BAC Information

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BAC

Clone NameB6Ng01-204I07
Chromosome17 (Build37)
Map Location 82,246,551 - 82,344,248
singlet/doubletdoublet
Overlap genenone
Upstream geneC230072F16Rik, LOC675572, EG668830, Tmem178, Thumpd2, LOC100043700, LOC100043704, Slc8a1, EG668832
Downstream geneLOC100043707, LOC625467, LOC668836, EG433141, EG625514
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-204I07.bB6Ng01-204I07.g
ACCGA024446GA024447
length873619
definitionB6Ng01-204I07.b B6Ng01-204I07.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(82,246,551 - 82,247,415)(82,343,635 - 82,344,248)
sequence
gaattcctcagaaaattgtaaatcaatcttcctgcagacccagctatact
actcttgggaatatccccaaaagatgtcccactatgccacaggggcacgt
gtgccactatgttcataatggccttatttgtgatatccagatgcttgaaa
caacctagatgtcccaggacagaagaatggatacagaaaatttggtacat
ttacacaatggaattctacttagttattaagaatgaggacatcctgagtt
ttgcagacaaatggatgtgactagaaaatatcatcctgagtgaggtaatt
cagacccaataggatgtgcatggtatgtactcactaataagtgaatatta
gccaaaaaggaaaaagagtacagaatacccaaagtgcagttcacaaaact
cacaaaggtcaacaggttgaagtgcccaagtgaggacacctcattcccac
ttgggagggagaagagagcaatcactagttgagggagggggacccagttt
tttttttttatctgtggaaaattcctttagaaaaatcagtgttccaaccc
tgggagctgagggtggagaccagaatacaatctgaacctttttcaagctt
aatatttgcaccccactgagagtagaaacaaacaaacatcttgggatctt
tttgaggtagagtttttgttgttgtttttgttagtaaatatcctaaaatg
ataagtaggacaagaaaagatgtgttatttgagggtggctaaaatttagc
cgtgtatttttcaatagtaatgggcacttctgttggaaatttttttttta
tttattatttttaaaaaagatcttttccagccaatgaaaagtttgtgctt
ctaaggtagggtgtgtgtgtgtg
gaattcctgagtgtgcaaaggagtatatttgtgcattccttgggtcttct
cttggactccttttcttctgattgtttgtgttgtcccattctgatttgtt
tttcttatattagtttttatttcattgctatctcttaggaatctatttgt
ttttctaataagagacagaaaaggaaaagatctgggtgggaggagaagga
gtagaggaacttgaaggagtagagggtggggaacatattgtatgagaaaa
atcatattaactaaacatgaataataataataataaatgaatgatggatt
gaagtgaagtcatgcagatgttattgcaaaggcaggaaatatctactact
tgagttgttttcaatccaaagtataaaatatatatactaaatataatata
atataaaataatataatatagatagatagatagatagacagacagacaga
cagacagatgtaatactcttgtgtttctatgacagttaaatgcaaattct
tttgtttttaaatgaaataacttttgatctttaatagctcacaaatcaaa
ataccatactgtgaaaggaagacacgcgaacccttttcccaggtcccaaa
ctccaggcatctcatatca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_82246551_82247415
seq2: B6Ng01-204I07.b_45_915

seq1  ATTCCTCAGAAAATTGTAAATCAATCTTCCTGCAGACCCAGCTATACTAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCTCAGAAAATTGTAAATCAATCTTCCTGCAGACCCAGCTATACTAC  50

seq1  TCTTGGGAATATCCCCAAAAGATGTCCCACTATGCCACAGGGGCACGTGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGGGAATATCCCCAAAAGATGTCCCACTATGCCACAGGGGCACGTGT  100

seq1  GCCACTATGTTCATAATGGCCTTATTTGTGATATCCAGATGCTTGAAACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCACTATGTTCATAATGGCCTTATTTGTGATATCCAGATGCTTGAAACA  150

seq1  ACCTAGATGTCCCAGGACAGAAGAATGGATACAGAAAATTTGGTACATTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTAGATGTCCCAGGACAGAAGAATGGATACAGAAAATTTGGTACATTT  200

seq1  ACACAATGGAATTCTACTTAGTTATTAAGAATGAGGACATCCTGAGTTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAATGGAATTCTACTTAGTTATTAAGAATGAGGACATCCTGAGTTTT  250

seq1  GCAGACAAATGGATGTGACTAGAAAATATCATCCTGAGTGAGGTAATTCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGACAAATGGATGTGACTAGAAAATATCATCCTGAGTGAGGTAATTCA  300

seq1  GACCCAATAGGATGTGCATGGTATGTACTCACTAATAAGTGAATATTAGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCCAATAGGATGTGCATGGTATGTACTCACTAATAAGTGAATATTAGC  350

seq1  CAAAAAGGAAAAAGAGTACAGAATACCCAAAGTGCAGTTCACAAAACTCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAAGGAAAAAGAGTACAGAATACCCAAAGTGCAGTTCACAAAACTCA  400

seq1  CAAAGGTCAACAGGTTGAAGTGCCCAAGTGAGGACACCTCATTCCCACTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGGTCAACAGGTTGAAGTGCCCAAGTGAGGACACCTCATTCCCACTT  450

