BAC Information

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BAC

Clone NameB6Ng01-205C04
Chromosome17 (Build37)
Map Location 11,226,425 - 11,290,898
singlet/doubletdoublet
Overlap genePark2
Upstream geneQk, LOC675815, Pacrg, LOC100041113
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-205C04.bB6Ng01-205C04.g
ACCGA024896GA024897
length1,204492
definitionB6Ng01-205C04.b B6Ng01-205C04.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(11,226,425 - 11,227,644)(11,290,401 - 11,290,898)
sequence
gaattccatttaatagcctctaaaatgcattcaaatcaaagcatgctttc
catgtgtgattatgcaaagattatggttccacagggttttctagcaagcc
tgaagctctctgtatggttcttaagccagactgcagacacagtggggagg
attctatctgtgtcagttggtgaatgtggttcttaaccctcacagatcca
tcactcctggttgctcacaccccacatggactgaccaagaagtggctggg
gttgaacaggtggcttcaacgggtagtcagctcaaattaatgaacagttg
tggctcttaagacaaagggacaatagcttggtacaaagtagctcaatcct
tgctgcatgaagccctaggtggtatcctagtgcctgctgttgcatcagat
tgagttagtggttccggagaggaagataaaataccagtgtgcaggtggga
gccaagtgttaatgtactattttgagaaaagcagatcacatttattttgg
ttttctgctctaacattgaagtctacttctgacctcaaaggaaataatta
gctattttataagtcattagttatgctgagcagcagttaaaatccagcaa
tatctcatgtattactttagtgcttttcaaaaataattgaaaggaagaca
gtgtgctaacctgttttaaaaatacattctaaaatcaacaattatacctc
gctgagatttaatgctctaaataaaaacactgcctgctgtcgccctaaga
aatacttggaatgtgatatttgaatttgagactctctccatttccagctt
ttcctacaaactggagcaatactgcagtttgaatggacagagtgacagat
cctggacactccctggtgtttgcaaacatcttgaaatcacaaaaatcctt
ttggtggaagaatttacagtataatggcagtgtaatctgtctctaagtag
agttatagctgcatagagagtattattcccttcttttatatatattttta
aactaaataaggcttagagaaaccatggagatgatggagttaattgcatg
accttttgatcctaagctgttctcaccagacagtacccacagtgattcca
ccaccgaggagggaagtgagttacccggatcctgagtgtggcccggttgt
accttccgatgaactttcctacggaagcctcaagagaaaccggtaaagag
aggt

tccttaaaaagggacggggtttcgttttctctctctcttgcttcttgctc
tcttgcttcttgctctcttgcttcttacactcttgctcctgaagatgtaa
gcaataaagttttgccgcagaagattctggtttgttgcgtctttcctggc
cggtcgtgagaacgcgtctaataacagtgggggttggggggggcttcccc
cttataagcaggatctctgagtaaactcgtgggccttgaacagaaaacgt
gtcttggtctccattaaactctcttgcagtctaagtctctttcagcccca
gcctgccccccaggtgtacctggttcatgtagccctcgggccggcataca
acaagctatcactacatgccagacactaaattcttgatttgcattcattg
attcaatcttcactgagaccacctgggaccaccatcatcattgtatcaat
ctgaagacatggacagaaatcgcagacacagcaatggtattg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_11226425_11227644
seq2: B6Ng01-205C04.b_45_1248

seq1  GAATTCCATTTAATAGCCTCTAAAATGCATTCAAATCAAAGCATGCTTTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATTTAATAGCCTCTAAAATGCATTCAAATCAAAGCATGCTTTC  50

seq1  CATGTGTGATTATGCAAAGATTATGGTTCCACAGGGTTTTCTAGCAAGCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTGTGATTATGCAAAGATTATGGTTCCACAGGGTTTTCTAGCAAGCC  100

seq1  TGAAGCTCTCTGTATGGTTCTTAAGCCAGACTGCAGACACAGTGGGGAGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGCTCTCTGTATGGTTCTTAAGCCAGACTGCAGACACAGTGGGGAGG  150

