGGGGGTGGGGGCAGGGGATTGAGGCAATTATTTTTATTTT  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTATCCTGGGGGTGGGGGCAGGGGATTGAGGCAATTATTTTTATTTT  636

seq1  CAATATCAAGAAAGTCGAATGAGAGAAATTTGCATGTGGTGGTAGCATTC  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATATCAAGAAAGTCGAATGAGAGAAATTTGCATGTGGTGGTAGCATTC  686

seq1  AAGTCTACCCTGTTTTATGTCTCCTGATCAGGAAAGAATAAACAGAGCCT  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCTACCCTGTTTTATGTCTCCTGATCAGGAAAGAATAAACAGAGCCT  736

seq1  GAGTGAAGTAGAGAAGGAGAAATGGGAGGAGGGGCAGGGCTGATGGGAAA  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTGAAGTAGAGAAGGAGAAATGGGAGGAGGGGCAGGGCTGATGGGAAA  786

seq1  CCTCAGAAAGCAGGAAAACTGCCCTGTTAGATTTCAAAAGCTGCTCAAGC  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCAGAAAGCAGGAAAACTGCCCTGTTAGATTTCAAAAGCTGCTCAAGC  836

seq1  CTGCCGCTTTAAGGAACACCGAGGCCACTTCAATTTCATGGCCAGAAATA  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCGCTTTAAGGAACACCGAGGCCACTTCAATTTCATGGCCAGAAATA  886

seq1  AGTAAGAGGATTCGACACTGCATCCGCAACCTCGCTTTGATCATAAACCA  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAAGAGGATTCGACACTGCATCCGCAACCTCGCTTTGATCATAAACCA  936

seq1  AGTAGAAAAATGAACGGATTAGACTTCCAATTGCACATCTTCAAAAGGAT  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAGAAAAATGAACGGATTAGACTTCCAATTGCACATCTTCAAAAGGAT  986

seq1  GTGATAGGGAACTTATTTAGAATTTAGCCTTTTAATTTCACATAACACTT  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGATAGGGAACTTATTTAGAATTTAGCCTTTTAATTTCACATAACACTT  1036

seq1  CCTAAACATGTGCTCATCAATTATTGAGAGACCAATGAGAAAGCAGGCCT  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAAACATGTGCTCATCAATTATTGAGAGACCAATGAGAAAGCAGGCCT  1086

seq1  TACCTCCACCCTGAGAATCTGGAACACTGTCTTTATTGAATTC  1140
      |||||||||||||||||||||||||||||||||||||||||||
seq2  TACCTCCACCCTGAGAATCTGGAACACTGTCTTTATTGAATTC  1129