seq1  GGGAGGGAGAAGAGAGCAATCACTAGTTGAGGGAGGGGGACCCAGTTTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGGGAGAAGAGAGCAATCACTAGTTGAGGGAGGGGGACCCAGTTTTT  500

seq1  TTTTTTTATCTGTGGAAAATTCCTTTAGAAAAATCAGTGTTCCAACCCTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTATCTGTGGAAAATTCCTTTAGAAAAATCAGTGTTCCAACCCTG  550

seq1  GGAGCTGAGGGTGGAGACCAGAATACAATCTGAACCTTTTTCAAGCTTAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGCTGAGGGTGGAGACCAGAATACAATCTGAACCTTTTTCAAGCTTAA  600

seq1  TATTTGCACCCCACTGAGAGTAGAAACAAACAAACATCTTGGGATCTTTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTGCACCCCACTGAGAGTAGAAACAAACAAACATCTTGGGATCTTTT  650

seq1  TGAGGTAGAGTTTTTGTTGTTGTTTTTGTTAGTAAATATCCTAAAATGAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGTAGAGTTTTTGTTGTTGTTTTTGTTAGTAAATATCCTAAAATGAT  700

seq1  AAGTAGGACAAGAAAAGATGTGTTATTTGAGGGTGGCTAAAATTTAGCCG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTAGGACAAGAAAAGATGTGTTATTTGAGGGTGGCTAAAATTTAGCCG  750

seq1  TGTATTTTTCAATAGTAATGGGCAC-TCTGTTGGAAATTTTTTTTT--AT  797
      ||||||||||||||||||||||||| ||||||||||||||||||||   |
seq2  TGTATTTTTCAATAGTAATGGGCACTTCTGTTGGAAATTTTTTTTTTATT  800

seq1  TATTATTTTTAAAAAAGATC-TTTCCAGCC-ATGAAAAGTTTGTGC-TCT  844
      |||||||||||||||||||| ||||||||| ||||||||||||||| |||
seq2  TATTATTTTTAAAAAAGATCTTTTCCAGCCAATGAAAAGTTTGTGCTTCT  850

seq1  AAGGTAGGGTGTGTGTGTGTG  865
      |||||||||||||||||||||
seq2  AAGGTAGGGTGTGTGTGTGTG  871

seq1: chr17_82343635_82344248
seq2: B6Ng01-204I07.g_67_685 (reverse)

seq1  TGATATGAGATGCCTGGAGTTTGGGA-CTGGG-AAAGGGTTCGCGTGTCT  48
      |||||||||||||||||||||||||| ||||| |||||||||||||||||
seq2  TGATATGAGATGCCTGGAGTTTGGGACCTGGGAAAAGGGTTCGCGTGTCT  50

seq1  TCCTTTCACAGTATGGTATTTTGATTTGTGAGCTATT-AAGATC-AAAGT  96
      ||||||||||||||||||||||||||||||||||||| |||||| |||||
seq2  TCCTTTCACAGTATGGTATTTTGATTTGTGAGCTATTAAAGATCAAAAGT  100

seq1  TATTTCATTT-AAAACAAAAGAATTTGCATTTAACTGTCATAGAAACACA  145
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  TATTTCATTTAAAAACAAAAGAATTTGCATTTAACTGTCATAGAAACACA  150

seq1  AGAGTATTACATCTGTCTGTCTGTCTGTCTGTCTATCTATCTATCTATCT  195
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTATTACATCTGTCTGTCTGTCTGTCTGTCTATCTATCTATCTATCT  200

seq1  ATATTATATTATTTTATATTATATTATATTTAGTATATATATTTTATACT  245
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTATATTATTTTATATTATATTATATTTAGTATATATATTTTATACT  250

seq1  TTGGATTGAAAACAACTCAAGTAGTAGATATTTCCTGCCTTTGCAATAAC  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGATTGAAAACAACTCAAGTAGTAGATATTTCCTGCCTTTGCAATAAC  300

seq1  ATCTGCATGACTTCACTTCAATCCATCATTCATTTATTATTATTATTATT  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGCATGACTTCACTTCAATCCATCATTCATTTATTATTATTATTATT  350

seq1  CATGTTTAGTTAATATGATTTTTCTCATACAATATGTTCCCCACCCTCTA  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTTTAGTTAATATGATTTTTCTCATACAATATGTTCCCCACCCTCTA  400

seq1  CTCCTTCAAGTTCCTCTACTCCTTCTCCTCCCACCCAGATCTTTTCCTTT  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTTCAAGTTCCTCTACTCCTTCTCCTCCCACCCAGATCTTTTCCTTT  450

seq1  TCTGTCTCTTATTAGAAAAACAAATAGATTCCTAAGAGATAGCAATGAAA  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTCTCTTATTAGAAAAACAAATAGATTCCTAAGAGATAGCAATGAAA  500

seq1  TAAAAACTAATATAAGAAAAACAAATCAGAATGGGACAACACAAACAATC  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAACTAATATAAGAAAAACAAATCAGAATGGGACAACACAAACAATC  550

seq1  AGAAGAAAAGGAGTCCAAGAGAAGACCCAAGGAATGCACAAATATACTCC  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGAAAAGGAGTCCAAGAGAAGACCCAAGGAATGCACAAATATACTCC  600

seq1  TTTGCACACTCAGGAATTC  614
      |||||||||||||||||||
seq2  TTTGCACACTCAGGAATTC  619