seq1  ATTCTATCTGTGTCAGTTGGTGAATGTGGTTCTTAACCCTCACAGATCCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTATCTGTGTCAGTTGGTGAATGTGGTTCTTAACCCTCACAGATCCA  200

seq1  TCACTCCTGGTTGCTCACACCCCACATGGACTGACCAAGAAGTGGCTGGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTCCTGGTTGCTCACACCCCACATGGACTGACCAAGAAGTGGCTGGG  250

seq1  GTTGAACAGGTGGCTTCAACGGGTAGTCAGCTCAAATTAATGAACAGTTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGAACAGGTGGCTTCAACGGGTAGTCAGCTCAAATTAATGAACAGTTG  300

seq1  TGGCTCTTAAGACAAAGGGACAATAGCTTGGTACAAAGTAGCTCAATCCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTCTTAAGACAAAGGGACAATAGCTTGGTACAAAGTAGCTCAATCCT  350

seq1  TGCTGCATGAAGCCCTAGGTGGTATCCTAGTGCCTGCTGTTGCATCAGAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGCATGAAGCCCTAGGTGGTATCCTAGTGCCTGCTGTTGCATCAGAT  400

seq1  TGAGTTAGTGGTTCCGGAGAGGAAGATAAAATACCAGTGTGCAGGTGGGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTTAGTGGTTCCGGAGAGGAAGATAAAATACCAGTGTGCAGGTGGGA  450

seq1  GCCAAGTGTTAATGTACTATTTTGAGAAAAGCAGATCACATTTATTTTGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAAGTGTTAATGTACTATTTTGAGAAAAGCAGATCACATTTATTTTGG  500

seq1  TTTTCTGCTCTAACATTGAAGTCTACTTCTGACCTCAAAGGAAATAATTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTGCTCTAACATTGAAGTCTACTTCTGACCTCAAAGGAAATAATTA  550

seq1  GCTATTTTATAAGTCATTAGTTATGCTGAGCAGCAGTTAAAATCCAGCAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTATTTTATAAGTCATTAGTTATGCTGAGCAGCAGTTAAAATCCAGCAA  600

seq1  TATCTCATGTATTACTTTAGTGCTTTTCAAAAATAATTGAAAGGAAGACA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTCATGTATTACTTTAGTGCTTTTCAAAAATAATTGAAAGGAAGACA  650

seq1  GTGTGCTAACCTGTTTTAAAAATACATTCTAAAATCAACAATTATACCTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGCTAACCTGTTTTAAAAATACATTCTAAAATCAACAATTATACCTC  700

seq1  GCTGAGATTTAATGCTCTAAATAAAAACACTGCCTGCTGTCGCCCTAAGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGAGATTTAATGCTCTAAATAAAAACACTGCCTGCTGTCGCCCTAAGA  750

seq1  AATACTTGGAATGTGATATTTGAATTTGAGACTCTCTCCATTTCCAGCTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACTTGGAATGTGATATTTGAATTTGAGACTCTCTCCATTTCCAGCTT  800

seq1  TTCCTACAAACTGGAGCAATACTGCAGTTTGAATGGACAGAGTGACAGAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTACAAACTGGAGCAATACTGCAGTTTGAATGGACAGAGTGACAGAT  850

seq1  CCTGGACACTCCCTGGTGTTTGCAAACATCTTGAAATCACAAAAATCCTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGACACTCCCTGGTGTTTGCAAACATCTTGAAATCACAAAAATCCTT  900

seq1  TTGGTGGAAGAATTTACAGTATAATGGCAGTGTAATCTGTCTCTAAGTAA  950
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  TTGGTGGAAGAATTTACAGTATAATGGCAGTGTAATCTGTCTCTAAGT-A  949

seq1  GAGTTATAGCTGCATAGAGAGTA-TATT-CCTTCTTTTATATATATTTTT  998
      ||||||||||||||||||||||| |||| |||||||||||||||||||||
seq2  GAGTTATAGCTGCATAGAGAGTATTATTCCCTTCTTTTATATATATTTTT  999

