BAC Information

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BAC

Clone NameB6Ng01-206G16
Chromosome17 (Build37)
Map Location 22,892,621 - 22,893,376
singlet/doubletsinglet
Overlap genenone
Upstream gene4930515G13Rik, 2610036F08Rik, LOC624960, 3110048L19Rik, 4930432O21Rik, LOC665820, LOC665825, LOC674332, LOC631010, EG665844, EG210853, LOC671007, EG240038, EG631624, 6330416L07Rik, Zfp758, 1300003B13Rik, EG210876, LOC100042656, EG628185, ENSMUSG00000046088, EG383218, EG433078
Downstream geneLOC100042679, A630033E08Rik, LOC671128, LOC665961, EG434701, LOC665976, LOC100042225, LOC100042234, EG665988, LOC100042248, Zfp40, LOC100042257, LOC100042261, Vmn2r-ps133, EG666002, EG638102, EG619697, EG619775, EG619788, Olfr752-ps1, EG666030, EG381070, Zfp213, Zfp13, Zscan10, LOC666062, Mmp25, LOC665757, BC038613, Thoc6, Hcfc1r1, Tnfrsf12a, Cldn6, Cldn9, EG666080, 1520401A03Rik, Pkmyt1, Paqr4, Kremen2, 9530082P21Rik, Flywch1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-206G16.bB6Ng01-206G16.g
ACCGA025835GA025836
length1,2171,163
definitionB6Ng01-206G16.b B6Ng01-206G16.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctcacaaaaggctgaggaaataatgaggataatgcacaatgtgaa
tatcacaatctactgagatagaaatataaggaattctcagtctgaaatga
aacaggaagtgaagaactcagtgagcctgataataactctatagagaacc
tatccatcaaattgtaggatgtcaggagccataatgggattagctaataa
ctagcaggtgatcatcctaaaatggcctgcttcagattattatataatct
gtgacatgtgtgccctaattaagcaaggctgtaagtgattcattttagga
gtgattcatgctattaatatgcttttcctgctattattaaacacatataa
caatcactaagtagtagcacacccctttggaacaaatctctgcagatcca
caaagatgtactatcttgtagtaatgccatacagacaaataaatgactta
agtcttaatgatgatcctataagaatttctaaaattatatttgtgatcat
taagctcttttacaacagggctgctattaggccattttctgatagtcaaa
gctacaatgagaactctgccagtctcccaagtgtcaccagttcattgctc
ttagatggtaaccagagtttctcctattcagaagacattccaagaggttg
taaaacaattaactaaggtcataagggaactaacaatttattataggtgc
taggacagaagataaaatattgacggtttgtctatacaaaacttcactaa
taacttagttatggctttaaaccttcagtgaaactgtgaagctgagacag
gtgatggatgtttagccagataattactcctaatggatatgaatgtaaac
attctctgttgtaaacttctatttcaatttatgatttgatttttgtgtga
agttgtgaactttgtaatatgtgatcatgtattctgaaagatgttatagt
actgaggacaaaagagatgagagattgagagagatgattttttttttttt
ttgcctttccccacttagactagattttttccttttctacctagagattt
ttccattccccacttttccctagatagctttcatagacttttacagctag
taatactctacaatcacttctctagctctttccttcctgcacttctgact
agcagcctgagtgaatcgaagttctgtcttgatagagaagctgcatggct
ctaattccccctctgtt
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtatggcggttcctca
ggaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactggtaaggaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaacgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctaggcaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
ggaactcacacaatatgtactcactggtaagtggatattagccccaaacc
taggatacccaagatataagatacaatttgctaaacacatgaaactcaag
aagaatgaagactgaagtgtggacactatgcccctccttagaattgggaa
caaaacacccatggaaggagttacaaagacaaagtttggagctgagatga
aaggatggaccgtgtagagactgccatatccagggatccaccccataatc
agcatccaaacgctgacaccattgcatatactagcaagattttatcgaaa
ggacccagatgtagctgtctcttgtgagactatgccggggcctagcaaac
atagaagtggatgctcacagtcagctaatggatggatcacagggcttcca
tggaggagctacagaaagtacccaaagagctaaagggatctgcacctata
gatggaacaacaagtatgactaccagttccccggagctcttgacctctta
gctgcatatgtatcaaagatgcctagtcgccatcactgaagagaggtcat
ggaacgaaactttatatggccagtaaggctcgtcagccaaatatgcattg
tctggcttaggca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_22892621_22893376
seq2: B6Ng01-206G16.b_533_1260

