BAC Information

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BAC

Clone NameB6Ng01-206A20
Chromosome17 (Build37)
Map Location 39,831,566 - 39,832,028
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100043297, LOC100043300, EG668200
Downstream geneLOC672857, LOC627695, LOC634967, Pgk2, Crisp3, Crisp1, LOC668229, LOC100043756, EG433107
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-206A20.bB6Ng01-206A20.g
ACCGA025567GA025568
length910892
definitionB6Ng01-206A20.b B6Ng01-206A20.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttgtttagctctgtaccccatttttaatggggttatctgaatg
tctggagtccagcttcttgagttctttctatatattggatattagttccc
tatcagatttaggatgggtaaagatcctttcccaatatgttggtggcctt
tttgtcttattgacagtgtcttttgccttacagaagctttgcaattttat
aaggtcccatttgtcaattctcaatcttacagcacaagccattgctgttc
tgttcaggaatttttactctgtgcccctatcttcgaggcttttccccact
ttcttctctattaattgcattggatctgtagattgcttttggcaagacag
ccatctttcctatattaatcctgccaatccatgagtatgggagatctttc
cattatctgagatattcttccatttctttcttaattgacctaatgttctt
atcatacagatctttcacttccttagttagagtcacaccaaggtatttat
attatttctgactattgtgaaaggtgttgtttaccaaatttctttctcag
cctgtttctcctttgtgtagagaaaggcaagatttctctgagttaatttt
atattcagccactgcactgaagctgtttatcaggtttaggagttctctgg
tggaatttttagggtcacttatatatactatcatatcatcggcaaagagt
gatattttgacttcttcctttctaatttgtatcccctttatctccttttg
tttgtcaaaaatttctggccaggactttaagcactgtattgaataggtag
ggagaaagtggccagccttgtcttagtccctgaatattagtgggattgct
tcaagtttctgtaatttagtttgatgttggctactggtttgctgtgtact
gcttttatta

gaattctttttttatccctgaaccccatttttaatggggttatttatttt
tctggagtccaccttcttgagtttgttatataatttggatattagtcccc
tatatgatttagggtaggtaaagatcctttcccaatctgttggtggcctt
tttgtcttattaacagtttcttttgcttaacagaagctttgcaattttat
gaggttccatttgttgattctcgatcttacagcacaagccattgctgttc
tattcaggaatttttcccctgtgcccatatcttcgaggcttttacccact
ttatcctctataagtttcagtgtctctggttttatgtggagttccttgat
ccactttgatttgacattagtacaaggagatagaaattgatcaatttgta
ttcttctacatgataaccaccagctgtgccagcaccatttgttgaaaatg
atgtctttttatccagtggatggttttagctctcttgtcaaagatcaagt
gaccttggtgtgtgggttcatttgtgggtcttcaattctattccattggc
ctacttgtctgtcgctataccagtaccctgcagtttttatcacaattgct
ctgtagtacagctttaggttaggcatggtgattccaccacaggttctttt
atccttgagaagagtttttggtaccctaggtttttcttattccagatgaa
tttgcagattgccctttttaattcattgaaaaattgagttgaaattttga
tggggattgcattgactctgtaattgctttttgcaagatagccattttta
ctatattggatcctgccaatccatgagcatgggatccatcttccgagaat
cctctttaatttctttctttcagagacttggagttcttatca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_39831566_39832028
seq2: B6Ng01-206A20.b_496_957 (reverse)

seq1  TAATAAAAGCAATCTACAGCAAACCAGTAGCCAACATCAAAGTAAATGGA  50
      ||||||||||| |  |||||||||||||||||||||||||| |||||  |
seq2  TAATAAAAGCAGTACACAGCAAACCAGTAGCCAACATCAAACTAAAT-TA  49

seq1  GAGAAGCTGGAGGCAATCCCACTAA-AATCAGGGACT-AGACAAGGCTGC  98
       |||| || || ||||||||||||| | ||||||||| ||||||||||| 
seq2  CAGAAACTTGAAGCAATCCCACTAATATTCAGGGACTAAGACAAGGCTGG  99

seq1  CCACTTTCACCCTACCTTTTCAACATAGTACTTGAAGTATTAGCCAGAGC  148
      |||||||| |||||||| ||||| | ||| ||| ||||  | ||||||  
seq2  CCACTTTCTCCCTACCTATTCAATACAGTGCTTAAAGTCCTGGCCAGAAA  149

seq1  AATTCAAC-AACAAAAGGAGATCAAGGGGATACAAATTGGAAAAGAGGAA  197
        ||  || ||||||||||||| ||||||||||||||| |||| || |||
seq2  TTTTTGACAAACAAAAGGAGATAAAGGGGATACAAATTAGAAAGGAAGAA  199

seq1  CTCAAAATATCACTTTTTGCAGATGATAAGATAGTATATATAAGTGACCC  247
       ||||||||||||| ||||| ||||||| |||||||||||||||||||||
seq2  GTCAAAATATCACTCTTTGCCGATGATATGATAGTATATATAAGTGACCC  249

seq1  TAAAAATTCCACCAGAGAACTCCTAAACCTGATAAACAGCTTCGGTGAAG  297
      ||||||||||||||||||||||||||||||||||||||||||| ||| ||
seq2  TAAAAATTCCACCAGAGAACTCCTAAACCTGATAAACAGCTTCAGTGCAG  299

seq1  TAGCTGGATATAAAATTAACTCAAAAAAGTCAATGGCCTTTCTCTACACA  347
      | |||| |||||||||||||||| | || ||  | |||||||||||||||
seq2  TGGCTGAATATAAAATTAACTCAGAGAAATC--TTGCCTTTCTCTACACA  347

seq1  AAGAATAAACAGGCTGAGAAAGAAATTAGGGAAACAACACCCTTTTCAAT  397
      ||| | ||||||||||||||||||||| || |||||||||| ||  ||||
seq2  AAGGAGAAACAGGCTGAGAAAGAAATTTGGTAAACAACACCTTTCACAAT  397

seq1  AGTCACAAATAATATAAAATATCTCGGCGTGACTCTAACTAAGGAAGTGA  447
      ||||| ||||||||| ||||| || || ||||||||||||||||||||||
seq2  AGTCAGAAATAATAT-AAATACCTTGGTGTGACTCTAACTAAGGAAGTGA  446

seq1  AAGATCTGTATGATAA  463
      ||||||||||||||||
seq2  AAGATCTGTATGATAA  462


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