BAC Information

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BAC

Clone NameB6Ng01-207E11
Chromosome17 (Build37)
Map Location 25,421,456 - 25,422,150
singlet/doubletsinglet
Overlap genenone
Upstream geneAbca17, Abca3, Rnps1, Dci, Dnase1l2, E4f1, 1700012G19Rik, Gbl, 9930021D14Rik, LOC666299, Caskin1, Traf7, Rab26, Pkd1, Tsc2, Nthl1, Slc9a3r2, Npw, Zfp598, Syngr3, Gfer, Noxo1, Tbl3, Rnf151, Rps2, Snora64, Ndufb10, Rpl3l, Sepx1, Hs3st6, 4930528F23Rik, Fahd1, Hagh, Igfals, Nubp2, Spsb3, Mrps34, Nme3, Mapk8ip3, Hn1l, Cramp1l, Ift140, BC054438, Telo2, 1110018H23Rik, Clcn7, Gm317, BC003965, Unkl, Gnptg, 0610007P22Rik, Ube2i
Downstream genePrss34, Prss28, Prss29, LOC432543, LOC666472, Tpsab1, Mcpt6, Tpsg1, Cacna1h, Tekt4, Sstr5, LOC100042580, Sox8, Tmem112, LOC545396, Gng13, Chtf18, Rpusd1, BC052484, Msln, Narfl, Haghl, Ccdc78, BC008155, Metrn, Fbxl16, Wdr24, 2610003J06Rik, Stub1, Rhbdl1, Rhot2, Wdr90, 9530058B02Rik, 0610011F06Rik, Wfikkn1, Rab40c, LOC100043160, Pigq, F430201B04Rik, D630044L22Rik, Solh, 1700022N22Rik, Rab11fip3, Decr2, Nme4, EG666609, Tmem8, Mrpl28, Axin1, Pdia2, Arhgdig, Rgs11, Itfg3, LOC100042643, Luc7l, EG383229
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-207E11.bB6Ng01-207E11.g
ACCGA026478GA026479
length1,220700
definitionB6Ng01-207E11.b B6Ng01-207E11.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctacaccttcatctgaaggctgctagtggaagactggtttccagg
cagctaggacaagggtattaaagctcactccccacagtgacacacctact
ccaacaaggccacacctccaaatagtgccactccctgggtcaagcatata
caaaccatcacacccattcgctttaaaaatccagaatctttttaaaaggt
caaagtctttcagctgtgggctactgtaaaaataaaaatgaagttagatt
ccttcttcaagaaggaagaactacggcactgccatactctgaacaaacca
ttaacagtgtaagtaactcaatgcccagttatctggggttcacttatgat
cttctgggctcctctaggtggcttgggtcacttctctggttctgccctct
acagtacacacagtgagtcttctaggctctggctggctccactccaccgc
tgctgctgttcttggtggtcatccaatagtactggcatctccaaaactgc
tggggtcccttgctgcaactggactgcagcttcaccaataacctctcctg
ggctctcttcagggattccagccctgctacacagtgacaagcttcagctg
ctctccgtgacccctttatgcctttaaaaccagtaccacctgggtgactc
ttacattaccaccaagtttgactgcctctggaacacagcttctatgtgct
gaccctgaagaaatacttcccacaaggcttcacctccatgatgctggtct
tttcttaaccacaacggactctttagccccagctggccaacattcatggt
tccagcaaagcaaacgttttacttcagtggttaccctgccttgttaatca
cagctgattctttgaccagatactgaagactcttcatagaaatggcccag
tgaagtctttgctctttccctctgaaacttcccaagtcaggcctccacca
tctgcactgcttgctctcacattcttatctcaagctcacaaagcagccca
ctgagctctcacactcatggcctctctagctaaaagttcccaagtccttc
acatcctcccggaaacagaacgatccagtcgttcacagcagaaccccgct
attccagtacagctccgtctcagcagggaccccgctattccggtacagct
tcctgggtagggttgcttgagatcaccgacgaagcactgtaaagtaaggt
tcctatcatcacacgattca
gaattcccctaactgacgataaaggctgggcctgtgggcccaccagaggt
ctccattctcaaacggggagaccctgcatgcaggaatttcagctgaataa
acactctttgcttttgcatactatttgagtctggggtatcattcttcagt
gattcttggatcctaacaaggacgagctgagcaattcaatcagaggctga
gaaacaagcaagattacatgagtcagtttgaagaggagttttgagccaga
atggctgagttgaaccaaccagccagagttcagaaagagctagaaagggt
gagcttattcagcagtaagcctcccagatgacaatgacatctggttaata
agagatacttttatagtgatgtgtgtgtgtgtctgtgtgtgtgtgctcgc
gagcacactcacgcgagttctctctcacaagtgcctgagttttagcagca
cttctctatggcaagacagtatgccttaggtgtgaggcccattcaaaaga
atcaaagtttaaaaaatggtctgagaggagggtgggggaagaaatagaaa
tcacttttttctagaaagccaccagtttcccagaataggtttatgggaaa
gacaaacatgtctcaatgcaccttggaaggtgcctaggtttggcatctgg
ttctctagaaggcatgtagcgtttggctctctgctgccccctgaatggat

quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_25421456_25422150
seq2: B6Ng01-207E11.g_65_764

seq1  GAATTCCCCTAACTGACGATAAAGGCTGGGCCTGTGGGCCCACCAGAGGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCCTAACTGACGATAAAGGCTGGGCCTGTGGGCCCACCAGAGGT  50

seq1  CTCCATTCTCAAACGGGGAGACCCTGCATGCAGGAATTTCAGCTGAATAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCATTCTCAAACGGGGAGACCCTGCATGCAGGAATTTCAGCTGAATAA  100

seq1  ACACTCTTTGCTTTTGCATACTATTTGAGTCTGGGGTATCATTCTTCAGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTCTTTGCTTTTGCATACTATTTGAGTCTGGGGTATCATTCTTCAGT  150

seq1  GATTCTTGGATCCTAACAAGGACGAGCTGAGCAATTCAATCAGAGGCTGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTCTTGGATCCTAACAAGGACGAGCTGAGCAATTCAATCAGAGGCTGA  200

seq1  GAAACAAGCAAGATTACATGAGTCAGTTTGAAGAGGAGTTTTGAGCCAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACAAGCAAGATTACATGAGTCAGTTTGAAGAGGAGTTTTGAGCCAGA  250

seq1  ATGGCTGAGTTGAACCAACCAGCCAGAGTTCAGAAAGAGCTAGAAAGGGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGCTGAGTTGAACCAACCAGCCAGAGTTCAGAAAGAGCTAGAAAGGGT  300

seq1  GAGCTTATTCAGCAGTAAGCCTCCCAGATGACAATGACATCTGGTTAATA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCTTATTCAGCAGTAAGCCTCCCAGATGACAATGACATCTGGTTAATA  350

seq1  AGAGATACTTTTATAGTGATGTGTGTGTGTGTCTGTGTGTGTGTGCTCGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGATACTTTTATAGTGATGTGTGTGTGTGTCTGTGTGTGTGTGCTCGC  400

seq1  GAGCACACTCACGCGAGTTCTCTCTCACAAGTGCCTGAGTTTTAGCAGCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCACACTCACGCGAGTTCTCTCTCACAAGTGCCTGAGTTTTAGCAGCA  450

seq1  CTTCTCTATGGCAAGACAGTATGCCTTAGGTGTGAGGCCCATTCAAAAGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTCTATGGCAAGACAGTATGCCTTAGGTGTGAGGCCCATTCAAAAGA  500

seq1  ATCAAAGTTTAAAAAATGGTCTGAGAGGAGGGTGGGGGAAGAAATAGAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAAAGTTTAAAAAATGGTCTGAGAGGAGGGTGGGGGAAGAAATAGAAA  550

seq1  TCAC-TTTTTCAAGAAAGCCACCAGTTT-CCAGAATAGGTTTATGGG-AA  597
      |||| |||||| |||||||||||||||| |||||||||||||||||| ||
seq2  TCACTTTTTTCTAGAAAGCCACCAGTTTCCCAGAATAGGTTTATGGGAAA  600

seq1  GACAAACATGCCTCAATGCACCTTGGAAGGTGCCTAGGTTTGGCATCTGG  647
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  GACAAACATGTCTCAATGCACCTTGGAAGGTGCCTAGGTTTGGCATCTGG  650

seq1  TTCCCTAGAAGGCATGCAGCG-TTGGCTCTCTGCTGCCCCCTG-ATGGAT  695
      ||| |||||||||||| |||| ||||||||||||||||||||| ||||||
seq2  TTCTCTAGAAGGCATGTAGCGTTTGGCTCTCTGCTGCCCCCTGAATGGAT  700