BAC Information

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BAC

Clone NameB6Ng01-207H09
Chromosome17 (Build37)
Map Location 22,851,866 - 22,852,431
singlet/doubletsinglet
Overlap genenone
Upstream geneZfp760, BC043476, 4930515G13Rik, 2610036F08Rik, LOC624960, 3110048L19Rik, 4930432O21Rik, LOC665820, LOC665825, LOC674332, LOC631010, EG665844, EG210853, LOC671007, EG240038, EG631624, 6330416L07Rik, Zfp758, 1300003B13Rik, EG210876, LOC100042656, EG628185, ENSMUSG00000046088
Downstream geneEG383218, EG433078, LOC100042679, A630033E08Rik, LOC671128, LOC665961, EG434701, LOC665976, LOC100042225, LOC100042234, EG665988, LOC100042248, Zfp40, LOC100042257, LOC100042261, Vmn2r-ps133, EG666002, EG638102, EG619697, EG619775, EG619788, Olfr752-ps1, EG666030, EG381070, Zfp213, Zfp13, Zscan10, LOC666062, Mmp25, LOC665757, BC038613, Thoc6, Hcfc1r1, Tnfrsf12a, Cldn6, Cldn9, EG666080, 1520401A03Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-207H09.bB6Ng01-207H09.g
ACCGA026606GA026607
length1,1441,195
definitionB6Ng01-207H09.b B6Ng01-207H09.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctctgatgacttctgagactacttttttgggtaaagcatttgtca
cattcactacatttgtaaggtttctctcctgtgtgaattgtttgatgtct
tctaagactgcctttctcagtaaaccattttccacattcattacatttgt
aaggcttctctcctgtatgaattctctgatgcactgtaagaaggcatttc
agggtaaaggttttgccacattcactacatttgaaaggtttctctcctgt
atgaattatttgatgacttctgagacttcctctttcagtaaagcattttt
tgcattcactacatttgtaaggtttctctcctgtatgcattctctgatga
attgtaagttggtatttctgggcaaagcatttgtcacattcattacattt
ataaggtttctctccagtatgagttctctgatgacttctaagactgcctt
tctcagtaaaacacttttcacattcactacattggtaaggtttttcatct
gtgtgaattctttgatgaatgacaagacttcttttccgagtaaaccattt
gtcacatgcactacattggtaaggtttctctcctgtatgaattctcagat
gaatactaagactgcttttgtggttaaagcatttgtcacattcaatacat
ttataaggtttccgtcctgcatgaattctctgatgacttctaagactgct
ttttgcagtaaagcatttgtcacattcaatacatttgtaaggtttgtctc
ctgtatgaattctcatatgaataacaagactgcatttttgagtaaagcat
ttgtgacactcactacattcataaggtttctctcccgtatgaattcgttg
atgacttctaagattggaattcttgataaaagacatgtcacattcactac
atttgtaaggtttgtctcctgtgtgaattctctgatgaactggtaagttg
ggtatttctggggaaagcattttctcacattcattacattttgtagcttc
tctcctgtgtgacttcttcttgatgtttttctaatttgcgagtagtagat
aaagattgcacaatgactgcatttgtaagtatgcacgagggtggatcctc
tcatgtttttaagctgatatattataaaggcattaaccattgca
gaattcatacaggagagaaaccttacaaatgtagtaaatgtgataaatct
tttaccaagaaagactgtcttaaaattcatcagataattcatacaggcga
agaaccttacaaatgtagtgaatgtgacacatcctttaaccggaaagacc
atcttagaactcatcagagatttcacacaggagagagaatttacaaatgt
agtgaatgtgatgaatcctttacccagaaaattaatctaagaattcatca
gaaaattcatacaggagacaactcttacaaatgtagtggatgtgacaaat
cctttaaccggagaaaccatcttagaactcatgagagaattcatgccgga
gaaaagccttacaattgtagggaatttgaaaattcctttatccagactgg
ctctcttagaattcatcagagacttcattcaagaaagaaactttacaaat
gcagggaatgtgacaaatcctttactagcagctcatatgtcagaatacat
cagagaattcattcaggagagaaaccttacaaatgtagtgagtgtggcaa
atgcttcactagtggctcatatcttagaatgcaccaaagaattcatacag
gagacaaaccttacaaatgtagtgactgtgataaatgctttactcagaaa
tgcagtcttagaattcaccagagaagtcatacaggagagaaaccttacaa
atgtggtaattgcgacagatcttttacaagtggctcatatcttagaattc
atcagagaattcatagaggtgagaaacctcataaatgtagtgaatgtgac
aaatcctttacccagaaaggctatcttagaattcatcagagaattcataa
aggagaaaaatctcacaaaggtagttagtgtgaaaaatcctttacccaga
aaccctaacttgtgtacctttttcaaagaattcatataggaaaaaaaaac
ttaaatataggggaatatagcaaatcccttcacaggaaaactgttcttag
aaccttttcagaaatttcatacagtaataaaaacaatacaaatgtaagga
aatcctgataaatttttacccagaaagctgtcttagaattccatgagaac
ttcattcaagaaagaagcctttataaatgtgacatcttaccagacgactt
atcttagaccttgacggaaagataactgggagagagaaaaccttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_22851866_22852431
seq2: B6Ng01-207H09.b_627_1186

