BAC Information

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BAC

Clone NameB6Ng01-208P07
Chromosome17 (Build37)
Map Location 26,072,618 - 26,073,070
singlet/doubletsinglet
Overlap genePigq
Upstream geneMapk8ip3, Hn1l, Cramp1l, Ift140, BC054438, Telo2, 1110018H23Rik, Clcn7, Gm317, BC003965, Unkl, Gnptg, 0610007P22Rik, Ube2i, Prss34, Prss28, Prss29, LOC432543, LOC666472, Tpsab1, Mcpt6, Tpsg1, Cacna1h, Tekt4, Sstr5, LOC100042580, Sox8, Tmem112, LOC545396, Gng13, Chtf18, Rpusd1, BC052484, Msln, Narfl, Haghl, Ccdc78, BC008155, Metrn, Fbxl16, Wdr24, 2610003J06Rik, Stub1, Rhbdl1, Rhot2, Wdr90, 9530058B02Rik, 0610011F06Rik, Wfikkn1, Rab40c, LOC100043160
Downstream geneF430201B04Rik, D630044L22Rik, Solh, 1700022N22Rik, Rab11fip3, Decr2, Nme4, EG666609, Tmem8, Mrpl28, Axin1, Pdia2, Arhgdig, Rgs11, Itfg3, LOC100042643, Luc7l, EG383229, EG240055, C230078M08Rik, Dusp1, EG666668, Ergic1, Atp6v0e, A930001N09Rik, Bnip1, Nkx2-5, Kifc1, Phf1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-208P07.bB6Ng01-208P07.g
ACCGA027698GA027699
length1,041448
definitionB6Ng01-208P07.b B6Ng01-208P07.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctgggaacttttcagagggtatgtaagtgttagagcccctacagg
cattgttggggaatggagattgcagtttgacagtagtcatgatccaaaaa
caaaaaaacaaggtgaagcctggcatggtggcacacgcctttaatcccag
aacttgggaggccgaggcaggcggatttctgagttccaggacagccaagg
ctatacagagaaaccctgtctcgagggaaaaaaagggggagggaattaga
ttcagatctctgccagttccccttccctcacatccctgccttccacactc
tctctctctctcccccctctattctttcctgtttagtgatatggagtaaa
actggtgggggcgcggataaagggtagaaaaacaaagaacctataaagta
gcaaagaagaaacaaaaagaaattagattctgagatctttatctctctct
ttcctctctagtctttctctcctgtctagtgatagaggagaaaccaaggg
tgggaaaaagaagaattcaccaaagtagcaaaaaccagatacaattcact
gatgccccaaacaaagccaccagcacaggagcctactgtgtcccatgaag
gggcatgtctatactgagctagaacacagtccagagatcttaaccagagc
caagtgcattgtattactccagaaactgaggcaggagaatcaggaatttg
ctatcagcttaggctacattgtaagaccctgtgtgaacacaaaagcagta
agaatgtgaggttagctgaggttactttgtggcaccctgagagggctggg
gagtagggaagggcaccttgaccagaaaagggaatagtagtattaactca
gttactgtcatttggggatgatttcatactgacaggacaacagtctatta
gacaatagattacacaaagtatactagcatcctttttattttgagctttt
gttttttgttgactaattgggttttttggttttttttttaaagttattct
atggttaatgaacaattttacgggcgggtgtgctggaggtg
ctcacaaaggaagcattgagacatttccacagatgctcacatagtaagag
atgtcttcaagccaaggaagaagaaaatacctgatagcaattggcttgtg
tgaaacagagcagggtcaaggaaagagcagcagcgccgggcgtggtggca
cacgcctttaatcccagcacttgggaggcagaggcaggcggatttctaag
ttcgaggccagcctggtctaccaagtgagttccaggacagccagggctac
acagagaaaccctgtctcgaaaaaccaaaacaaacaacaaaaaaagagcc
tagtgttactcagcattctgaggacttaaggacttttccattttgcatta
ttacctgaagccagctgtgggaaaaacagaaaagatggggaatgggcagc
tctgtgtcctcatgggtcaacccaggtggggcagatattggcctttat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_26072618_26073070
seq2: B6Ng01-208P07.g_64_516

seq1  GAATTCCTCACAAAGGAAGCATTGAGACATTTCCACAGATGCTCACATAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTCACAAAGGAAGCATTGAGACATTTCCACAGATGCTCACATAG  50

seq1  TAAGAGATGTCTTCAAGCCAAGGAAGAAGAAAATACCTGATAGCAATTGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGAGATGTCTTCAAGCCAAGGAAGAAGAAAATACCTGATAGCAATTGG  100

seq1  CTTGTGTGAAACAGAGCAGGGTCAAGGAAAGAGCAGCAGCGCCGGGCGTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTGTGAAACAGAGCAGGGTCAAGGAAAGAGCAGCAGCGCCGGGCGTG  150

seq1  GTGGCACACGCCTTTAATCCCAGCACTTGGGAGGCAGAGGCAGGCGGATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGCACACGCCTTTAATCCCAGCACTTGGGAGGCAGAGGCAGGCGGATT  200

seq1  TCTAAGTTCGAGGCCAGCCTGGTCTACCAAGTGAGTTCCAGGACAGCCAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAAGTTCGAGGCCAGCCTGGTCTACCAAGTGAGTTCCAGGACAGCCAG  250

seq1  GGCTACACAGAGAAACCCTGTCTCGAAAAACCAAAACAAACAACAAAAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTACACAGAGAAACCCTGTCTCGAAAAACCAAAACAAACAACAAAAAA  300

seq1  AGAGCCTAGTGTTACTCAGCATTCTGAGGACTTAAGGACTTTTCCATTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCCTAGTGTTACTCAGCATTCTGAGGACTTAAGGACTTTTCCATTTT  350

seq1  GCATTATTACCTGAAGCCAGCTGTGGGAAAAACAGAAAAGAAGGGGAATG  400
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  GCATTATTACCTGAAGCCAGCTGTGGGAAAAACAGAAAAGATGGGGAATG  400

seq1  GGCAGCTCTGTGTCCTCATGGGTCAACCCAGGTGGGGCAGATATTGGCCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGCTCTGTGTCCTCATGGGTCAACCCAGGTGGGGCAGATATTGGCCT  450

seq1  TTA  453
      |||
seq2  TTA  453