seq1  AAACTAAAATAAGGCTTTAGAGAAACCATGGAGATGATGGAGTTAAATTG  1048
      ||||| ||||||||| |||||||||||||||||||||||||||| |||||
seq2  AAACT-AAATAAGGC-TTAGAGAAACCATGGAGATGATGGAGTT-AATTG  1046

seq1  CATGACCTTTTGATCCTAAGCTGGTTCTCACCAGAACAGTTACCACAGTG  1098
      |||||||||||||||||||||| ||||||||||| |||||  ||||||||
seq2  CATGACCTTTTGATCCTAAGCT-GTTCTCACCAG-ACAGTACCCACAGTG  1094

seq1  ATTCCACCACCCGAGGGAGGGAAGTGAGTTACCCGGAGTGCTGAGTGTTG  1148
      ||||||||| |||| |||||||||||||||||||||| | |||||||| |
seq2  ATTCCACCA-CCGA-GGAGGGAAGTGAGTTACCCGGA-TCCTGAGTGTGG  1141

seq1  CCCCGGTTTTGTACCTTTCAGATGAAATGTGTTCATAACGGAAGCCCCAA  1198
      ||| |   ||||||| ||| |||||| |   ||| | ||||||||| |||
seq2  CCCGG---TTGTACC-TTCCGATGAACT---TTCCT-ACGGAAGCCTCAA  1183

seq1  GGAAGAAACCGGAAAAGA-AGGT  1220
      |  ||||||||| ||||| ||||
seq2  G--AGAAACCGGTAAAGAGAGGT  1204


seq1: chr17_11290401_11290898
seq2: B6Ng01-205C04.g_67_564 (reverse)

seq1  CAATACCGTTGCTGTGTCTGCGATTTCTGTCCATGTCTTCAGATTGATGC  50
      ||||||| |||||||||||||||||||||||||||||||||||||||| |
seq2  CAATACCATTGCTGTGTCTGCGATTTCTGTCCATGTCTTCAGATTGATAC  50

seq1  AATGATGATGGTGGTCCCAGGTGGTCTCAGTGAAGATTGAATCAATGAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGATGATGGTGGTCCCAGGTGGTCTCAGTGAAGATTGAATCAATGAAT  100

seq1  GCAAATCAAGAATTTAGTGTCTGGCATGTAGTGATAGCTTGTTGTATGCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAATCAAGAATTTAGTGTCTGGCATGTAGTGATAGCTTGTTGTATGCC  150

seq1  GGCCCGAGGGCTACATGAACCAGGTACACCTGGGGGGCAGGCTGGGGCTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCCGAGGGCTACATGAACCAGGTACACCTGGGGGGCAGGCTGGGGCTG  200

seq1  AAAGAGACTTAGACTGCAAGAGAGTTTAATGGAGACCAAGACACGTTTTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAGACTTAGACTGCAAGAGAGTTTAATGGAGACCAAGACACGTTTTC  250

seq1  TGTTCAAGGCCCACGAGTTTACTCAGAGATCCTGCTTATAAGGGGGAAGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCAAGGCCCACGAGTTTACTCAGAGATCCTGCTTATAAGGGGGAAGC  300

seq1  CCCCCCCAACCCCCACTGTTATTAGACGCGTTCTCACGACCGGCCAGGAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCCCAACCCCCACTGTTATTAGACGCGTTCTCACGACCGGCCAGGAA  350

seq1  AGACGCAACAAACCAGAATCTTCTGCGGCAAAACTTTATTGCTTACATCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACGCAACAAACCAGAATCTTCTGCGGCAAAACTTTATTGCTTACATCT  400

seq1  TCAGGAGCAAGAGTGTAAGAAGCAAGAGAGCAAGAAGCAAGAGAGCAAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGAGCAAGAGTGTAAGAAGCAAGAGAGCAAGAAGCAAGAGAGCAAGA  450

seq1  AGCAAGAGAGAGAGAAAACGAAACCCCGTCCCTTTTTAAGGAGAATTC  498
      ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAAGAGAGAGAGAAAACGAAACCCCGTCCCTTTTTAAGGAGAATTC  498


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