seq1  TTTGTGATCATTAAGCTCTTTTACAACAGGGCTGCTATTAGGCCATTTTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTGATCATTAAGCTCTTTTACAACAGGGCTGCTATTAGGCCATTTTC  50

seq1  TGATAGTCAAAGCTACAATGAGAACTCTGCCAGTCTCCCAAGTGTCACCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATAGTCAAAGCTACAATGAGAACTCTGCCAGTCTCCCAAGTGTCACCA  100

seq1  GTTCATTGCTCTTAGATGGTAACCAGAGTTTCTCCTATTCAGAAGACATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCATTGCTCTTAGATGGTAACCAGAGTTTCTCCTATTCAGAAGACATT  150

seq1  CCAAGAGGTTGTAAAACAATTAACTAAGGTCATAAGGGAACTAACAATTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGAGGTTGTAAAACAATTAACTAAGGTCATAAGGGAACTAACAATTT  200

seq1  ATTATAGGTGCTAGGACAGAAGATAAAATATTGACGGTTTGTCTATACAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATAGGTGCTAGGACAGAAGATAAAATATTGACGGTTTGTCTATACAA  250

seq1  AACTTCACTAATAACTTAGTTATGGCTTTAAACCTTCAGTGAAACTGTGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTCACTAATAACTTAGTTATGGCTTTAAACCTTCAGTGAAACTGTGA  300

seq1  AGCTGAGACAGGTGATGGATGTTTAGCCAGATAATTACTCCTAATGGATA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGAGACAGGTGATGGATGTTTAGCCAGATAATTACTCCTAATGGATA  350

seq1  TGAATGTAAACATTCTCTGTTGTAAACTTCTATTTCAATTTATGATTTGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATGTAAACATTCTCTGTTGTAAACTTCTATTTCAATTTATGATTTGA  400

seq1  TTTTTGTGTGAAGTTGTGAACTTTGTAATATGTGATCATGTATTCTGAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTGTGTGAAGTTGTGAACTTTGTAATATGTGATCATGTATTCTGAAA  450

seq1  GATGTATAAGTACTGAGGACAAAAAGAGATGAGGAGAATTGAGAGAGATG  500
      |||||   |||||||||||| ||||||||||| ||| |||||||||||||
seq2  GATGTTATAGTACTGAGGAC-AAAAGAGATGA-GAG-ATTGAGAGAGATG  497

seq1  A-TTTTTTTTTTTTTTGCCTTTCCCCACTTAGACTAGAATTTTTTCCTTT  549
      | ||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  ATTTTTTTTTTTTTTTGCCTTTCCCCACTTAGACTAG-ATTTTTTCCTTT  546

seq1  TCCTTACCTAGAAGAATTTTTCCCATTCCCCACTTTTCCCCTTAGATAGC  599
      ||  ||||||| |||  |||| ||||||||||||||||||  ||||||||
seq2  TC--TACCTAG-AGA--TTTTTCCATTCCCCACTTTTCCC--TAGATAGC  589

seq1  TTTCATAGGAACCTTTTTACAGCTTAGTAATAAATTCTACAATCACTTCT  649
      ||||||||  ||  ||||||||| |||||||  | |||||||||||||||
seq2  TTTCATAG--AC--TTTTACAGC-TAGTAAT--ACTCTACAATCACTTCT  632

seq1  CTAAGTGTCTTCTCTTCCTGCAACTTCTGACTAGCAGGCTGAAAGTTAGA  699
      |||    ||||  |||||||| ||||||||||||||| |||  |||  ||
seq2  CTA--GCTCTTTCCTTCCTGC-ACTTCTGACTAGCAGCCTG--AGT--GA  675

seq1  ACCCAGCAGTTCCTGCTGAGATAGAAGAAAGGCTGCATTG--CTTATTCC  747
      | |  | |||| |||    ||||| ||||  ||||||| |  || |||||
seq2  ATC--GAAGTT-CTGTCTTGATAG-AGAA--GCTGCATGGCTCTAATTCC  719

seq1  CCCTCTGTT  756
      |||||||||
seq2  CCCTCTGTT  728