seq1  GTATGAATTCTCAGATGAATACTAAGACTGCTTTTGTGGTTAAAGCATTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATGAATTCTCAGATGAATACTAAGACTGCTTTTGTGGTTAAAGCATTT  50

seq1  GTCACATTCAATACATTTATAAGGTTTCCGTCCTGCATGAATTCTCTGAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCACATTCAATACATTTATAAGGTTTCCGTCCTGCATGAATTCTCTGAT  100

seq1  GACTTCTAAGACTGCTTTTTGCAGTAAAGCATTTGTCACATTCAATACAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTCTAAGACTGCTTTTTGCAGTAAAGCATTTGTCACATTCAATACAT  150

seq1  TTGTAAGGTTTGTCTCCTGTATGAATTCTCATATGAATAACAAGACTGCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTAAGGTTTGTCTCCTGTATGAATTCTCATATGAATAACAAGACTGCA  200

seq1  TTTTTGAGTAAAGCATTTGTGACACTCACTACATTCATAAGGTTTCTCTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTGAGTAAAGCATTTGTGACACTCACTACATTCATAAGGTTTCTCTC  250

seq1  CCGTATGAATTCGTTGATGACTTCTAAGATTGGAATTCTTGATAAAAGAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGTATGAATTCGTTGATGACTTCTAAGATTGGAATTCTTGATAAAAGAC  300

seq1  ATGTCACATTCACTACATTTGTAAGGTTTGTCTCCTGTGTGAATTCTCTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCACATTCACTACATTTGTAAGGTTTGTCTCCTGTGTGAATTCTCTG  350

seq1  ATGAACT-GTAAGTT-GGTATTTCTGGGGAAAGCA-TTTCTCACATTCAT  397
      ||||||| ||||||| ||||||||||||||||||| ||||||||||||||
seq2  ATGAACTGGTAAGTTGGGTATTTCTGGGGAAAGCATTTTCTCACATTCAT  400

seq1  TACA-TTTGTAAGGTTTCTCTCCTGTGTGACTTCT--CTGATG-TTTTCT  443
      |||| ||||||  | ||||||||||||||||||||   ||||| ||||||
seq2  TACATTTTGTA--GCTTCTCTCCTGTGTGACTTCTTCTTGATGTTTTTCT  448

seq1  AATTTGCGAGTAGTAGATAAAAGATTTGCCACAATGACTGCATTTGTAAG  493
      |||||||||||||||||| |||||||   |||||||||||||||||||||
seq2  AATTTGCGAGTAGTAGAT-AAAGATT--GCACAATGACTGCATTTGTAAG  495

seq1  TATTGCCACGAGGGTGGATCCTCTCATGTTTTTTAAAGCCTGATATATTA  543
      |||   |||||||||||||||||||||||||||  ||| |||||||||||
seq2  TAT--GCACGAGGGTGGATCCTCTCATGTTTTT--AAG-CTGATATATTA  540

seq1  TAAAAGCATTTACCACATTTGCA  566
      |||| ||||| ||||   |||||
seq2  TAAAGGCATTAACCA---TTGCA  560